Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AF228730.3-201ENST00000436691 102 ntBASIC0.27□□□□□ -2.37
CXCL12P48061 RNU7-53P-201ENST00000516705 60 ntBASIC0.27□□□□□ -2.37
CXCL12P48061 AP003327.1-201ENST00000529684 127 ntBASIC0.27□□□□□ -2.37
CXCL12P48061 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.27□□□□□ -2.37
CXCL12P48061 AC006006.1-201ENST00000603082 144 ntBASIC0.27□□□□□ -2.37
CXCL12P48061 AC008608.1-201ENST00000603910 127 ntBASIC0.27□□□□□ -2.37
CXCL12P48061 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.26□□□□□ -2.37
CXCL12P48061 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.26□□□□□ -2.37
CXCL12P48061 RNU6-888P-201ENST00000363010 101 ntBASIC0.26□□□□□ -2.37
CXCL12P48061 Y_RNA.138-201ENST00000363462 102 ntBASIC0.26□□□□□ -2.37
CXCL12P48061 Y_RNA.216-201ENST00000364205 93 ntBASIC0.26□□□□□ -2.37
CXCL12P48061 Y_RNA.229-201ENST00000364347 113 ntBASIC0.26□□□□□ -2.37
CXCL12P48061 SNORA63C-201ENST00000364578 129 ntBASIC0.26□□□□□ -2.37
CXCL12P48061 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
CXCL12P48061 Y_RNA.455-201ENST00000384230 98 ntBASIC0.26□□□□□ -2.37
CXCL12P48061 RNU6-679P-201ENST00000391003 106 ntBASIC0.26□□□□□ -2.37
CXCL12P48061 RNU6-1165P-201ENST00000410119 107 ntBASIC0.26□□□□□ -2.37
CXCL12P48061 MIR18B-201ENST00000454574 71 ntBASIC0.26□□□□□ -2.37
CXCL12P48061 MTND5P22-201ENST00000458380 195 ntBASIC0.26□□□□□ -2.37
CXCL12P48061 AL117351.2-201ENST00000513571 157 ntBASIC0.26□□□□□ -2.37
CXCL12P48061 RNU6-365P-201ENST00000517113 106 ntBASIC0.26□□□□□ -2.37
CXCL12P48061 AP003733.2-201ENST00000529409 171 ntBASIC0.26□□□□□ -2.37
CXCL12P48061 AC113195.1-201ENST00000579952 141 ntBASIC0.26□□□□□ -2.37
CXCL12P48061 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.26□□□□□ -2.37
CXCL12P48061 MIR6718-201ENST00000616153 80 ntBASIC0.26□□□□□ -2.37
CXCL12P48061 MIRLET7D-201ENST00000362263 87 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 Y_RNA.7-201ENST00000362352 102 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 Y_RNA.128-201ENST00000363391 112 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 Y_RNA.158-201ENST00000363651 101 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 SNORA1.1-201ENST00000364671 133 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 Y_RNA.276-201ENST00000364732 109 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 RNU6-211P-201ENST00000384047 107 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 SNORD12C-201ENST00000386307 89 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 AL731563.1-201ENST00000442202 214 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 RNU7-102P-201ENST00000458948 62 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 RNU2-11P-201ENST00000459191 187 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 snoU13.2-201ENST00000459201 104 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 RNU7-185P-201ENST00000459215 60 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 AC002350.1-201ENST00000490759 375 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 SCARNA24.2-201ENST00000516968 130 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 Y_RNA.711-201ENST00000516993 102 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 AC092634.7-201ENST00000621022 103 ntBASIC0.25□□□□□ -2.37
CXCL12P48061 UBE2WP1-201ENST00000362030 340 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 Y_RNA.66-201ENST00000362862 102 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 Y_RNA.84-201ENST00000363011 104 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 Y_RNA.91-201ENST00000363042 107 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 Y_RNA.117-201ENST00000363294 101 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 RNU4-45P-201ENST00000365469 141 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 Y_RNA.460-201ENST00000384255 102 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 RNU6-364P-201ENST00000384387 107 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 RNU6-1289P-201ENST00000384431 106 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 SNORA8.3-201ENST00000384679 139 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 MIR626-201ENST00000385032 94 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 MIR125B2-201ENST00000385128 89 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 RNU6-504P-201ENST00000516568 104 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 MIR5688-201ENST00000580619 83 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 AC067863.3-201ENST00000624172 122 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 AC134503.1-201ENST00000633048 54 ntBASIC0.24□□□□□ -2.37
CXCL12P48061 MIR342-201ENST00000362212 99 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNA5SP517-201ENST00000364724 117 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 Y_RNA.634-201ENST00000364811 113 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 Y_RNA.476-201ENST00000384347 108 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 MIR563-201ENST00000385080 79 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 MT-TT-201ENST00000387460 66 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU6-1319P-201ENST00000390855 104 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU6-747P-201ENST00000390928 104 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 SNORD77.3-201ENST00000391113 65 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU6-241P-201ENST00000391148 104 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 MIR548P-201ENST00000408336 84 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 MIR548I3-201ENST00000408378 149 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 MIR1257-201ENST00000408490 117 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 SNORD100-201ENST00000408573 76 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU6-447P-201ENST00000410293 104 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU6-1118P-201ENST00000410382 104 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU6-1076P-201ENST00000410397 104 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU6-355P-201ENST00000410427 104 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU6-791P-201ENST00000410467 104 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU6-705P-201ENST00000410601 104 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU6-1100P-201ENST00000410691 104 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU6-860P-201ENST00000410860 104 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU6-1217P-201ENST00000411276 104 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU6-785P-201ENST00000411324 104 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 MTND4LP11-201ENST00000422184 280 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU7-96P-201ENST00000459535 64 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 TRBVB-201ENST00000477100 408 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 SERF1AP1-201ENST00000514575 187 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU6-998P-201ENST00000515894 101 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU6-1299P-201ENST00000516316 100 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU6-126P-201ENST00000516685 103 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU6-1137P-201ENST00000517073 99 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 RNU7-156P-201ENST00000517214 74 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 MIR4680-201ENST00000580906 66 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 AC090897.1-201ENST00000580909 226 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 U6.90-201ENST00000614007 104 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 U6.70-201ENST00000620287 104 ntBASIC0.23□□□□□ -2.37
CXCL12P48061 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms