Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC108706.1-201ENST00000611053 297 ntBASIC0.98□□□□□ -2.25
ABCD3P28288 Y_RNA.60-201ENST00000362831 98 ntBASIC0.97□□□□□ -2.25
ABCD3P28288 RNU6-580P-201ENST00000365159 107 ntBASIC0.97□□□□□ -2.25
ABCD3P28288 RNU6-1292P-201ENST00000383856 107 ntBASIC0.97□□□□□ -2.25
ABCD3P28288 SNORD77.3-201ENST00000391113 65 ntBASIC0.97□□□□□ -2.25
ABCD3P28288 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.97□□□□□ -2.25
ABCD3P28288 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.97□□□□□ -2.25
ABCD3P28288 RNY3P16-201ENST00000516338 101 ntBASIC0.97□□□□□ -2.25
ABCD3P28288 RNU6-1110P-201ENST00000516462 101 ntBASIC0.97□□□□□ -2.25
ABCD3P28288 AC025627.3-201ENST00000582078 182 ntBASIC0.97□□□□□ -2.25
ABCD3P28288 AL365205.2-201ENST00000594586 68 ntBASIC0.97□□□□□ -2.25
ABCD3P28288 SNORD114-21-201ENST00000606412 72 ntBASIC0.97□□□□□ -2.25
ABCD3P28288 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
ABCD3P28288 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
ABCD3P28288 Y_RNA.307-201ENST00000365022 117 ntBASIC0.96□□□□□ -2.26
ABCD3P28288 SNORA1-201ENST00000384107 130 ntBASIC0.96□□□□□ -2.26
ABCD3P28288 RNU4-70P-201ENST00000384579 139 ntBASIC0.96□□□□□ -2.26
ABCD3P28288 SNORD38B-201ENST00000384690 67 ntBASIC0.96□□□□□ -2.26
ABCD3P28288 Y_RNA.571-201ENST00000384753 98 ntBASIC0.96□□□□□ -2.26
ABCD3P28288 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.96□□□□□ -2.26
ABCD3P28288 RNA5SP95-201ENST00000410319 137 ntBASIC0.96□□□□□ -2.26
ABCD3P28288 SNORD116-25-201ENST00000516517 92 ntBASIC0.96□□□□□ -2.26
ABCD3P28288 SNORA4-201ENST00000584302 138 ntBASIC0.96□□□□□ -2.26
ABCD3P28288 RNU2-4P-201ENST00000606190 192 ntBASIC0.96□□□□□ -2.26
ABCD3P28288 RNU6-94P-201ENST00000607728 107 ntBASIC0.96□□□□□ -2.26
ABCD3P28288 MIR6734-201ENST00000621166 68 ntBASIC0.96□□□□□ -2.26
ABCD3P28288 SNORD38B-202ENST00000625943 69 ntBASIC0.96□□□□□ -2.26
ABCD3P28288 Z97988.1-201ENST00000637697 135 ntBASIC0.96□□□□□ -2.26
ABCD3P28288 RNU6-125P-201ENST00000384505 107 ntBASIC0.95□□□□□ -2.26
ABCD3P28288 RNU6-913P-201ENST00000390913 95 ntBASIC0.95□□□□□ -2.26
ABCD3P28288 MIR548I3-201ENST00000408378 149 ntBASIC0.95□□□□□ -2.26
ABCD3P28288 Y_RNA.618-201ENST00000410949 107 ntBASIC0.95□□□□□ -2.26
ABCD3P28288 RNU2-11P-201ENST00000459191 187 ntBASIC0.95□□□□□ -2.26
ABCD3P28288 RNU7-80P-201ENST00000459562 61 ntBASIC0.95□□□□□ -2.26
ABCD3P28288 Y_RNA.680-201ENST00000516441 93 ntBASIC0.95□□□□□ -2.26
ABCD3P28288 RNU6-111P-201ENST00000517179 105 ntBASIC0.95□□□□□ -2.26
ABCD3P28288 MIR3129-201ENST00000581095 76 ntBASIC0.95□□□□□ -2.26
ABCD3P28288 MIR5197-201ENST00000583721 112 ntBASIC0.95□□□□□ -2.26
ABCD3P28288 MIR8055-201ENST00000610739 97 ntBASIC0.95□□□□□ -2.26
ABCD3P28288 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
ABCD3P28288 SNORA1.1-201ENST00000364671 133 ntBASIC0.94□□□□□ -2.26
ABCD3P28288 RNU6-923P-201ENST00000364753 107 ntBASIC0.94□□□□□ -2.26
ABCD3P28288 Y_RNA.454-201ENST00000384224 113 ntBASIC0.94□□□□□ -2.26
ABCD3P28288 Y_RNA.489-201ENST00000384410 101 ntBASIC0.94□□□□□ -2.26
ABCD3P28288 RNA5SP261-201ENST00000410536 106 ntBASIC0.94□□□□□ -2.26
ABCD3P28288 RNU2-64P-201ENST00000411315 191 ntBASIC0.94□□□□□ -2.26
ABCD3P28288 MIR4308-201ENST00000580634 81 ntBASIC0.94□□□□□ -2.26
ABCD3P28288 MIR378D2-201ENST00000580636 98 ntBASIC0.94□□□□□ -2.26
ABCD3P28288 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.94□□□□□ -2.26
ABCD3P28288 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
ABCD3P28288 MIR302B-201ENST00000362188 73 ntBASIC0.93□□□□□ -2.26
ABCD3P28288 Y_RNA.182-201ENST00000363880 111 ntBASIC0.93□□□□□ -2.26
ABCD3P28288 SNORD114-22-201ENST00000365423 72 ntBASIC0.93□□□□□ -2.26
ABCD3P28288 MIR1827-201ENST00000408549 66 ntBASIC0.93□□□□□ -2.26
ABCD3P28288 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.93□□□□□ -2.26
ABCD3P28288 Z83818.1-201ENST00000603584 150 ntBASIC0.93□□□□□ -2.26
ABCD3P28288 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
ABCD3P28288 Y_RNA.200-201ENST00000364018 102 ntBASIC0.92□□□□□ -2.26
ABCD3P28288 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
ABCD3P28288 RNU6-275P-201ENST00000364910 107 ntBASIC0.92□□□□□ -2.26
ABCD3P28288 Y_RNA.351-201ENST00000365436 96 ntBASIC0.92□□□□□ -2.26
ABCD3P28288 RNU6-643P-201ENST00000384018 107 ntBASIC0.92□□□□□ -2.26
ABCD3P28288 Y_RNA.435-201ENST00000384095 112 ntBASIC0.92□□□□□ -2.26
ABCD3P28288 RNU6-574P-201ENST00000384265 107 ntBASIC0.92□□□□□ -2.26
ABCD3P28288 MIR608-201ENST00000384820 100 ntBASIC0.92□□□□□ -2.26
ABCD3P28288 MIR489-201ENST00000384923 84 ntBASIC0.92□□□□□ -2.26
ABCD3P28288 SNORD89-201ENST00000390981 114 ntBASIC0.92□□□□□ -2.26
ABCD3P28288 AC211469.2-201ENST00000605461 205 ntBASIC0.92□□□□□ -2.26
ABCD3P28288 MIR1-1-201ENST00000362147 71 ntBASIC0.91□□□□□ -2.26
ABCD3P28288 RNU6-978P-201ENST00000364371 103 ntBASIC0.91□□□□□ -2.26
ABCD3P28288 RNU6-205P-201ENST00000390858 107 ntBASIC0.91□□□□□ -2.26
ABCD3P28288 AC090844.1-201ENST00000422019 156 ntBASIC0.91□□□□□ -2.26
ABCD3P28288 AL138752.1-201ENST00000452964 351 ntBASIC0.91□□□□□ -2.26
ABCD3P28288 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.91□□□□□ -2.26
ABCD3P28288 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
ABCD3P28288 MIR411-201ENST00000362239 96 ntBASIC0.9□□□□□ -2.27
ABCD3P28288 Y_RNA.75-201ENST00000362927 97 ntBASIC0.9□□□□□ -2.27
ABCD3P28288 Y_RNA.83-201ENST00000363005 113 ntBASIC0.9□□□□□ -2.27
ABCD3P28288 SNORD114-27-201ENST00000363766 70 ntBASIC0.9□□□□□ -2.27
ABCD3P28288 Y_RNA.354-201ENST00000365448 111 ntBASIC0.9□□□□□ -2.27
ABCD3P28288 RNU7-62P-201ENST00000458856 62 ntBASIC0.9□□□□□ -2.27
ABCD3P28288 AC113410.1-201ENST00000505029 247 ntBASIC0.9□□□□□ -2.27
ABCD3P28288 ACA64.5-201ENST00000516207 127 ntBASIC0.9□□□□□ -2.27
ABCD3P28288 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.9□□□□□ -2.27
ABCD3P28288 AL353765.1-201ENST00000605514 183 ntBASIC0.9□□□□□ -2.27
ABCD3P28288 MIR342-201ENST00000362212 99 ntBASIC0.89□□□□□ -2.27
ABCD3P28288 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
ABCD3P28288 RNA5SP127-201ENST00000411051 133 ntBASIC0.89□□□□□ -2.27
ABCD3P28288 AC244023.1-201ENST00000426884 112 ntBASIC0.89□□□□□ -2.27
ABCD3P28288 AC009779.6-201ENST00000603972 165 ntBASIC0.89□□□□□ -2.27
ABCD3P28288 AC242498.1-201ENST00000604134 111 ntBASIC0.89□□□□□ -2.27
ABCD3P28288 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.89□□□□□ -2.27
ABCD3P28288 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
ABCD3P28288 Y_RNA.401-201ENST00000383965 117 ntBASIC0.88□□□□□ -2.27
ABCD3P28288 Y_RNA.466-201ENST00000384294 113 ntBASIC0.88□□□□□ -2.27
ABCD3P28288 MIR100-201ENST00000385259 80 ntBASIC0.88□□□□□ -2.27
ABCD3P28288 RNU6-602P-201ENST00000411155 105 ntBASIC0.88□□□□□ -2.27
ABCD3P28288 HMGN1P33-201ENST00000432945 451 ntBASIC0.88□□□□□ -2.27
ABCD3P28288 RNU7-70P-201ENST00000516941 66 ntBASIC0.88□□□□□ -2.27
ABCD3P28288 MRPS18CP4-201ENST00000535821 231 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms