Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 MIR616-201ENST00000385293 97 ntBASIC0.47□□□□□ -2.33
CTDNEP1O95476 RNU6-381P-201ENST00000391259 108 ntBASIC0.47□□□□□ -2.33
CTDNEP1O95476 MIR1302-6-201ENST00000408466 90 ntBASIC0.47□□□□□ -2.33
CTDNEP1O95476 RNU7-73P-201ENST00000458743 63 ntBASIC0.47□□□□□ -2.33
CTDNEP1O95476 RNU6-1299P-201ENST00000516316 100 ntBASIC0.47□□□□□ -2.33
CTDNEP1O95476 RNU6-504P-201ENST00000516568 104 ntBASIC0.47□□□□□ -2.33
CTDNEP1O95476 AL117187.1-201ENST00000555482 181 ntBASIC0.47□□□□□ -2.33
CTDNEP1O95476 MIR4264-201ENST00000583520 66 ntBASIC0.47□□□□□ -2.33
CTDNEP1O95476 AC006504.6-201ENST00000590142 199 ntBASIC0.47□□□□□ -2.33
CTDNEP1O95476 AC097639.2-201ENST00000603159 172 ntBASIC0.47□□□□□ -2.33
CTDNEP1O95476 Y_RNA.812-201ENST00000610788 101 ntBASIC0.47□□□□□ -2.33
CTDNEP1O95476 Y_RNA.784-201ENST00000613803 101 ntBASIC0.47□□□□□ -2.33
CTDNEP1O95476 Y_RNA.787-201ENST00000616522 101 ntBASIC0.47□□□□□ -2.33
CTDNEP1O95476 Y_RNA.780-201ENST00000617336 101 ntBASIC0.47□□□□□ -2.33
CTDNEP1O95476 Y_RNA.801-201ENST00000619005 101 ntBASIC0.47□□□□□ -2.33
CTDNEP1O95476 Z97988.1-201ENST00000637697 135 ntBASIC0.47□□□□□ -2.33
CTDNEP1O95476 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
CTDNEP1O95476 RNY1P8-201ENST00000383970 114 ntBASIC0.46□□□□□ -2.34
CTDNEP1O95476 RNU6-738P-201ENST00000384531 106 ntBASIC0.46□□□□□ -2.34
CTDNEP1O95476 MIR489-201ENST00000384923 84 ntBASIC0.46□□□□□ -2.34
CTDNEP1O95476 SNORD105-201ENST00000386910 85 ntBASIC0.46□□□□□ -2.34
CTDNEP1O95476 SNORD77.3-201ENST00000391113 65 ntBASIC0.46□□□□□ -2.34
CTDNEP1O95476 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.46□□□□□ -2.34
CTDNEP1O95476 Y_RNA.590-201ENST00000410140 107 ntBASIC0.46□□□□□ -2.34
CTDNEP1O95476 RNA5SP193-201ENST00000410353 107 ntBASIC0.46□□□□□ -2.34
CTDNEP1O95476 RNU2-55P-201ENST00000411146 174 ntBASIC0.46□□□□□ -2.34
CTDNEP1O95476 AL138752.1-201ENST00000452964 351 ntBASIC0.46□□□□□ -2.34
CTDNEP1O95476 AC107297.1-201ENST00000459991 176 ntBASIC0.46□□□□□ -2.34
CTDNEP1O95476 RPS29P24-201ENST00000486345 171 ntBASIC0.46□□□□□ -2.34
CTDNEP1O95476 RNU4-54P-201ENST00000516428 129 ntBASIC0.46□□□□□ -2.34
CTDNEP1O95476 AC008737.2-201ENST00000599446 118 ntBASIC0.46□□□□□ -2.34
CTDNEP1O95476 AC020891.4-201ENST00000605745 93 ntBASIC0.46□□□□□ -2.34
CTDNEP1O95476 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.46□□□□□ -2.34
CTDNEP1O95476 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
CTDNEP1O95476 MIR1-1-201ENST00000362147 71 ntBASIC0.45□□□□□ -2.34
CTDNEP1O95476 Y_RNA.277-201ENST00000364754 102 ntBASIC0.45□□□□□ -2.34
CTDNEP1O95476 RNU6-934P-201ENST00000365154 107 ntBASIC0.45□□□□□ -2.34
CTDNEP1O95476 Y_RNA.432-201ENST00000384087 111 ntBASIC0.45□□□□□ -2.34
CTDNEP1O95476 Y_RNA.440-201ENST00000384120 114 ntBASIC0.45□□□□□ -2.34
CTDNEP1O95476 MIR598-201ENST00000384868 97 ntBASIC0.45□□□□□ -2.34
CTDNEP1O95476 RNU1-119P-201ENST00000391122 165 ntBASIC0.45□□□□□ -2.34
CTDNEP1O95476 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.45□□□□□ -2.34
CTDNEP1O95476 RNU2-70P-201ENST00000410718 179 ntBASIC0.45□□□□□ -2.34
CTDNEP1O95476 RNU2-38P-201ENST00000410856 79 ntBASIC0.45□□□□□ -2.34
CTDNEP1O95476 RNU6-602P-201ENST00000411155 105 ntBASIC0.45□□□□□ -2.34
CTDNEP1O95476 AL358176.2-201ENST00000425769 204 ntBASIC0.45□□□□□ -2.34
CTDNEP1O95476 AC067940.1-201ENST00000458411 300 ntBASIC0.45□□□□□ -2.34
CTDNEP1O95476 RNU6-998P-201ENST00000515894 101 ntBASIC0.45□□□□□ -2.34
CTDNEP1O95476 RNA5SP153-201ENST00000516498 76 ntBASIC0.45□□□□□ -2.34
CTDNEP1O95476 AC011195.1-201ENST00000578177 177 ntBASIC0.45□□□□□ -2.34
CTDNEP1O95476 AC025627.3-201ENST00000582078 182 ntBASIC0.45□□□□□ -2.34
CTDNEP1O95476 Y_RNA.47-201ENST00000362697 108 ntBASIC0.44□□□□□ -2.34
CTDNEP1O95476 Y_RNA.145-201ENST00000363527 102 ntBASIC0.44□□□□□ -2.34
CTDNEP1O95476 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CTDNEP1O95476 RNY3P5-201ENST00000384127 102 ntBASIC0.44□□□□□ -2.34
CTDNEP1O95476 MIR568-201ENST00000385036 95 ntBASIC0.44□□□□□ -2.34
CTDNEP1O95476 RNU7-62P-201ENST00000458856 62 ntBASIC0.44□□□□□ -2.34
CTDNEP1O95476 RNU7-45P-201ENST00000459460 63 ntBASIC0.44□□□□□ -2.34
CTDNEP1O95476 RNY3P16-201ENST00000516338 101 ntBASIC0.44□□□□□ -2.34
CTDNEP1O95476 MIR4771-2-201ENST00000577758 74 ntBASIC0.44□□□□□ -2.34
CTDNEP1O95476 MIR4771-1-201ENST00000582617 74 ntBASIC0.44□□□□□ -2.34
CTDNEP1O95476 AP000753.3-201ENST00000604083 169 ntBASIC0.44□□□□□ -2.34
CTDNEP1O95476 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
CTDNEP1O95476 SNORD12C-201ENST00000386307 89 ntBASIC0.43□□□□□ -2.34
CTDNEP1O95476 SNORA26.6-201ENST00000391256 115 ntBASIC0.43□□□□□ -2.34
CTDNEP1O95476 MIR936-201ENST00000401264 98 ntBASIC0.43□□□□□ -2.34
CTDNEP1O95476 SNORD127-201ENST00000458892 86 ntBASIC0.43□□□□□ -2.34
CTDNEP1O95476 RNU2-11P-201ENST00000459191 187 ntBASIC0.43□□□□□ -2.34
CTDNEP1O95476 MTND1P19-201ENST00000511780 315 ntBASIC0.43□□□□□ -2.34
CTDNEP1O95476 Y_RNA.679-201ENST00000516416 91 ntBASIC0.43□□□□□ -2.34
CTDNEP1O95476 AC018659.1-201ENST00000551083 169 ntBASIC0.43□□□□□ -2.34
CTDNEP1O95476 AL360085.1-201ENST00000604713 532 ntBASIC0.43□□□□□ -2.34
CTDNEP1O95476 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.43□□□□□ -2.34
CTDNEP1O95476 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.43□□□□□ -2.34
CTDNEP1O95476 AC243829.3-201ENST00000622177 108 ntBASIC0.43□□□□□ -2.34
CTDNEP1O95476 AC010332.2-201ENST00000613083 1904 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 Y_RNA.7-201ENST00000362352 102 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 RNU6-1309P-201ENST00000363305 108 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 SNORA63-201ENST00000363450 132 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 Y_RNA.176-201ENST00000363815 109 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 Y_RNA.199-201ENST00000364014 102 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 Y_RNA.292-201ENST00000364904 97 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 Y_RNA.352-201ENST00000365439 102 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 RNU6-1189P-201ENST00000383958 107 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 Y_RNA.459-201ENST00000384251 102 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 SNORD38B-201ENST00000384690 67 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 MIR548I3-201ENST00000408378 149 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 RNU6-126P-201ENST00000516685 103 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 RNU7-53P-201ENST00000516705 60 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 MIR4711-201ENST00000578274 70 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 MIR3129-201ENST00000581095 76 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 MIR4804-201ENST00000581683 73 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 MIR4676-201ENST00000583078 72 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 AL136317.1-201ENST00000612653 226 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 AL442067.1-201ENST00000613261 223 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 SNORD38B-202ENST00000625943 69 ntBASIC0.42□□□□□ -2.34
CTDNEP1O95476 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
CTDNEP1O95476 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.42□□□□□ -2.34
CTDNEP1O95476 Y_RNA.54-201ENST00000362766 105 ntBASIC0.41□□□□□ -2.34
CTDNEP1O95476 Y_RNA.133-201ENST00000363428 110 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms