Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.13□□□□□ -2.43
SLC6A1P30531 RNU6-597P-201ENST00000365620 102 ntBASIC-0.13□□□□□ -2.43
SLC6A1P30531 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.13□□□□□ -2.43
SLC6A1P30531 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
SLC6A1P30531 RNU7-45P-201ENST00000459460 63 ntBASIC-0.13□□□□□ -2.43
SLC6A1P30531 RNU7-129P-201ENST00000516128 62 ntBASIC-0.13□□□□□ -2.43
SLC6A1P30531 SNORA31.14-201ENST00000516728 116 ntBASIC-0.13□□□□□ -2.43
SLC6A1P30531 MIR5692C2-201ENST00000577959 77 ntBASIC-0.13□□□□□ -2.43
SLC6A1P30531 AL132765.2-201ENST00000610812 351 ntBASIC-0.13□□□□□ -2.43
SLC6A1P30531 MIR6717-201ENST00000622747 73 ntBASIC-0.13□□□□□ -2.43
SLC6A1P30531 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.14□□□□□ -2.43
SLC6A1P30531 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.14□□□□□ -2.43
SLC6A1P30531 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.14□□□□□ -2.43
SLC6A1P30531 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.14□□□□□ -2.43
SLC6A1P30531 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.14□□□□□ -2.43
SLC6A1P30531 MIR643-201ENST00000385267 97 ntBASIC-0.14□□□□□ -2.43
SLC6A1P30531 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.14□□□□□ -2.43
SLC6A1P30531 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.14□□□□□ -2.43
SLC6A1P30531 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.14□□□□□ -2.43
SLC6A1P30531 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.14□□□□□ -2.43
SLC6A1P30531 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.14□□□□□ -2.43
SLC6A1P30531 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.14□□□□□ -2.43
SLC6A1P30531 RNU6-365P-201ENST00000517113 106 ntBASIC-0.14□□□□□ -2.43
SLC6A1P30531 RNA5SP47-201ENST00000517230 109 ntBASIC-0.14□□□□□ -2.43
SLC6A1P30531 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.14□□□□□ -2.43
SLC6A1P30531 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.14□□□□□ -2.43
SLC6A1P30531 MIR6082-201ENST00000613604 109 ntBASIC-0.14□□□□□ -2.43
SLC6A1P30531 U6atac.1-201ENST00000616025 117 ntBASIC-0.14□□□□□ -2.43
SLC6A1P30531 MIR376A1-201ENST00000616574 68 ntBASIC-0.14□□□□□ -2.43
SLC6A1P30531 MIR342-201ENST00000362212 99 ntBASIC-0.15□□□□□ -2.43
SLC6A1P30531 RNU6-403P-201ENST00000363163 104 ntBASIC-0.15□□□□□ -2.43
SLC6A1P30531 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.15□□□□□ -2.43
SLC6A1P30531 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.15□□□□□ -2.43
SLC6A1P30531 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.15□□□□□ -2.43
SLC6A1P30531 MIR760-201ENST00000390220 80 ntBASIC-0.15□□□□□ -2.43
SLC6A1P30531 U8.15-201ENST00000390947 134 ntBASIC-0.15□□□□□ -2.43
SLC6A1P30531 MIR548H2-201ENST00000408874 88 ntBASIC-0.15□□□□□ -2.43
SLC6A1P30531 AC096949.1-201ENST00000412047 152 ntBASIC-0.15□□□□□ -2.43
SLC6A1P30531 AC138393.2-201ENST00000414742 246 ntBASIC-0.15□□□□□ -2.43
SLC6A1P30531 RPL39P25-201ENST00000449384 154 ntBASIC-0.15□□□□□ -2.43
SLC6A1P30531 SNORD19B-201ENST00000459623 84 ntBASIC-0.15□□□□□ -2.43
SLC6A1P30531 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.15□□□□□ -2.43
SLC6A1P30531 RNU6-504P-201ENST00000516568 104 ntBASIC-0.15□□□□□ -2.43
SLC6A1P30531 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.15□□□□□ -2.43
SLC6A1P30531 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.16□□□□□ -2.44
SLC6A1P30531 RNU6-653P-201ENST00000363074 106 ntBASIC-0.16□□□□□ -2.44
SLC6A1P30531 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.16□□□□□ -2.44
SLC6A1P30531 RNU4-10P-201ENST00000364383 140 ntBASIC-0.16□□□□□ -2.44
SLC6A1P30531 RNU6-923P-201ENST00000364753 107 ntBASIC-0.16□□□□□ -2.44
SLC6A1P30531 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.16□□□□□ -2.44
SLC6A1P30531 MIR145-201ENST00000384967 88 ntBASIC-0.16□□□□□ -2.44
SLC6A1P30531 MIR610-201ENST00000385139 96 ntBASIC-0.16□□□□□ -2.44
SLC6A1P30531 RNA5SP237-201ENST00000410414 113 ntBASIC-0.16□□□□□ -2.44
SLC6A1P30531 PMCHL1-202ENST00000423102 261 ntBASIC-0.16□□□□□ -2.44
SLC6A1P30531 RNU6-976P-201ENST00000516086 111 ntBASIC-0.16□□□□□ -2.44
SLC6A1P30531 AP003733.2-201ENST00000529409 171 ntBASIC-0.16□□□□□ -2.44
SLC6A1P30531 RNU4-90P-201ENST00000362773 141 ntBASIC-0.17□□□□□ -2.44
SLC6A1P30531 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.17□□□□□ -2.44
SLC6A1P30531 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.17□□□□□ -2.44
SLC6A1P30531 SNORA2A-201ENST00000383885 135 ntBASIC-0.17□□□□□ -2.44
SLC6A1P30531 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.17□□□□□ -2.44
SLC6A1P30531 RNU6-291P-201ENST00000384720 107 ntBASIC-0.17□□□□□ -2.44
SLC6A1P30531 MIR526A2-201ENST00000390198 65 ntBASIC-0.17□□□□□ -2.44
SLC6A1P30531 SNORA26-201ENST00000391286 122 ntBASIC-0.17□□□□□ -2.44
SLC6A1P30531 RNU6-126P-201ENST00000516685 103 ntBASIC-0.17□□□□□ -2.44
SLC6A1P30531 RNU6-135P-201ENST00000516769 101 ntBASIC-0.17□□□□□ -2.44
SLC6A1P30531 RNU6-765P-201ENST00000516916 99 ntBASIC-0.17□□□□□ -2.44
SLC6A1P30531 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.17□□□□□ -2.44
SLC6A1P30531 AC091304.10-201ENST00000641554 121 ntBASIC-0.17□□□□□ -2.44
SLC6A1P30531 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 RNA5SP128-201ENST00000365305 116 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 SNORD28-201ENST00000384706 75 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 MIR593-201ENST00000384856 100 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.18□□□□□ -2.44
SLC6A1P30531 RNU6-848P-201ENST00000515948 107 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 RNU6-475P-201ENST00000516073 104 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 RNU6-617P-201ENST00000516147 107 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 RNU6-473P-201ENST00000516164 107 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 AC141557.1-201ENST00000540982 400 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 MIR4491-201ENST00000581087 68 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 MIR4639-201ENST00000584938 69 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 AL008718.3-201ENST00000610217 321 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 AC006157.1-201ENST00000611750 366 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 AC007485.1-201ENST00000616755 206 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 MIR376A2-201ENST00000636782 80 ntBASIC-0.18□□□□□ -2.44
SLC6A1P30531 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.19□□□□□ -2.44
SLC6A1P30531 RNU6V-201ENST00000384105 107 ntBASIC-0.19□□□□□ -2.44
SLC6A1P30531 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.19□□□□□ -2.44
SLC6A1P30531 SNORA72.6-201ENST00000384520 129 ntBASIC-0.19□□□□□ -2.44
SLC6A1P30531 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.19□□□□□ -2.44
SLC6A1P30531 SNORD115-46-201ENST00000390982 71 ntBASIC-0.19□□□□□ -2.44
SLC6A1P30531 AC141846.1-201ENST00000568348 142 ntBASIC-0.19□□□□□ -2.44
SLC6A1P30531 MTND5P34-201ENST00000568888 325 ntBASIC-0.19□□□□□ -2.44
SLC6A1P30531 MIR4752-201ENST00000579672 72 ntBASIC-0.19□□□□□ -2.44
SLC6A1P30531 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.19□□□□□ -2.44
SLC6A1P30531 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms