Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 MIR548X2-201ENST00000579776 100 ntBASIC1.32□□□□□ -2.2
CD53P19397 AL365205.2-201ENST00000594586 68 ntBASIC1.32□□□□□ -2.2
CD53P19397 HSPE1P19-201ENST00000603327 295 ntBASIC1.32□□□□□ -2.2
CD53P19397 MIR342-201ENST00000362212 99 ntBASIC1.31□□□□□ -2.2
CD53P19397 Y_RNA.343-201ENST00000365354 112 ntBASIC1.31□□□□□ -2.2
CD53P19397 RNU6-1189P-201ENST00000383958 107 ntBASIC1.31□□□□□ -2.2
CD53P19397 RNU6-746P-201ENST00000384112 109 ntBASIC1.31□□□□□ -2.2
CD53P19397 RNU6-187P-201ENST00000384139 106 ntBASIC1.31□□□□□ -2.2
CD53P19397 SNORD79.1-201ENST00000516069 84 ntBASIC1.31□□□□□ -2.2
CD53P19397 SNORA31.24-201ENST00000517232 57 ntBASIC1.31□□□□□ -2.2
CD53P19397 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.31□□□□□ -2.2
CD53P19397 AL157834.3-201ENST00000615543 103 ntBASIC1.31□□□□□ -2.2
CD53P19397 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.31□□□□□ -2.2
CD53P19397 RNY1P11-201ENST00000363759 113 ntBASIC1.3□□□□□ -2.2
CD53P19397 Y_RNA.370-201ENST00000365589 108 ntBASIC1.3□□□□□ -2.2
CD53P19397 Y_RNA.410-201ENST00000383992 113 ntBASIC1.3□□□□□ -2.2
CD53P19397 MIR570-201ENST00000384917 97 ntBASIC1.3□□□□□ -2.2
CD53P19397 SNORD28B-201ENST00000390993 75 ntBASIC1.3□□□□□ -2.2
CD53P19397 MIR1323-201ENST00000408090 73 ntBASIC1.3□□□□□ -2.2
CD53P19397 AC087499.4-201ENST00000448505 178 ntBASIC1.3□□□□□ -2.2
CD53P19397 RNU1-123P-201ENST00000458950 160 ntBASIC1.3□□□□□ -2.2
CD53P19397 RNU6-830P-201ENST00000516353 107 ntBASIC1.3□□□□□ -2.2
CD53P19397 RNU6-426P-201ENST00000516464 97 ntBASIC1.3□□□□□ -2.2
CD53P19397 AL391516.1-201ENST00000554380 2449 ntBASIC1.29□□□□□ -2.2
CD53P19397 Y_RNA.191-201ENST00000363972 113 ntBASIC1.29□□□□□ -2.2
CD53P19397 SNORA1.2-201ENST00000365189 134 ntBASIC1.29□□□□□ -2.2
CD53P19397 RNU6-1292P-201ENST00000383856 107 ntBASIC1.29□□□□□ -2.2
CD53P19397 RNY1P5-201ENST00000383890 115 ntBASIC1.29□□□□□ -2.2
CD53P19397 MIR624-201ENST00000385217 97 ntBASIC1.29□□□□□ -2.2
CD53P19397 Y_RNA.584-201ENST00000391090 114 ntBASIC1.29□□□□□ -2.2
CD53P19397 RNU6-460P-201ENST00000391158 108 ntBASIC1.29□□□□□ -2.2
CD53P19397 RNU6-938P-201ENST00000411285 103 ntBASIC1.29□□□□□ -2.2
CD53P19397 AC107297.1-201ENST00000459991 176 ntBASIC1.29□□□□□ -2.2
CD53P19397 UBL5P1-201ENST00000507979 193 ntBASIC1.29□□□□□ -2.2
CD53P19397 RNA5SP102-201ENST00000516865 106 ntBASIC1.29□□□□□ -2.2
CD53P19397 SNORA74.3-201ENST00000517108 154 ntBASIC1.29□□□□□ -2.2
CD53P19397 AC090821.2-201ENST00000523552 176 ntBASIC1.29□□□□□ -2.2
CD53P19397 MIR548AR-201ENST00000582191 57 ntBASIC1.29□□□□□ -2.2
CD53P19397 MIR4452-201ENST00000583004 71 ntBASIC1.29□□□□□ -2.2
CD53P19397 AC131055.1-201ENST00000584626 316 ntBASIC1.29□□□□□ -2.2
CD53P19397 MIR376A2-201ENST00000636782 80 ntBASIC1.29□□□□□ -2.2
CD53P19397 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.29□□□□□ -2.2
CD53P19397 Y_RNA.52-201ENST00000362760 96 ntBASIC1.28□□□□□ -2.2
CD53P19397 SNORD18B-201ENST00000365659 72 ntBASIC1.28□□□□□ -2.2
CD53P19397 Y_RNA.497-201ENST00000384447 98 ntBASIC1.28□□□□□ -2.2
CD53P19397 MIR520C-201ENST00000385005 87 ntBASIC1.28□□□□□ -2.2
CD53P19397 MIR569-201ENST00000385228 96 ntBASIC1.28□□□□□ -2.2
CD53P19397 MIR758-201ENST00000390227 88 ntBASIC1.28□□□□□ -2.2
CD53P19397 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.28□□□□□ -2.2
CD53P19397 AL591704.2-201ENST00000421658 181 ntBASIC1.28□□□□□ -2.2
CD53P19397 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.28□□□□□ -2.2
CD53P19397 RNU5E-3P-201ENST00000515913 68 ntBASIC1.28□□□□□ -2.2
CD53P19397 RNU7-70P-201ENST00000516941 66 ntBASIC1.28□□□□□ -2.2
CD53P19397 MIR4661-201ENST00000582720 75 ntBASIC1.28□□□□□ -2.2
CD53P19397 MIR5197-201ENST00000583721 112 ntBASIC1.28□□□□□ -2.2
CD53P19397 AL353770.2-201ENST00000620024 78 ntBASIC1.28□□□□□ -2.2
CD53P19397 MTND5P32-201ENST00000560711 1802 ntBASIC1.28□□□□□ -2.2
CD53P19397 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
CD53P19397 U8.1-201ENST00000362843 134 ntBASIC1.27□□□□□ -2.21
CD53P19397 Y_RNA.351-201ENST00000365436 96 ntBASIC1.27□□□□□ -2.21
CD53P19397 Y_RNA.420-201ENST00000384043 110 ntBASIC1.27□□□□□ -2.21
CD53P19397 SNORA27-201ENST00000384323 126 ntBASIC1.27□□□□□ -2.21
CD53P19397 RNU7-67P-201ENST00000459003 62 ntBASIC1.27□□□□□ -2.21
CD53P19397 RNA5SP61-201ENST00000516453 100 ntBASIC1.27□□□□□ -2.21
CD53P19397 RNU6-1149P-201ENST00000516810 97 ntBASIC1.27□□□□□ -2.21
CD53P19397 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.27□□□□□ -2.21
CD53P19397 AC091895.1-201ENST00000624494 256 ntBASIC1.27□□□□□ -2.21
CD53P19397 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.27□□□□□ -2.21
CD53P19397 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CD53P19397 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CD53P19397 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.27□□□□□ -2.21
CD53P19397 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-34-201ENST00000362441 82 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-12-201ENST00000362583 82 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-29-201ENST00000362834 82 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-9-201ENST00000362912 82 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-21-201ENST00000362963 81 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-14-201ENST00000363090 81 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-13-201ENST00000363358 82 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-41-201ENST00000363608 82 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-11-201ENST00000363616 82 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-5-201ENST00000363633 82 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-39-201ENST00000363694 82 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-4-201ENST00000363810 82 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-16-201ENST00000363887 82 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-6-201ENST00000363942 82 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-42-201ENST00000364273 82 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-15-201ENST00000364809 81 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-1-201ENST00000364961 82 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD114-24-201ENST00000365029 72 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-26-201ENST00000365067 82 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-10-201ENST00000365073 81 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-43-201ENST00000365503 82 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORD115-36-201ENST00000365629 82 ntBASIC1.26□□□□□ -2.21
CD53P19397 Y_RNA.494-201ENST00000384432 111 ntBASIC1.26□□□□□ -2.21
CD53P19397 RNU6-1067P-201ENST00000384752 107 ntBASIC1.26□□□□□ -2.21
CD53P19397 MIR200A-201ENST00000384875 90 ntBASIC1.26□□□□□ -2.21
CD53P19397 SNORA40.5-201ENST00000391061 128 ntBASIC1.26□□□□□ -2.21
CD53P19397 AL354695.1-201ENST00000427935 228 ntBASIC1.26□□□□□ -2.21
CD53P19397 AC002429.1-201ENST00000437672 148 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms