Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 MIR302B-201ENST00000362188 73 ntBASIC0.31□□□□□ -2.36
BDNFP23560 Y_RNA.105-201ENST00000363182 111 ntBASIC0.31□□□□□ -2.36
BDNFP23560 RNU6-450P-201ENST00000364654 107 ntBASIC0.31□□□□□ -2.36
BDNFP23560 RNY3P5-201ENST00000384127 102 ntBASIC0.31□□□□□ -2.36
BDNFP23560 SNORD61-201ENST00000384252 73 ntBASIC0.31□□□□□ -2.36
BDNFP23560 RNU6-602P-201ENST00000411155 105 ntBASIC0.31□□□□□ -2.36
BDNFP23560 RNU6-998P-201ENST00000515894 101 ntBASIC0.31□□□□□ -2.36
BDNFP23560 RNU6-1270P-201ENST00000517128 108 ntBASIC0.31□□□□□ -2.36
BDNFP23560 MIR8087-201ENST00000612745 78 ntBASIC0.31□□□□□ -2.36
BDNFP23560 snoU2_19.2-201ENST00000363024 80 ntBASIC0.3□□□□□ -2.36
BDNFP23560 RNU6-1309P-201ENST00000363305 108 ntBASIC0.3□□□□□ -2.36
BDNFP23560 RNU6-770P-201ENST00000363929 105 ntBASIC0.3□□□□□ -2.36
BDNFP23560 Y_RNA.217-201ENST00000364214 105 ntBASIC0.3□□□□□ -2.36
BDNFP23560 RNU6-1189P-201ENST00000383958 107 ntBASIC0.3□□□□□ -2.36
BDNFP23560 RNU6-938P-201ENST00000411285 103 ntBASIC0.3□□□□□ -2.36
BDNFP23560 RNU2-11P-201ENST00000459191 187 ntBASIC0.3□□□□□ -2.36
BDNFP23560 Y_RNA.641-201ENST00000459414 105 ntBASIC0.3□□□□□ -2.36
BDNFP23560 Y_RNA.394-201ENST00000383942 103 ntBASIC0.29□□□□□ -2.36
BDNFP23560 RNU6-662P-201ENST00000384253 104 ntBASIC0.29□□□□□ -2.36
BDNFP23560 Y_RNA.509-201ENST00000384506 99 ntBASIC0.29□□□□□ -2.36
BDNFP23560 Y_RNA.541-201ENST00000384640 113 ntBASIC0.29□□□□□ -2.36
BDNFP23560 RNU6-469P-201ENST00000516253 101 ntBASIC0.29□□□□□ -2.36
BDNFP23560 RNY3P15-201ENST00000516297 97 ntBASIC0.29□□□□□ -2.36
BDNFP23560 SNORD36C-201ENST00000516733 66 ntBASIC0.29□□□□□ -2.36
BDNFP23560 RNU6-448P-201ENST00000517052 107 ntBASIC0.29□□□□□ -2.36
BDNFP23560 RNA5SP330-201ENST00000517096 96 ntBASIC0.29□□□□□ -2.36
BDNFP23560 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.29□□□□□ -2.36
BDNFP23560 UBE2WP1-201ENST00000362030 340 ntBASIC0.28□□□□□ -2.36
BDNFP23560 RNU6-349P-201ENST00000362402 107 ntBASIC0.28□□□□□ -2.36
BDNFP23560 Y_RNA.214-201ENST00000364201 112 ntBASIC0.28□□□□□ -2.36
BDNFP23560 RNU6-474P-201ENST00000384243 107 ntBASIC0.28□□□□□ -2.36
BDNFP23560 MIR548A2-201ENST00000384956 97 ntBASIC0.28□□□□□ -2.36
BDNFP23560 AC113618.1-201ENST00000416747 285 ntBASIC0.28□□□□□ -2.36
BDNFP23560 ELOCP20-201ENST00000422460 345 ntBASIC0.28□□□□□ -2.36
BDNFP23560 RNA5SP153-201ENST00000516498 76 ntBASIC0.28□□□□□ -2.36
BDNFP23560 RNA5SP94-201ENST00000516917 108 ntBASIC0.28□□□□□ -2.36
BDNFP23560 AL008718.3-201ENST00000610217 321 ntBASIC0.28□□□□□ -2.36
BDNFP23560 snoU18.1-201ENST00000629629 71 ntBASIC0.28□□□□□ -2.36
BDNFP23560 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.28□□□□□ -2.36
BDNFP23560 Y_RNA.7-201ENST00000362352 102 ntBASIC0.27□□□□□ -2.37
BDNFP23560 Y_RNA.85-201ENST00000363014 111 ntBASIC0.27□□□□□ -2.37
BDNFP23560 Y_RNA.115-201ENST00000363272 98 ntBASIC0.27□□□□□ -2.37
BDNFP23560 Y_RNA.128-201ENST00000363391 112 ntBASIC0.27□□□□□ -2.37
BDNFP23560 MIR215-201ENST00000384858 110 ntBASIC0.27□□□□□ -2.37
BDNFP23560 MIR563-201ENST00000385080 79 ntBASIC0.27□□□□□ -2.37
BDNFP23560 MTATP6P23-201ENST00000440153 476 ntBASIC0.27□□□□□ -2.37
BDNFP23560 SNORA62.5-201ENST00000516634 120 ntBASIC0.27□□□□□ -2.37
BDNFP23560 AL160413.1-201ENST00000622780 310 ntBASIC0.27□□□□□ -2.37
BDNFP23560 Y_RNA.19-201ENST00000362462 99 ntBASIC0.26□□□□□ -2.37
BDNFP23560 Y_RNA.158-201ENST00000363651 101 ntBASIC0.26□□□□□ -2.37
BDNFP23560 Y_RNA.258-201ENST00000364613 105 ntBASIC0.26□□□□□ -2.37
BDNFP23560 RNA5SP517-201ENST00000364724 117 ntBASIC0.26□□□□□ -2.37
BDNFP23560 Y_RNA.432-201ENST00000384087 111 ntBASIC0.26□□□□□ -2.37
BDNFP23560 Y_RNA.454-201ENST00000384224 113 ntBASIC0.26□□□□□ -2.37
BDNFP23560 Y_RNA.455-201ENST00000384230 98 ntBASIC0.26□□□□□ -2.37
BDNFP23560 AL358176.2-201ENST00000425769 204 ntBASIC0.26□□□□□ -2.37
BDNFP23560 HMGN1P33-201ENST00000432945 451 ntBASIC0.26□□□□□ -2.37
BDNFP23560 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.26□□□□□ -2.37
BDNFP23560 AC131281.1-201ENST00000522984 164 ntBASIC0.26□□□□□ -2.37
BDNFP23560 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
BDNFP23560 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.26□□□□□ -2.37
BDNFP23560 AC134503.1-201ENST00000633048 54 ntBASIC0.26□□□□□ -2.37
BDNFP23560 MTND4P29-201ENST00000503122 1372 ntBASIC0.25□□□□□ -2.37
BDNFP23560 RNU6-716P-201ENST00000365621 103 ntBASIC0.25□□□□□ -2.37
BDNFP23560 Y_RNA.460-201ENST00000384255 102 ntBASIC0.25□□□□□ -2.37
BDNFP23560 RNA5SP237-201ENST00000410414 113 ntBASIC0.25□□□□□ -2.37
BDNFP23560 RPL21P38-201ENST00000418090 167 ntBASIC0.25□□□□□ -2.37
BDNFP23560 SNRPGP12-201ENST00000449481 213 ntBASIC0.25□□□□□ -2.37
BDNFP23560 RNU7-80P-201ENST00000459562 61 ntBASIC0.25□□□□□ -2.37
BDNFP23560 AC108740.1-201ENST00000498629 225 ntBASIC0.25□□□□□ -2.37
BDNFP23560 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.25□□□□□ -2.37
BDNFP23560 uc_338.6-201ENST00000613544 171 ntBASIC0.25□□□□□ -2.37
BDNFP23560 Y_RNA.24-201ENST00000362508 103 ntBASIC0.24□□□□□ -2.37
BDNFP23560 Y_RNA.66-201ENST00000362862 102 ntBASIC0.24□□□□□ -2.37
BDNFP23560 Y_RNA.210-201ENST00000364161 110 ntBASIC0.24□□□□□ -2.37
BDNFP23560 Y_RNA.229-201ENST00000364347 113 ntBASIC0.24□□□□□ -2.37
BDNFP23560 RNU4-10P-201ENST00000364383 140 ntBASIC0.24□□□□□ -2.37
BDNFP23560 SNORA22B-201ENST00000383876 138 ntBASIC0.24□□□□□ -2.37
BDNFP23560 MIR626-201ENST00000385032 94 ntBASIC0.24□□□□□ -2.37
BDNFP23560 RNA5SP127-201ENST00000411051 133 ntBASIC0.24□□□□□ -2.37
BDNFP23560 SERF1AP1-201ENST00000514575 187 ntBASIC0.24□□□□□ -2.37
BDNFP23560 MIR3152-201ENST00000579801 74 ntBASIC0.24□□□□□ -2.37
BDNFP23560 MIR4514-201ENST00000581410 57 ntBASIC0.24□□□□□ -2.37
BDNFP23560 AL109933.3-201ENST00000619095 188 ntBASIC0.24□□□□□ -2.37
BDNFP23560 SNORD44.1-201ENST00000363202 61 ntBASIC0.23□□□□□ -2.37
BDNFP23560 RNA5SP62-201ENST00000363457 110 ntBASIC0.23□□□□□ -2.37
BDNFP23560 RNU6-806P-201ENST00000365147 105 ntBASIC0.23□□□□□ -2.37
BDNFP23560 RNU6-211P-201ENST00000384047 107 ntBASIC0.23□□□□□ -2.37
BDNFP23560 AF228730.3-201ENST00000436691 102 ntBASIC0.23□□□□□ -2.37
BDNFP23560 AL138752.1-201ENST00000452964 351 ntBASIC0.23□□□□□ -2.37
BDNFP23560 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.23□□□□□ -2.37
BDNFP23560 Y_RNA.711-201ENST00000516993 102 ntBASIC0.23□□□□□ -2.37
BDNFP23560 AP003327.1-201ENST00000529684 127 ntBASIC0.23□□□□□ -2.37
BDNFP23560 AC113195.1-201ENST00000579952 141 ntBASIC0.23□□□□□ -2.37
BDNFP23560 AC023932.2-201ENST00000603176 175 ntBASIC0.23□□□□□ -2.37
BDNFP23560 AC008608.1-201ENST00000603910 127 ntBASIC0.23□□□□□ -2.37
BDNFP23560 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.23□□□□□ -2.37
BDNFP23560 Y_RNA.16-201ENST00000362421 102 ntBASIC0.22□□□□□ -2.37
BDNFP23560 Y_RNA.84-201ENST00000363011 104 ntBASIC0.22□□□□□ -2.37
BDNFP23560 Y_RNA.440-201ENST00000384120 114 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms