Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 Y_RNA.651-201ENST00000459380 103 ntBASIC1.12□□□□□ -2.23
SHC1P29353 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.12□□□□□ -2.23
SHC1P29353 AC079140.2-201ENST00000506193 142 ntBASIC1.12□□□□□ -2.23
SHC1P29353 RNU2-13P-201ENST00000515909 113 ntBASIC1.12□□□□□ -2.23
SHC1P29353 RNU6-971P-201ENST00000516920 106 ntBASIC1.12□□□□□ -2.23
SHC1P29353 MIR4781-201ENST00000585250 76 ntBASIC1.12□□□□□ -2.23
SHC1P29353 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
SHC1P29353 MIR342-201ENST00000362212 99 ntBASIC1.11□□□□□ -2.23
SHC1P29353 SNORA27-201ENST00000384323 126 ntBASIC1.11□□□□□ -2.23
SHC1P29353 AL603914.1-201ENST00000401964 204 ntBASIC1.11□□□□□ -2.23
SHC1P29353 RPS27P16-201ENST00000425758 201 ntBASIC1.11□□□□□ -2.23
SHC1P29353 RNU6-1211P-201ENST00000459179 105 ntBASIC1.11□□□□□ -2.23
SHC1P29353 Y_RNA.690-201ENST00000516603 95 ntBASIC1.11□□□□□ -2.23
SHC1P29353 RNU6-922P-201ENST00000516753 99 ntBASIC1.11□□□□□ -2.23
SHC1P29353 RNU6-789P-201ENST00000517105 102 ntBASIC1.11□□□□□ -2.23
SHC1P29353 HSPE1P19-201ENST00000603327 295 ntBASIC1.11□□□□□ -2.23
SHC1P29353 U2.22-201ENST00000636441 106 ntBASIC1.11□□□□□ -2.23
SHC1P29353 AC132825.6-201ENST00000638861 357 ntBASIC1.11□□□□□ -2.23
SHC1P29353 SNORD115-34-201ENST00000362441 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-12-201ENST00000362583 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-29-201ENST00000362834 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-9-201ENST00000362912 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-21-201ENST00000362963 81 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-14-201ENST00000363090 81 ntBASIC1.1□□□□□ -2.23
SHC1P29353 RNY1P10-201ENST00000363268 113 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-13-201ENST00000363358 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-41-201ENST00000363608 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-11-201ENST00000363616 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-5-201ENST00000363633 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-39-201ENST00000363694 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-4-201ENST00000363810 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-16-201ENST00000363887 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-6-201ENST00000363942 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 Y_RNA.218-201ENST00000364218 104 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-42-201ENST00000364273 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-15-201ENST00000364809 81 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-1-201ENST00000364961 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-26-201ENST00000365067 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-10-201ENST00000365073 81 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-43-201ENST00000365503 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-36-201ENST00000365629 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD18B-201ENST00000365659 72 ntBASIC1.1□□□□□ -2.23
SHC1P29353 RNU6-959P-201ENST00000384671 107 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORA19-201ENST00000384737 128 ntBASIC1.1□□□□□ -2.23
SHC1P29353 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.1□□□□□ -2.23
SHC1P29353 AL606753.1-201ENST00000427435 87 ntBASIC1.1□□□□□ -2.23
SHC1P29353 RN7SKP179-201ENST00000516126 217 ntBASIC1.1□□□□□ -2.23
SHC1P29353 RNU6-1234P-201ENST00000516877 103 ntBASIC1.1□□□□□ -2.23
SHC1P29353 MIR4764-201ENST00000580680 88 ntBASIC1.1□□□□□ -2.23
SHC1P29353 AL513534.2-201ENST00000603836 250 ntBASIC1.1□□□□□ -2.23
SHC1P29353 AL022345.2-201ENST00000606307 135 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SNORD115-40-201ENST00000606510 82 ntBASIC1.1□□□□□ -2.23
SHC1P29353 MIR4791-201ENST00000607666 84 ntBASIC1.1□□□□□ -2.23
SHC1P29353 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.1□□□□□ -2.23
SHC1P29353 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SHC1P29353 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SHC1P29353 MIR337-201ENST00000362281 93 ntBASIC1.09□□□□□ -2.23
SHC1P29353 RNU6-349P-201ENST00000362402 107 ntBASIC1.09□□□□□ -2.23
SHC1P29353 Y_RNA.280-201ENST00000364765 112 ntBASIC1.09□□□□□ -2.23
SHC1P29353 SNORA1.2-201ENST00000365189 134 ntBASIC1.09□□□□□ -2.23
SHC1P29353 MIR520C-201ENST00000385005 87 ntBASIC1.09□□□□□ -2.23
SHC1P29353 AL451046.2-201ENST00000403074 277 ntBASIC1.09□□□□□ -2.23
SHC1P29353 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.09□□□□□ -2.23
SHC1P29353 snoU13.25-201ENST00000458945 104 ntBASIC1.09□□□□□ -2.23
SHC1P29353 RPS29P24-201ENST00000486345 171 ntBASIC1.09□□□□□ -2.23
SHC1P29353 RNU7-41P-201ENST00000515917 61 ntBASIC1.09□□□□□ -2.23
SHC1P29353 Y_RNA.692-201ENST00000516627 105 ntBASIC1.09□□□□□ -2.23
SHC1P29353 RNU6-958P-201ENST00000516995 106 ntBASIC1.09□□□□□ -2.23
SHC1P29353 AC019176.1-201ENST00000518519 225 ntBASIC1.09□□□□□ -2.23
SHC1P29353 MIR3937-201ENST00000580135 106 ntBASIC1.09□□□□□ -2.23
SHC1P29353 MIR3192-201ENST00000584920 77 ntBASIC1.09□□□□□ -2.23
SHC1P29353 AC108081.1-201ENST00000604358 221 ntBASIC1.09□□□□□ -2.23
SHC1P29353 AC011603.4-201ENST00000611325 277 ntBASIC1.09□□□□□ -2.23
SHC1P29353 TUG1_4.1-201ENST00000619464 181 ntBASIC1.09□□□□□ -2.23
SHC1P29353 AC091932.4-201ENST00000623386 200 ntBASIC1.09□□□□□ -2.23
SHC1P29353 AL596211.1-201ENST00000569873 2277 ntBASIC1.09□□□□□ -2.24
SHC1P29353 MIR26B-201ENST00000362251 77 ntBASIC1.08□□□□□ -2.24
SHC1P29353 Y_RNA.114-201ENST00000363265 113 ntBASIC1.08□□□□□ -2.24
SHC1P29353 RNU6-392P-201ENST00000364926 101 ntBASIC1.08□□□□□ -2.24
SHC1P29353 SNORD113-1-201ENST00000365321 69 ntBASIC1.08□□□□□ -2.24
SHC1P29353 RNU6-53P-201ENST00000365367 106 ntBASIC1.08□□□□□ -2.24
SHC1P29353 SNORA24-201ENST00000384096 131 ntBASIC1.08□□□□□ -2.24
SHC1P29353 RNU6-1065P-201ENST00000384513 106 ntBASIC1.08□□□□□ -2.24
SHC1P29353 SNX2P2-201ENST00000424553 323 ntBASIC1.08□□□□□ -2.24
SHC1P29353 RNU7-67P-201ENST00000459003 62 ntBASIC1.08□□□□□ -2.24
SHC1P29353 RNU2-11P-201ENST00000459191 187 ntBASIC1.08□□□□□ -2.24
SHC1P29353 RPL30P7-201ENST00000479312 323 ntBASIC1.08□□□□□ -2.24
SHC1P29353 RNU6-998P-201ENST00000515894 101 ntBASIC1.08□□□□□ -2.24
SHC1P29353 RNU5E-3P-201ENST00000515913 68 ntBASIC1.08□□□□□ -2.24
SHC1P29353 RNU6-322P-201ENST00000516010 103 ntBASIC1.08□□□□□ -2.24
SHC1P29353 Y_RNA.676-201ENST00000516393 96 ntBASIC1.08□□□□□ -2.24
SHC1P29353 IGKV1-22-201ENST00000524313 326 ntBASIC1.08□□□□□ -2.24
SHC1P29353 U7.2-201ENST00000607576 63 ntBASIC1.08□□□□□ -2.24
SHC1P29353 AL096861.1-201ENST00000610899 123 ntBASIC1.08□□□□□ -2.24
SHC1P29353 AC243994.1-201ENST00000618627 109 ntBASIC1.08□□□□□ -2.24
SHC1P29353 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SHC1P29353 RNU6-235P-201ENST00000362644 107 ntBASIC1.07□□□□□ -2.24
SHC1P29353 Y_RNA.525-201ENST00000384570 113 ntBASIC1.07□□□□□ -2.24
SHC1P29353 Y_RNA.537-201ENST00000384626 109 ntBASIC1.07□□□□□ -2.24
SHC1P29353 RNU6-913P-201ENST00000390913 95 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms