Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC131055.1-201ENST00000584626 316 ntBASIC1.22□□□□□ -2.21
TNFSF4P23510 AL645939.4-201ENST00000604495 135 ntBASIC1.22□□□□□ -2.21
TNFSF4P23510 AC106800.4-201ENST00000614905 153 ntBASIC1.22□□□□□ -2.21
TNFSF4P23510 MIR7974-201ENST00000615835 79 ntBASIC1.22□□□□□ -2.21
TNFSF4P23510 Y_RNA.168-201ENST00000363740 102 ntBASIC1.21□□□□□ -2.22
TNFSF4P23510 RNU6-682P-201ENST00000363843 106 ntBASIC1.21□□□□□ -2.22
TNFSF4P23510 RNU4-84P-201ENST00000364200 139 ntBASIC1.21□□□□□ -2.22
TNFSF4P23510 RNU6-654P-201ENST00000364373 107 ntBASIC1.21□□□□□ -2.22
TNFSF4P23510 SNORD114-24-201ENST00000365029 72 ntBASIC1.21□□□□□ -2.22
TNFSF4P23510 RNU6-1318P-201ENST00000365389 103 ntBASIC1.21□□□□□ -2.22
TNFSF4P23510 RNU6-768P-201ENST00000384683 107 ntBASIC1.21□□□□□ -2.22
TNFSF4P23510 SNORD38B-201ENST00000384690 67 ntBASIC1.21□□□□□ -2.22
TNFSF4P23510 RNU6-794P-201ENST00000517261 64 ntBASIC1.21□□□□□ -2.22
TNFSF4P23510 AC036111.3-201ENST00000526389 112 ntBASIC1.21□□□□□ -2.22
TNFSF4P23510 AC023827.1-201ENST00000569247 97 ntBASIC1.21□□□□□ -2.22
TNFSF4P23510 MIR3646-201ENST00000578301 84 ntBASIC1.21□□□□□ -2.22
TNFSF4P23510 AC091932.4-201ENST00000623386 200 ntBASIC1.21□□□□□ -2.22
TNFSF4P23510 SNORD38B-202ENST00000625943 69 ntBASIC1.21□□□□□ -2.22
TNFSF4P23510 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.2□□□□□ -2.22
TNFSF4P23510 MIR4781-201ENST00000585250 76 ntBASIC1.2□□□□□ -2.22
TNFSF4P23510 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.19□□□□□ -2.22
TNFSF4P23510 RNU1-133P-201ENST00000364867 167 ntBASIC1.19□□□□□ -2.22
TNFSF4P23510 Y_RNA.441-201ENST00000384123 112 ntBASIC1.19□□□□□ -2.22
TNFSF4P23510 RNU6-125P-201ENST00000384505 107 ntBASIC1.19□□□□□ -2.22
TNFSF4P23510 SNORA2B-201ENST00000384583 137 ntBASIC1.19□□□□□ -2.22
TNFSF4P23510 MIR320A-201ENST00000385302 82 ntBASIC1.19□□□□□ -2.22
TNFSF4P23510 SNORA75.5-201ENST00000391291 81 ntBASIC1.19□□□□□ -2.22
TNFSF4P23510 RNU4-62P-201ENST00000410125 130 ntBASIC1.19□□□□□ -2.22
TNFSF4P23510 FABP5P4-201ENST00000437203 171 ntBASIC1.19□□□□□ -2.22
TNFSF4P23510 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.19□□□□□ -2.22
TNFSF4P23510 AC090425.1-201ENST00000610007 140 ntBASIC1.19□□□□□ -2.22
TNFSF4P23510 AC012676.2-201ENST00000619258 186 ntBASIC1.19□□□□□ -2.22
TNFSF4P23510 AL391516.1-201ENST00000554380 2449 ntBASIC1.18□□□□□ -2.22
TNFSF4P23510 AL596211.1-201ENST00000569873 2277 ntBASIC1.18□□□□□ -2.22
TNFSF4P23510 SNORA17.3-201ENST00000391159 129 ntBASIC1.18□□□□□ -2.22
TNFSF4P23510 RNU6-1135P-201ENST00000411083 103 ntBASIC1.18□□□□□ -2.22
TNFSF4P23510 AC090844.1-201ENST00000422019 156 ntBASIC1.18□□□□□ -2.22
TNFSF4P23510 RNU6-1149P-201ENST00000516810 97 ntBASIC1.18□□□□□ -2.22
TNFSF4P23510 SCARNA15-202ENST00000516881 127 ntBASIC1.18□□□□□ -2.22
TNFSF4P23510 MIR3671-201ENST00000580455 88 ntBASIC1.18□□□□□ -2.22
TNFSF4P23510 MIR6844-201ENST00000637122 62 ntBASIC1.18□□□□□ -2.22
TNFSF4P23510 SNORA7.1-201ENST00000363750 139 ntBASIC1.17□□□□□ -2.22
TNFSF4P23510 RNU6-818P-201ENST00000364837 108 ntBASIC1.17□□□□□ -2.22
TNFSF4P23510 Y_RNA.354-201ENST00000365448 111 ntBASIC1.17□□□□□ -2.22
TNFSF4P23510 MIR942-201ENST00000401111 86 ntBASIC1.17□□□□□ -2.22
TNFSF4P23510 RNU5E-9P-201ENST00000411164 104 ntBASIC1.17□□□□□ -2.22
TNFSF4P23510 RPS3AP1-201ENST00000413190 320 ntBASIC1.17□□□□□ -2.22
TNFSF4P23510 HMGN1P33-201ENST00000432945 451 ntBASIC1.17□□□□□ -2.22
TNFSF4P23510 SNORD124-201ENST00000459577 104 ntBASIC1.17□□□□□ -2.22
TNFSF4P23510 RNU7-121P-201ENST00000516604 62 ntBASIC1.17□□□□□ -2.22
TNFSF4P23510 MIR4421-201ENST00000578133 69 ntBASIC1.17□□□□□ -2.22
TNFSF4P23510 MIR3152-201ENST00000579801 74 ntBASIC1.17□□□□□ -2.22
TNFSF4P23510 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TNFSF4P23510 RNU6-580P-201ENST00000365159 107 ntBASIC1.16□□□□□ -2.22
TNFSF4P23510 RNA5SP95-201ENST00000410319 137 ntBASIC1.16□□□□□ -2.22
TNFSF4P23510 RNU6-994P-201ENST00000410507 111 ntBASIC1.16□□□□□ -2.22
TNFSF4P23510 BTF3P4-201ENST00000418852 495 ntBASIC1.16□□□□□ -2.22
TNFSF4P23510 AC067940.1-201ENST00000458411 300 ntBASIC1.16□□□□□ -2.22
TNFSF4P23510 RNU7-95P-201ENST00000459222 64 ntBASIC1.16□□□□□ -2.22
TNFSF4P23510 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.16□□□□□ -2.22
TNFSF4P23510 DNAJC19P2-201ENST00000593340 302 ntBASIC1.16□□□□□ -2.22
TNFSF4P23510 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
TNFSF4P23510 SNORA20-201ENST00000384662 132 ntBASIC1.15□□□□□ -2.23
TNFSF4P23510 RNU6-602P-201ENST00000411155 105 ntBASIC1.15□□□□□ -2.23
TNFSF4P23510 MIR4661-201ENST00000582720 75 ntBASIC1.15□□□□□ -2.23
TNFSF4P23510 HSPE1P19-201ENST00000603327 295 ntBASIC1.15□□□□□ -2.23
TNFSF4P23510 AL157834.3-201ENST00000615543 103 ntBASIC1.15□□□□□ -2.23
TNFSF4P23510 MIR6717-201ENST00000622747 73 ntBASIC1.15□□□□□ -2.23
TNFSF4P23510 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
TNFSF4P23510 Y_RNA.52-201ENST00000362760 96 ntBASIC1.14□□□□□ -2.23
TNFSF4P23510 RNU6-1082P-201ENST00000364574 107 ntBASIC1.14□□□□□ -2.23
TNFSF4P23510 RNU6-1319P-201ENST00000390855 104 ntBASIC1.14□□□□□ -2.23
TNFSF4P23510 RNU6-205P-201ENST00000390858 107 ntBASIC1.14□□□□□ -2.23
TNFSF4P23510 RNU6-747P-201ENST00000390928 104 ntBASIC1.14□□□□□ -2.23
TNFSF4P23510 RNU6-241P-201ENST00000391148 104 ntBASIC1.14□□□□□ -2.23
TNFSF4P23510 SNORA26.6-201ENST00000391256 115 ntBASIC1.14□□□□□ -2.23
TNFSF4P23510 RNU6-1190P-201ENST00000410811 104 ntBASIC1.14□□□□□ -2.23
TNFSF4P23510 RNU6-177P-201ENST00000411257 104 ntBASIC1.14□□□□□ -2.23
TNFSF4P23510 AP1B1P2-201ENST00000416196 106 ntBASIC1.14□□□□□ -2.23
TNFSF4P23510 AC244023.1-201ENST00000426884 112 ntBASIC1.14□□□□□ -2.23
TNFSF4P23510 UBL5P1-201ENST00000507979 193 ntBASIC1.14□□□□□ -2.23
TNFSF4P23510 AC108729.3-201ENST00000513484 108 ntBASIC1.14□□□□□ -2.23
TNFSF4P23510 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.14□□□□□ -2.23
TNFSF4P23510 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.14□□□□□ -2.23
TNFSF4P23510 AC242498.1-201ENST00000604134 111 ntBASIC1.14□□□□□ -2.23
TNFSF4P23510 RNU6-94P-201ENST00000607728 107 ntBASIC1.14□□□□□ -2.23
TNFSF4P23510 MTND5P32-201ENST00000560711 1802 ntBASIC1.14□□□□□ -2.23
TNFSF4P23510 RNA5SP432-201ENST00000362480 116 ntBASIC1.13□□□□□ -2.23
TNFSF4P23510 Y_RNA.272-201ENST00000364696 102 ntBASIC1.13□□□□□ -2.23
TNFSF4P23510 RNU6-1336P-201ENST00000383886 109 ntBASIC1.13□□□□□ -2.23
TNFSF4P23510 Y_RNA.430-201ENST00000384081 110 ntBASIC1.13□□□□□ -2.23
TNFSF4P23510 MIR758-201ENST00000390227 88 ntBASIC1.13□□□□□ -2.23
TNFSF4P23510 SNORD37.2-201ENST00000391075 66 ntBASIC1.13□□□□□ -2.23
TNFSF4P23510 RNU7-62P-201ENST00000458856 62 ntBASIC1.13□□□□□ -2.23
TNFSF4P23510 RNU1-123P-201ENST00000458950 160 ntBASIC1.13□□□□□ -2.23
TNFSF4P23510 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
TNFSF4P23510 PDCD5P2-201ENST00000507570 312 ntBASIC1.13□□□□□ -2.23
TNFSF4P23510 AC108059.2-201ENST00000434626 151 ntBASIC1.12□□□□□ -2.23
TNFSF4P23510 RPS29P28-201ENST00000446439 141 ntBASIC1.12□□□□□ -2.23
TNFSF4P23510 snoU13.31-201ENST00000607291 104 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms