Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.26□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.216-201ENST00000364205 93 ntBASIC0.25□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.275-201ENST00000364726 110 ntBASIC0.25□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.634-201ENST00000364811 113 ntBASIC0.25□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-1189P-201ENST00000383958 107 ntBASIC0.25□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.410-201ENST00000383992 113 ntBASIC0.25□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.432-201ENST00000384087 111 ntBASIC0.25□□□□□ -2.37
IGHV3-43DP0DP04 SNORA50A-201ENST00000384225 134 ntBASIC0.25□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.535-201ENST00000384612 99 ntBASIC0.25□□□□□ -2.37
IGHV3-43DP0DP04 SNORD12C-201ENST00000386307 89 ntBASIC0.25□□□□□ -2.37
IGHV3-43DP0DP04 RNU2-55P-201ENST00000411146 174 ntBASIC0.25□□□□□ -2.37
IGHV3-43DP0DP04 SNORA25.12-201ENST00000516202 82 ntBASIC0.25□□□□□ -2.37
IGHV3-43DP0DP04 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.25□□□□□ -2.37
IGHV3-43DP0DP04 MIR3171-201ENST00000584270 74 ntBASIC0.25□□□□□ -2.37
IGHV3-43DP0DP04 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.25□□□□□ -2.37
IGHV3-43DP0DP04 MIR302B-201ENST00000362188 73 ntBASIC0.24□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.117-201ENST00000363294 101 ntBASIC0.24□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.153-201ENST00000363615 91 ntBASIC0.24□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-484P-201ENST00000384016 107 ntBASIC0.24□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.440-201ENST00000384120 114 ntBASIC0.24□□□□□ -2.37
IGHV3-43DP0DP04 MIR563-201ENST00000385080 79 ntBASIC0.24□□□□□ -2.37
IGHV3-43DP0DP04 MT-TF-201ENST00000387314 71 ntBASIC0.24□□□□□ -2.37
IGHV3-43DP0DP04 MIR936-201ENST00000401264 98 ntBASIC0.24□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.622-201ENST00000411091 108 ntBASIC0.24□□□□□ -2.37
IGHV3-43DP0DP04 SNORD71-201ENST00000411292 86 ntBASIC0.24□□□□□ -2.37
IGHV3-43DP0DP04 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.24□□□□□ -2.37
IGHV3-43DP0DP04 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.24□□□□□ -2.37
IGHV3-43DP0DP04 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
IGHV3-43DP0DP04 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
IGHV3-43DP0DP04 SNORD92-201ENST00000585078 85 ntBASIC0.24□□□□□ -2.37
IGHV3-43DP0DP04 AC090625.1-201ENST00000357130 210 ntBASIC0.23□□□□□ -2.37
IGHV3-43DP0DP04 MIR30D-201ENST00000362283 70 ntBASIC0.23□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.61-201ENST00000362835 102 ntBASIC0.23□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.226-201ENST00000364337 114 ntBASIC0.23□□□□□ -2.37
IGHV3-43DP0DP04 RNA5SP517-201ENST00000364724 117 ntBASIC0.23□□□□□ -2.37
IGHV3-43DP0DP04 RNU5E-4P-201ENST00000364931 120 ntBASIC0.23□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.304-201ENST00000365011 112 ntBASIC0.23□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.354-201ENST00000365448 111 ntBASIC0.23□□□□□ -2.37
IGHV3-43DP0DP04 MT-TT-201ENST00000387460 66 ntBASIC0.23□□□□□ -2.37
IGHV3-43DP0DP04 MIR1287-201ENST00000408492 90 ntBASIC0.23□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-1203P-201ENST00000410703 110 ntBASIC0.23□□□□□ -2.37
IGHV3-43DP0DP04 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.23□□□□□ -2.37
IGHV3-43DP0DP04 RNA5SP153-201ENST00000516498 76 ntBASIC0.23□□□□□ -2.37
IGHV3-43DP0DP04 RNA5SP94-201ENST00000516917 108 ntBASIC0.23□□□□□ -2.37
IGHV3-43DP0DP04 RNU6-570P-201ENST00000517051 105 ntBASIC0.23□□□□□ -2.37
IGHV3-43DP0DP04 MIR4711-201ENST00000578274 70 ntBASIC0.23□□□□□ -2.37
IGHV3-43DP0DP04 Y_RNA.44-201ENST00000362676 108 ntBASIC0.22□□□□□ -2.37
IGHV3-43DP0DP04 RNA5SP117-201ENST00000365294 118 ntBASIC0.22□□□□□ -2.37
IGHV3-43DP0DP04 RNY3P5-201ENST00000384127 102 ntBASIC0.22□□□□□ -2.37
IGHV3-43DP0DP04 MIR216A-201ENST00000385063 110 ntBASIC0.22□□□□□ -2.37
IGHV3-43DP0DP04 RNA5SP193-201ENST00000410353 107 ntBASIC0.22□□□□□ -2.37
IGHV3-43DP0DP04 SNORA40.8-201ENST00000411034 126 ntBASIC0.22□□□□□ -2.37
IGHV3-43DP0DP04 AC020661.2-201ENST00000560114 134 ntBASIC0.22□□□□□ -2.37
IGHV3-43DP0DP04 uc_338.16-201ENST00000621804 95 ntBASIC0.22□□□□□ -2.37
IGHV3-43DP0DP04 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.199-201ENST00000364014 102 ntBASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.202-201ENST00000364083 110 ntBASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.238-201ENST00000364441 102 ntBASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 RNU6-867P-201ENST00000364956 107 ntBASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.351-201ENST00000365436 96 ntBASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 VTRNA1-3-201ENST00000365645 89 ntBASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 MIR518A1-201ENST00000385068 85 ntBASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 AL606845.1-201ENST00000404881 255 ntBASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 RNA5SP261-201ENST00000410536 106 ntBASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 RPL39P25-201ENST00000449384 154 ntBASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 SNRPGP8-201ENST00000454064 226 ntBASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 RNU7-45P-201ENST00000459460 63 ntBASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 RNU6-448P-201ENST00000517052 107 ntBASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 AC022523.2-201ENST00000561045 150 ntBASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 AC097639.2-201ENST00000603159 172 ntBASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 MIR6717-201ENST00000622747 73 ntBASIC0.21□□□□□ -2.38
IGHV3-43DP0DP04 MIR103A1-201ENST00000362165 78 ntBASIC0.2□□□□□ -2.38
IGHV3-43DP0DP04 RNU6-740P-201ENST00000364734 105 ntBASIC0.2□□□□□ -2.38
IGHV3-43DP0DP04 RNU6-1327P-201ENST00000365302 105 ntBASIC0.2□□□□□ -2.38
IGHV3-43DP0DP04 SNORA1-201ENST00000384107 130 ntBASIC0.2□□□□□ -2.38
IGHV3-43DP0DP04 MIR616-201ENST00000385293 97 ntBASIC0.2□□□□□ -2.38
IGHV3-43DP0DP04 RNU6-1228P-201ENST00000391014 107 ntBASIC0.2□□□□□ -2.38
IGHV3-43DP0DP04 SNORA26.6-201ENST00000391256 115 ntBASIC0.2□□□□□ -2.38
IGHV3-43DP0DP04 SNORD93-201ENST00000408813 74 ntBASIC0.2□□□□□ -2.38
IGHV3-43DP0DP04 RNU6-1137P-201ENST00000517073 99 ntBASIC0.2□□□□□ -2.38
IGHV3-43DP0DP04 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.2□□□□□ -2.38
IGHV3-43DP0DP04 SNORA25.18-201ENST00000607153 114 ntBASIC0.2□□□□□ -2.38
IGHV3-43DP0DP04 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.2□□□□□ -2.38
IGHV3-43DP0DP04 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.23-201ENST00000362496 106 ntBASIC0.19□□□□□ -2.38
IGHV3-43DP0DP04 snoU2_19.4-201ENST00000364329 80 ntBASIC0.19□□□□□ -2.38
IGHV3-43DP0DP04 RNA5SP237-201ENST00000410414 113 ntBASIC0.19□□□□□ -2.38
IGHV3-43DP0DP04 RNU4-83P-201ENST00000410863 133 ntBASIC0.19□□□□□ -2.38
IGHV3-43DP0DP04 TRBVB-201ENST00000477100 408 ntBASIC0.19□□□□□ -2.38
IGHV3-43DP0DP04 RNU6-453P-201ENST00000516819 85 ntBASIC0.19□□□□□ -2.38
IGHV3-43DP0DP04 MIR3678-201ENST00000578455 94 ntBASIC0.19□□□□□ -2.38
IGHV3-43DP0DP04 SNORA4-201ENST00000584302 138 ntBASIC0.19□□□□□ -2.38
IGHV3-43DP0DP04 AC022709.1-201ENST00000615967 87 ntBASIC0.19□□□□□ -2.38
IGHV3-43DP0DP04 AP001282.2-201ENST00000616149 309 ntBASIC0.19□□□□□ -2.38
IGHV3-43DP0DP04 RNU6-653P-201ENST00000363074 106 ntBASIC0.18□□□□□ -2.38
IGHV3-43DP0DP04 SNORD44.1-201ENST00000363202 61 ntBASIC0.18□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.237-201ENST00000364439 102 ntBASIC0.18□□□□□ -2.38
IGHV3-43DP0DP04 RNU6-42P-201ENST00000384165 107 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms