Protein–RNA interactions for Protein: P39748

FEN1, Flap endonuclease 1, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FEN1P39748 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
FEN1P39748 MT-TN-201ENST00000387400 73 ntBASIC0.76□□□□□ -2.29
FEN1P39748 RNU6-205P-201ENST00000390858 107 ntBASIC0.76□□□□□ -2.29
FEN1P39748 SNORD89-201ENST00000390981 114 ntBASIC0.76□□□□□ -2.29
FEN1P39748 SNORA79-201ENST00000408376 140 ntBASIC0.76□□□□□ -2.29
FEN1P39748 RNU6-994P-201ENST00000410507 111 ntBASIC0.76□□□□□ -2.29
FEN1P39748 RNU4-43P-201ENST00000410628 137 ntBASIC0.76□□□□□ -2.29
FEN1P39748 Y_RNA.626-201ENST00000411288 95 ntBASIC0.76□□□□□ -2.29
FEN1P39748 RNU2-64P-201ENST00000411315 191 ntBASIC0.76□□□□□ -2.29
FEN1P39748 AL606490.4-201ENST00000423117 127 ntBASIC0.76□□□□□ -2.29
FEN1P39748 AC244023.1-201ENST00000426884 112 ntBASIC0.76□□□□□ -2.29
FEN1P39748 AL035398.1-201ENST00000430869 322 ntBASIC0.76□□□□□ -2.29
FEN1P39748 AL121914.1-201ENST00000450188 156 ntBASIC0.76□□□□□ -2.29
FEN1P39748 AL138752.1-201ENST00000452964 351 ntBASIC0.76□□□□□ -2.29
FEN1P39748 U7.7-201ENST00000459276 60 ntBASIC0.76□□□□□ -2.29
FEN1P39748 PSMC1P5-201ENST00000512850 177 ntBASIC0.76□□□□□ -2.29
FEN1P39748 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
FEN1P39748 RNU7-53P-201ENST00000516705 60 ntBASIC0.76□□□□□ -2.29
FEN1P39748 AP000753.3-201ENST00000604083 169 ntBASIC0.76□□□□□ -2.29
FEN1P39748 AC242498.1-201ENST00000604134 111 ntBASIC0.76□□□□□ -2.29
FEN1P39748 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
FEN1P39748 Y_RNA.7-201ENST00000362352 102 ntBASIC0.75□□□□□ -2.29
FEN1P39748 Y_RNA.60-201ENST00000362831 98 ntBASIC0.75□□□□□ -2.29
FEN1P39748 Y_RNA.193-201ENST00000363979 102 ntBASIC0.75□□□□□ -2.29
FEN1P39748 RNU6-1335P-201ENST00000365426 107 ntBASIC0.75□□□□□ -2.29
FEN1P39748 Y_RNA.447-201ENST00000384184 113 ntBASIC0.75□□□□□ -2.29
FEN1P39748 RNU6-578P-201ENST00000390980 103 ntBASIC0.75□□□□□ -2.29
FEN1P39748 RNU6-1023P-201ENST00000516137 106 ntBASIC0.75□□□□□ -2.29
FEN1P39748 MIR3149-201ENST00000584629 83 ntBASIC0.75□□□□□ -2.29
FEN1P39748 AL078603.1-201ENST00000603824 313 ntBASIC0.75□□□□□ -2.29
FEN1P39748 RNU2-4P-201ENST00000606190 192 ntBASIC0.75□□□□□ -2.29
FEN1P39748 MIR377-201ENST00000362145 69 ntBASIC0.74□□□□□ -2.29
FEN1P39748 Y_RNA.307-201ENST00000365022 117 ntBASIC0.74□□□□□ -2.29
FEN1P39748 Y_RNA.452-201ENST00000384202 108 ntBASIC0.74□□□□□ -2.29
FEN1P39748 MIR608-201ENST00000384820 100 ntBASIC0.74□□□□□ -2.29
FEN1P39748 MIR100-201ENST00000385259 80 ntBASIC0.74□□□□□ -2.29
FEN1P39748 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
FEN1P39748 AC006461.1-201ENST00000412637 326 ntBASIC0.74□□□□□ -2.29
FEN1P39748 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.74□□□□□ -2.29
FEN1P39748 HMGN1P33-201ENST00000432945 451 ntBASIC0.74□□□□□ -2.29
FEN1P39748 AC067940.1-201ENST00000458411 300 ntBASIC0.74□□□□□ -2.29
FEN1P39748 RNU2-11P-201ENST00000459191 187 ntBASIC0.74□□□□□ -2.29
FEN1P39748 RNU7-96P-201ENST00000459535 64 ntBASIC0.74□□□□□ -2.29
FEN1P39748 RNU6-998P-201ENST00000515894 101 ntBASIC0.74□□□□□ -2.29
FEN1P39748 RNU6-111P-201ENST00000517179 105 ntBASIC0.74□□□□□ -2.29
FEN1P39748 MIR4308-201ENST00000580634 81 ntBASIC0.74□□□□□ -2.29
FEN1P39748 MIR3129-201ENST00000581095 76 ntBASIC0.74□□□□□ -2.29
FEN1P39748 MIR4264-201ENST00000583520 66 ntBASIC0.74□□□□□ -2.29
FEN1P39748 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
FEN1P39748 AC108706.1-201ENST00000611053 297 ntBASIC0.74□□□□□ -2.29
FEN1P39748 MIR376A2-201ENST00000636782 80 ntBASIC0.74□□□□□ -2.29
FEN1P39748 Z97988.1-201ENST00000637697 135 ntBASIC0.74□□□□□ -2.29
FEN1P39748 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
FEN1P39748 SNORA20.1-201ENST00000364790 130 ntBASIC0.73□□□□□ -2.29
FEN1P39748 RNU6-463P-201ENST00000384340 107 ntBASIC0.73□□□□□ -2.29
FEN1P39748 Y_RNA.542-201ENST00000384641 111 ntBASIC0.73□□□□□ -2.29
FEN1P39748 SNORD38B-201ENST00000384690 67 ntBASIC0.73□□□□□ -2.29
FEN1P39748 Y_RNA.797-201ENST00000515977 94 ntBASIC0.73□□□□□ -2.29
FEN1P39748 RNU4-71P-201ENST00000516258 113 ntBASIC0.73□□□□□ -2.29
FEN1P39748 RNU6-1110P-201ENST00000516462 101 ntBASIC0.73□□□□□ -2.29
FEN1P39748 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
FEN1P39748 7SK.10-201ENST00000621414 298 ntBASIC0.73□□□□□ -2.29
FEN1P39748 SNORD38B-202ENST00000625943 69 ntBASIC0.73□□□□□ -2.29
FEN1P39748 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
FEN1P39748 MIR342-201ENST00000362212 99 ntBASIC0.72□□□□□ -2.29
FEN1P39748 Y_RNA.121-201ENST00000363309 113 ntBASIC0.72□□□□□ -2.29
FEN1P39748 Y_RNA.351-201ENST00000365436 96 ntBASIC0.72□□□□□ -2.29
FEN1P39748 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.72□□□□□ -2.29
FEN1P39748 RNU6-1190P-201ENST00000410811 104 ntBASIC0.72□□□□□ -2.29
FEN1P39748 Y_RNA.618-201ENST00000410949 107 ntBASIC0.72□□□□□ -2.29
FEN1P39748 snoU13.21-201ENST00000459368 105 ntBASIC0.72□□□□□ -2.29
FEN1P39748 MIR6734-201ENST00000621166 68 ntBASIC0.72□□□□□ -2.29
FEN1P39748 MIR1-1-201ENST00000362147 71 ntBASIC0.71□□□□□ -2.3
FEN1P39748 RNU6-1292P-201ENST00000383856 107 ntBASIC0.71□□□□□ -2.3
FEN1P39748 Y_RNA.571-201ENST00000384753 98 ntBASIC0.71□□□□□ -2.3
FEN1P39748 MIR605-201ENST00000385078 83 ntBASIC0.71□□□□□ -2.3
FEN1P39748 MIR548I3-201ENST00000408378 149 ntBASIC0.71□□□□□ -2.3
FEN1P39748 MIR1827-201ENST00000408549 66 ntBASIC0.71□□□□□ -2.3
FEN1P39748 AC113410.1-201ENST00000505029 247 ntBASIC0.71□□□□□ -2.3
FEN1P39748 SNORD116-25-201ENST00000516517 92 ntBASIC0.71□□□□□ -2.3
FEN1P39748 MIR378D2-201ENST00000580636 98 ntBASIC0.71□□□□□ -2.3
FEN1P39748 AC025627.3-201ENST00000582078 182 ntBASIC0.71□□□□□ -2.3
FEN1P39748 MIR5197-201ENST00000583721 112 ntBASIC0.71□□□□□ -2.3
FEN1P39748 AL353765.1-201ENST00000605514 183 ntBASIC0.71□□□□□ -2.3
FEN1P39748 AL162730.1-201ENST00000605734 292 ntBASIC0.71□□□□□ -2.3
FEN1P39748 AL136317.1-201ENST00000612653 226 ntBASIC0.71□□□□□ -2.3
FEN1P39748 Y_RNA.144-201ENST00000363521 113 ntBASIC0.7□□□□□ -2.3
FEN1P39748 Y_RNA.182-201ENST00000363880 111 ntBASIC0.7□□□□□ -2.3
FEN1P39748 RNY1-201ENST00000364228 113 ntBASIC0.7□□□□□ -2.3
FEN1P39748 RNU6-978P-201ENST00000364371 103 ntBASIC0.7□□□□□ -2.3
FEN1P39748 SNORA1.1-201ENST00000364671 133 ntBASIC0.7□□□□□ -2.3
FEN1P39748 RNU6-934P-201ENST00000365154 107 ntBASIC0.7□□□□□ -2.3
FEN1P39748 RNU4-70P-201ENST00000384579 139 ntBASIC0.7□□□□□ -2.3
FEN1P39748 RNU6-602P-201ENST00000411155 105 ntBASIC0.7□□□□□ -2.3
FEN1P39748 RNU7-62P-201ENST00000458856 62 ntBASIC0.7□□□□□ -2.3
FEN1P39748 RNA5SP220-201ENST00000516298 104 ntBASIC0.7□□□□□ -2.3
FEN1P39748 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.7□□□□□ -2.3
FEN1P39748 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.7□□□□□ -2.3
FEN1P39748 AL365205.2-201ENST00000594586 68 ntBASIC0.7□□□□□ -2.3
FEN1P39748 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 240.4 ms