Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.88□□□□□ -2.11
TRIM38O00635 AL513423.1-201ENST00000621695 132 ntBASIC1.88□□□□□ -2.11
TRIM38O00635 MIR1245B-201ENST00000636115 69 ntBASIC1.88□□□□□ -2.11
TRIM38O00635 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.88□□□□□ -2.11
TRIM38O00635 MIR126-201ENST00000362291 85 ntBASIC1.87□□□□□ -2.11
TRIM38O00635 RNU6-573P-201ENST00000383938 106 ntBASIC1.87□□□□□ -2.11
TRIM38O00635 RNU6-1113P-201ENST00000384348 107 ntBASIC1.87□□□□□ -2.11
TRIM38O00635 MIR194-1-201ENST00000384892 85 ntBASIC1.87□□□□□ -2.11
TRIM38O00635 MIR522-201ENST00000385071 87 ntBASIC1.87□□□□□ -2.11
TRIM38O00635 MIR548O-201ENST00000408583 114 ntBASIC1.87□□□□□ -2.11
TRIM38O00635 AC108667.1-201ENST00000428618 249 ntBASIC1.87□□□□□ -2.11
TRIM38O00635 MTATP8P2-201ENST00000435212 202 ntBASIC1.87□□□□□ -2.11
TRIM38O00635 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.87□□□□□ -2.11
TRIM38O00635 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.87□□□□□ -2.11
TRIM38O00635 AP003327.1-201ENST00000529684 127 ntBASIC1.87□□□□□ -2.11
TRIM38O00635 AC022523.2-201ENST00000561045 150 ntBASIC1.87□□□□□ -2.11
TRIM38O00635 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.87□□□□□ -2.11
TRIM38O00635 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRIM38O00635 AC021506.2-201ENST00000612354 169 ntBASIC1.87□□□□□ -2.11
TRIM38O00635 RNY4P6-201ENST00000363667 96 ntBASIC1.86□□□□□ -2.11
TRIM38O00635 Y_RNA.265-201ENST00000364677 108 ntBASIC1.86□□□□□ -2.11
TRIM38O00635 Y_RNA.298-201ENST00000364960 107 ntBASIC1.86□□□□□ -2.11
TRIM38O00635 RNU6-690P-201ENST00000365242 106 ntBASIC1.86□□□□□ -2.11
TRIM38O00635 SNORA2.2-201ENST00000365473 135 ntBASIC1.86□□□□□ -2.11
TRIM38O00635 STAG3L5P-204ENST00000443759 179 ntBASIC1.86□□□□□ -2.11
TRIM38O00635 PGBD4P5-201ENST00000445958 426 ntBASIC1.86□□□□□ -2.11
TRIM38O00635 RNU6-904P-201ENST00000516206 101 ntBASIC1.86□□□□□ -2.11
TRIM38O00635 RNU7-25P-201ENST00000516544 62 ntBASIC1.86□□□□□ -2.11
TRIM38O00635 SUMO2P16-201ENST00000519475 264 ntBASIC1.86□□□□□ -2.11
TRIM38O00635 AC141557.1-201ENST00000540982 400 ntBASIC1.86□□□□□ -2.11
TRIM38O00635 SNORA77B-201ENST00000578179 125 ntBASIC1.86□□□□□ -2.11
TRIM38O00635 MALAT1.1-201ENST00000618249 95 ntBASIC1.86□□□□□ -2.11
TRIM38O00635 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.86□□□□□ -2.11
TRIM38O00635 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.86□□□□□ -2.11
TRIM38O00635 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRIM38O00635 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
TRIM38O00635 MIR424-201ENST00000362227 98 ntBASIC1.85□□□□□ -2.11
TRIM38O00635 Y_RNA.4-201ENST00000362333 112 ntBASIC1.85□□□□□ -2.11
TRIM38O00635 Y_RNA.164-201ENST00000363709 102 ntBASIC1.85□□□□□ -2.11
TRIM38O00635 Y_RNA.213-201ENST00000364178 111 ntBASIC1.85□□□□□ -2.11
TRIM38O00635 MIR934-201ENST00000401241 83 ntBASIC1.85□□□□□ -2.11
TRIM38O00635 RNU6-938P-201ENST00000411285 103 ntBASIC1.85□□□□□ -2.11
TRIM38O00635 SNRPGP14-201ENST00000435400 219 ntBASIC1.85□□□□□ -2.11
TRIM38O00635 snoU13.9-201ENST00000458927 103 ntBASIC1.85□□□□□ -2.11
TRIM38O00635 RNU7-123P-201ENST00000515911 60 ntBASIC1.85□□□□□ -2.11
TRIM38O00635 RN7SKP12-201ENST00000516275 143 ntBASIC1.85□□□□□ -2.11
TRIM38O00635 SNORD36C-201ENST00000516733 66 ntBASIC1.85□□□□□ -2.11
TRIM38O00635 RNU6-158P-201ENST00000517104 100 ntBASIC1.85□□□□□ -2.11
TRIM38O00635 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.85□□□□□ -2.11
TRIM38O00635 AC021443.1-201ENST00000604478 211 ntBASIC1.85□□□□□ -2.11
TRIM38O00635 Y_RNA.818-201ENST00000618813 71 ntBASIC1.85□□□□□ -2.11
TRIM38O00635 Y_RNA.220-201ENST00000364244 109 ntBASIC1.84□□□□□ -2.11
TRIM38O00635 Y_RNA.342-201ENST00000365352 113 ntBASIC1.84□□□□□ -2.11
TRIM38O00635 Y_RNA.547-201ENST00000384654 119 ntBASIC1.84□□□□□ -2.11
TRIM38O00635 MIR548D2-201ENST00000384955 97 ntBASIC1.84□□□□□ -2.11
TRIM38O00635 AL049830.1-201ENST00000468034 425 ntBASIC1.84□□□□□ -2.11
TRIM38O00635 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.84□□□□□ -2.11
TRIM38O00635 RNU6-638P-201ENST00000516582 104 ntBASIC1.84□□□□□ -2.11
TRIM38O00635 MIR4498-201ENST00000577599 66 ntBASIC1.84□□□□□ -2.11
TRIM38O00635 AC087685.1-201ENST00000587507 141 ntBASIC1.84□□□□□ -2.11
TRIM38O00635 HSPE1P19-201ENST00000603327 295 ntBASIC1.84□□□□□ -2.11
TRIM38O00635 AC006441.5-201ENST00000612680 209 ntBASIC1.84□□□□□ -2.11
TRIM38O00635 AC134878.1-201ENST00000619901 243 ntBASIC1.84□□□□□ -2.11
TRIM38O00635 ICE2P2-201ENST00000483823 2787 ntBASIC1.84□□□□□ -2.12
TRIM38O00635 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
TRIM38O00635 Y_RNA.37-201ENST00000362606 108 ntBASIC1.83□□□□□ -2.12
TRIM38O00635 Y_RNA.78-201ENST00000362970 110 ntBASIC1.83□□□□□ -2.12
TRIM38O00635 RNU6-268P-201ENST00000364174 107 ntBASIC1.83□□□□□ -2.12
TRIM38O00635 RNU6-1189P-201ENST00000383958 107 ntBASIC1.83□□□□□ -2.12
TRIM38O00635 Y_RNA.410-201ENST00000383992 113 ntBASIC1.83□□□□□ -2.12
TRIM38O00635 RNU6-203P-201ENST00000384038 104 ntBASIC1.83□□□□□ -2.12
TRIM38O00635 RNY1P6-201ENST00000384193 109 ntBASIC1.83□□□□□ -2.12
TRIM38O00635 MIR9-3-201ENST00000385084 90 ntBASIC1.83□□□□□ -2.12
TRIM38O00635 AC004965.1-201ENST00000413033 213 ntBASIC1.83□□□□□ -2.12
TRIM38O00635 RPS3AP1-201ENST00000413190 320 ntBASIC1.83□□□□□ -2.12
TRIM38O00635 RNU2-35P-201ENST00000516446 142 ntBASIC1.83□□□□□ -2.12
TRIM38O00635 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.83□□□□□ -2.12
TRIM38O00635 SNORD115-40-201ENST00000606510 82 ntBASIC1.83□□□□□ -2.12
TRIM38O00635 MIR8081-201ENST00000611533 95 ntBASIC1.83□□□□□ -2.12
TRIM38O00635 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.83□□□□□ -2.12
TRIM38O00635 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM38O00635 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
TRIM38O00635 RNY1P10-201ENST00000363268 113 ntBASIC1.82□□□□□ -2.12
TRIM38O00635 SNORD115-28-201ENST00000363931 81 ntBASIC1.82□□□□□ -2.12
TRIM38O00635 RNU6-457P-201ENST00000363999 107 ntBASIC1.82□□□□□ -2.12
TRIM38O00635 RNA5SP190-201ENST00000365222 118 ntBASIC1.82□□□□□ -2.12
TRIM38O00635 Y_RNA.440-201ENST00000384120 114 ntBASIC1.82□□□□□ -2.12
TRIM38O00635 RNU6-1152P-201ENST00000384576 107 ntBASIC1.82□□□□□ -2.12
TRIM38O00635 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.82□□□□□ -2.12
TRIM38O00635 RNU7-164P-201ENST00000459221 62 ntBASIC1.82□□□□□ -2.12
TRIM38O00635 SNORD13-201ENST00000459299 104 ntBASIC1.82□□□□□ -2.12
TRIM38O00635 AC108729.3-201ENST00000513484 108 ntBASIC1.82□□□□□ -2.12
TRIM38O00635 AC015688.6-201ENST00000577737 104 ntBASIC1.82□□□□□ -2.12
TRIM38O00635 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.82□□□□□ -2.12
TRIM38O00635 AC084768.2-201ENST00000622736 221 ntBASIC1.82□□□□□ -2.12
TRIM38O00635 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
TRIM38O00635 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRIM38O00635 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRIM38O00635 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
TRIM38O00635 MIR494-201ENST00000349529 81 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms