Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 RNU6-229P-201ENST00000516614 102 ntBASIC0.61□□□□□ -2.31
GGPS1O95749 AC018659.1-201ENST00000551083 169 ntBASIC0.61□□□□□ -2.31
GGPS1O95749 AC097639.2-201ENST00000603159 172 ntBASIC0.61□□□□□ -2.31
GGPS1O95749 AC243829.3-201ENST00000622177 108 ntBASIC0.61□□□□□ -2.31
GGPS1O95749 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
GGPS1O95749 Y_RNA.91-201ENST00000363042 107 ntBASIC0.6□□□□□ -2.31
GGPS1O95749 RNU6-945P-201ENST00000383947 107 ntBASIC0.6□□□□□ -2.31
GGPS1O95749 Y_RNA.410-201ENST00000383992 113 ntBASIC0.6□□□□□ -2.31
GGPS1O95749 Y_RNA.432-201ENST00000384087 111 ntBASIC0.6□□□□□ -2.31
GGPS1O95749 RNU2-70P-201ENST00000410718 179 ntBASIC0.6□□□□□ -2.31
GGPS1O95749 AF228730.3-201ENST00000436691 102 ntBASIC0.6□□□□□ -2.31
GGPS1O95749 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.6□□□□□ -2.31
GGPS1O95749 MIR4804-201ENST00000581683 73 ntBASIC0.6□□□□□ -2.31
GGPS1O95749 MIR6740-201ENST00000618268 113 ntBASIC0.6□□□□□ -2.31
GGPS1O95749 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
GGPS1O95749 MIR335-201ENST00000362173 94 ntBASIC0.59□□□□□ -2.31
GGPS1O95749 Y_RNA.11-201ENST00000362375 109 ntBASIC0.59□□□□□ -2.31
GGPS1O95749 SNORA1.1-201ENST00000364671 133 ntBASIC0.59□□□□□ -2.31
GGPS1O95749 AC015818.7-201ENST00000428754 109 ntBASIC0.59□□□□□ -2.31
GGPS1O95749 HMGN1P33-201ENST00000432945 451 ntBASIC0.59□□□□□ -2.31
GGPS1O95749 AC087499.7-201ENST00000441958 109 ntBASIC0.59□□□□□ -2.31
GGPS1O95749 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.59□□□□□ -2.31
GGPS1O95749 RNU6-998P-201ENST00000515894 101 ntBASIC0.59□□□□□ -2.31
GGPS1O95749 MIR4676-201ENST00000583078 72 ntBASIC0.59□□□□□ -2.31
GGPS1O95749 uc_338.6-201ENST00000613544 171 ntBASIC0.59□□□□□ -2.31
GGPS1O95749 Y_RNA.205-201ENST00000364128 113 ntBASIC0.58□□□□□ -2.32
GGPS1O95749 RNU6-1189P-201ENST00000383958 107 ntBASIC0.58□□□□□ -2.32
GGPS1O95749 SNORA36.2-201ENST00000384004 127 ntBASIC0.58□□□□□ -2.32
GGPS1O95749 MIR616-201ENST00000385293 97 ntBASIC0.58□□□□□ -2.32
GGPS1O95749 MT-TT-201ENST00000387460 66 ntBASIC0.58□□□□□ -2.32
GGPS1O95749 MIR548I3-201ENST00000408378 149 ntBASIC0.58□□□□□ -2.32
GGPS1O95749 RNU6-602P-201ENST00000411155 105 ntBASIC0.58□□□□□ -2.32
GGPS1O95749 MIR18B-201ENST00000454574 71 ntBASIC0.58□□□□□ -2.32
GGPS1O95749 RNU6-1153P-201ENST00000516760 105 ntBASIC0.58□□□□□ -2.32
GGPS1O95749 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.58□□□□□ -2.32
GGPS1O95749 AC020891.4-201ENST00000605745 93 ntBASIC0.58□□□□□ -2.32
GGPS1O95749 SNORD114-23-201ENST00000363536 72 ntBASIC0.57□□□□□ -2.32
GGPS1O95749 snoU2_19.4-201ENST00000364329 80 ntBASIC0.57□□□□□ -2.32
GGPS1O95749 Y_RNA.422-201ENST00000384054 114 ntBASIC0.57□□□□□ -2.32
GGPS1O95749 Y_RNA.440-201ENST00000384120 114 ntBASIC0.57□□□□□ -2.32
GGPS1O95749 SNORD77.3-201ENST00000391113 65 ntBASIC0.57□□□□□ -2.32
GGPS1O95749 RNU6-651P-201ENST00000411040 105 ntBASIC0.57□□□□□ -2.32
GGPS1O95749 Y_RNA.622-201ENST00000411091 108 ntBASIC0.57□□□□□ -2.32
GGPS1O95749 SNRPGP8-201ENST00000454064 226 ntBASIC0.57□□□□□ -2.32
GGPS1O95749 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.57□□□□□ -2.32
GGPS1O95749 AC010332.2-201ENST00000613083 1904 ntBASIC0.56□□□□□ -2.32
GGPS1O95749 RNU4-45P-201ENST00000365469 141 ntBASIC0.56□□□□□ -2.32
GGPS1O95749 RNY1P8-201ENST00000383970 114 ntBASIC0.56□□□□□ -2.32
GGPS1O95749 RNU6-1237P-201ENST00000384777 107 ntBASIC0.56□□□□□ -2.32
GGPS1O95749 MIR588-201ENST00000384900 83 ntBASIC0.56□□□□□ -2.32
GGPS1O95749 MIR140-201ENST00000385282 100 ntBASIC0.56□□□□□ -2.32
GGPS1O95749 RNU6-1228P-201ENST00000391014 107 ntBASIC0.56□□□□□ -2.32
GGPS1O95749 AL606845.1-201ENST00000404881 255 ntBASIC0.56□□□□□ -2.32
GGPS1O95749 Y_RNA.590-201ENST00000410140 107 ntBASIC0.56□□□□□ -2.32
GGPS1O95749 AL138752.1-201ENST00000452964 351 ntBASIC0.56□□□□□ -2.32
GGPS1O95749 RNU2-11P-201ENST00000459191 187 ntBASIC0.56□□□□□ -2.32
GGPS1O95749 snoU13.2-201ENST00000459201 104 ntBASIC0.56□□□□□ -2.32
GGPS1O95749 RNU6-635P-201ENST00000516651 102 ntBASIC0.56□□□□□ -2.32
GGPS1O95749 MIR4282-201ENST00000583613 67 ntBASIC0.56□□□□□ -2.32
GGPS1O95749 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.56□□□□□ -2.32
GGPS1O95749 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
GGPS1O95749 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
GGPS1O95749 Y_RNA.304-201ENST00000365011 112 ntBASIC0.55□□□□□ -2.32
GGPS1O95749 Y_RNA.512-201ENST00000384518 102 ntBASIC0.55□□□□□ -2.32
GGPS1O95749 RNU6-1165P-201ENST00000410119 107 ntBASIC0.55□□□□□ -2.32
GGPS1O95749 RNU7-56P-201ENST00000458744 62 ntBASIC0.55□□□□□ -2.32
GGPS1O95749 Z83818.1-201ENST00000603584 150 ntBASIC0.55□□□□□ -2.32
GGPS1O95749 MIR8062-201ENST00000621515 85 ntBASIC0.55□□□□□ -2.32
GGPS1O95749 U6.104-201ENST00000637979 90 ntBASIC0.55□□□□□ -2.32
GGPS1O95749 AL589743.1-201ENST00000551932 2712 ntBASIC0.54□□□□□ -2.32
GGPS1O95749 Y_RNA.518-201ENST00000384552 113 ntBASIC0.54□□□□□ -2.32
GGPS1O95749 MIR938-201ENST00000401216 83 ntBASIC0.54□□□□□ -2.32
GGPS1O95749 RNU6-1190P-201ENST00000410811 104 ntBASIC0.54□□□□□ -2.32
GGPS1O95749 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
GGPS1O95749 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.54□□□□□ -2.32
GGPS1O95749 RN7SKP12-201ENST00000516275 143 ntBASIC0.54□□□□□ -2.32
GGPS1O95749 RNU6-453P-201ENST00000516819 85 ntBASIC0.54□□□□□ -2.32
GGPS1O95749 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.54□□□□□ -2.32
GGPS1O95749 MIR5087-201ENST00000635826 76 ntBASIC0.54□□□□□ -2.32
GGPS1O95749 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
GGPS1O95749 MIR18A-201ENST00000362310 71 ntBASIC0.53□□□□□ -2.32
GGPS1O95749 Y_RNA.7-201ENST00000362352 102 ntBASIC0.53□□□□□ -2.32
GGPS1O95749 RNU6-1309P-201ENST00000363305 108 ntBASIC0.53□□□□□ -2.32
GGPS1O95749 Y_RNA.199-201ENST00000364014 102 ntBASIC0.53□□□□□ -2.32
GGPS1O95749 MIR193B-201ENST00000384907 83 ntBASIC0.53□□□□□ -2.32
GGPS1O95749 MIR563-201ENST00000385080 79 ntBASIC0.53□□□□□ -2.32
GGPS1O95749 RNU6-381P-201ENST00000391259 108 ntBASIC0.53□□□□□ -2.32
GGPS1O95749 MIR1302-6-201ENST00000408466 90 ntBASIC0.53□□□□□ -2.32
GGPS1O95749 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
GGPS1O95749 Y_RNA.679-201ENST00000516416 91 ntBASIC0.53□□□□□ -2.32
GGPS1O95749 Y_RNA.720-201ENST00000517166 92 ntBASIC0.53□□□□□ -2.32
GGPS1O95749 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.53□□□□□ -2.32
GGPS1O95749 MIR3612-201ENST00000579753 87 ntBASIC0.53□□□□□ -2.32
GGPS1O95749 AL365265.1-201ENST00000621045 234 ntBASIC0.53□□□□□ -2.32
GGPS1O95749 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
GGPS1O95749 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
GGPS1O95749 SNORA1-201ENST00000384107 130 ntBASIC0.52□□□□□ -2.33
GGPS1O95749 Y_RNA.461-201ENST00000384263 103 ntBASIC0.52□□□□□ -2.33
GGPS1O95749 Y_RNA.483-201ENST00000384380 101 ntBASIC0.52□□□□□ -2.33
GGPS1O95749 MT-TW-201ENST00000387382 68 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms