Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 SNORD115-42-201ENST00000364273 82 ntBASIC1.33□□□□□ -2.2
CHL1O00533 SNORD115-15-201ENST00000364809 81 ntBASIC1.33□□□□□ -2.2
CHL1O00533 SNORD115-1-201ENST00000364961 82 ntBASIC1.33□□□□□ -2.2
CHL1O00533 SNORD115-26-201ENST00000365067 82 ntBASIC1.33□□□□□ -2.2
CHL1O00533 SNORD115-10-201ENST00000365073 81 ntBASIC1.33□□□□□ -2.2
CHL1O00533 SNORD115-43-201ENST00000365503 82 ntBASIC1.33□□□□□ -2.2
CHL1O00533 SNORD115-36-201ENST00000365629 82 ntBASIC1.33□□□□□ -2.2
CHL1O00533 RNU6-449P-201ENST00000383914 107 ntBASIC1.33□□□□□ -2.2
CHL1O00533 SNORD116-18-201ENST00000383961 92 ntBASIC1.33□□□□□ -2.2
CHL1O00533 Y_RNA.440-201ENST00000384120 114 ntBASIC1.33□□□□□ -2.2
CHL1O00533 MIR499A-201ENST00000384903 122 ntBASIC1.33□□□□□ -2.2
CHL1O00533 MIR624-201ENST00000385217 97 ntBASIC1.33□□□□□ -2.2
CHL1O00533 snoU13.25-201ENST00000458945 104 ntBASIC1.33□□□□□ -2.2
CHL1O00533 MTND5P41-201ENST00000517498 206 ntBASIC1.33□□□□□ -2.2
CHL1O00533 MIR3646-201ENST00000578301 84 ntBASIC1.33□□□□□ -2.2
CHL1O00533 SNORD115-40-201ENST00000606510 82 ntBASIC1.33□□□□□ -2.2
CHL1O00533 MIR4791-201ENST00000607666 84 ntBASIC1.33□□□□□ -2.2
CHL1O00533 AC008133.2-201ENST00000624540 351 ntBASIC1.33□□□□□ -2.2
CHL1O00533 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CHL1O00533 RNY1P11-201ENST00000363759 113 ntBASIC1.32□□□□□ -2.2
CHL1O00533 RNU6-151P-201ENST00000364158 107 ntBASIC1.32□□□□□ -2.2
CHL1O00533 SNORA25.9-201ENST00000365087 128 ntBASIC1.32□□□□□ -2.2
CHL1O00533 SNORA27-201ENST00000384323 126 ntBASIC1.32□□□□□ -2.2
CHL1O00533 MIR222-201ENST00000384992 110 ntBASIC1.32□□□□□ -2.2
CHL1O00533 AC107297.1-201ENST00000459991 176 ntBASIC1.32□□□□□ -2.2
CHL1O00533 RNU6-255P-201ENST00000516957 105 ntBASIC1.32□□□□□ -2.2
CHL1O00533 RNU6-1212P-201ENST00000517023 104 ntBASIC1.32□□□□□ -2.2
CHL1O00533 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.32□□□□□ -2.2
CHL1O00533 MIR5197-201ENST00000583721 112 ntBASIC1.32□□□□□ -2.2
CHL1O00533 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.32□□□□□ -2.2
CHL1O00533 RNU4-38P-201ENST00000364472 129 ntBASIC1.31□□□□□ -2.2
CHL1O00533 SNORD114-22-201ENST00000365423 72 ntBASIC1.31□□□□□ -2.2
CHL1O00533 Y_RNA.537-201ENST00000384626 109 ntBASIC1.31□□□□□ -2.2
CHL1O00533 RNU6-1067P-201ENST00000384752 107 ntBASIC1.31□□□□□ -2.2
CHL1O00533 SNORD37.2-201ENST00000391075 66 ntBASIC1.31□□□□□ -2.2
CHL1O00533 SNORA75.5-201ENST00000391291 81 ntBASIC1.31□□□□□ -2.2
CHL1O00533 MIR1285-1-201ENST00000408593 84 ntBASIC1.31□□□□□ -2.2
CHL1O00533 RPL39P39-201ENST00000455840 151 ntBASIC1.31□□□□□ -2.2
CHL1O00533 AC243994.1-201ENST00000618627 109 ntBASIC1.31□□□□□ -2.2
CHL1O00533 Y_RNA.778-201ENST00000620203 90 ntBASIC1.31□□□□□ -2.2
CHL1O00533 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
CHL1O00533 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
CHL1O00533 MIR373-201ENST00000362273 69 ntBASIC1.3□□□□□ -2.2
CHL1O00533 RNA5SP327-201ENST00000362494 101 ntBASIC1.3□□□□□ -2.2
CHL1O00533 Y_RNA.170-201ENST00000363746 110 ntBASIC1.3□□□□□ -2.2
CHL1O00533 RNU4-11P-201ENST00000365287 132 ntBASIC1.3□□□□□ -2.2
CHL1O00533 RNA5SP247-201ENST00000411181 105 ntBASIC1.3□□□□□ -2.2
CHL1O00533 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.3□□□□□ -2.2
CHL1O00533 RPS29P28-201ENST00000446439 141 ntBASIC1.3□□□□□ -2.2
CHL1O00533 MTND5P32-201ENST00000560711 1802 ntBASIC1.29□□□□□ -2.2
CHL1O00533 SNORA24-201ENST00000384096 131 ntBASIC1.29□□□□□ -2.2
CHL1O00533 SNORA51.10-201ENST00000384418 136 ntBASIC1.29□□□□□ -2.2
CHL1O00533 Y_RNA.497-201ENST00000384447 98 ntBASIC1.29□□□□□ -2.2
CHL1O00533 RNU7-67P-201ENST00000459003 62 ntBASIC1.29□□□□□ -2.2
CHL1O00533 RPS29P24-201ENST00000486345 171 ntBASIC1.29□□□□□ -2.2
CHL1O00533 SCARNA15-202ENST00000516881 127 ntBASIC1.29□□□□□ -2.2
CHL1O00533 RNU6-958P-201ENST00000516995 106 ntBASIC1.29□□□□□ -2.2
CHL1O00533 AC112693.2-201ENST00000556538 232 ntBASIC1.29□□□□□ -2.2
CHL1O00533 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.29□□□□□ -2.2
CHL1O00533 MTND1P7-201ENST00000632801 297 ntBASIC1.29□□□□□ -2.2
CHL1O00533 MIR4251-201ENST00000635819 61 ntBASIC1.29□□□□□ -2.2
CHL1O00533 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.28□□□□□ -2.2
CHL1O00533 MIR342-201ENST00000362212 99 ntBASIC1.28□□□□□ -2.2
CHL1O00533 Y_RNA.52-201ENST00000362760 96 ntBASIC1.28□□□□□ -2.2
CHL1O00533 Y_RNA.351-201ENST00000365436 96 ntBASIC1.28□□□□□ -2.2
CHL1O00533 RNU6-1054P-201ENST00000411293 104 ntBASIC1.28□□□□□ -2.2
CHL1O00533 AL133373.1-201ENST00000497098 94 ntBASIC1.28□□□□□ -2.2
CHL1O00533 RNU6-1149P-201ENST00000516810 97 ntBASIC1.28□□□□□ -2.2
CHL1O00533 SNORA25.3-201ENST00000363205 127 ntBASIC1.27□□□□□ -2.21
CHL1O00533 Y_RNA.251-201ENST00000364551 99 ntBASIC1.27□□□□□ -2.21
CHL1O00533 MRPL35P3-201ENST00000421557 364 ntBASIC1.27□□□□□ -2.21
CHL1O00533 RNU7-96P-201ENST00000459535 64 ntBASIC1.27□□□□□ -2.21
CHL1O00533 AC048334.1-201ENST00000477975 159 ntBASIC1.27□□□□□ -2.21
CHL1O00533 RNU6-998P-201ENST00000515894 101 ntBASIC1.27□□□□□ -2.21
CHL1O00533 RNU7-200P-201ENST00000516105 62 ntBASIC1.27□□□□□ -2.21
CHL1O00533 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.27□□□□□ -2.21
CHL1O00533 AC131055.1-201ENST00000584626 316 ntBASIC1.27□□□□□ -2.21
CHL1O00533 AC012676.2-201ENST00000619258 186 ntBASIC1.27□□□□□ -2.21
CHL1O00533 RNU6-1062P-201ENST00000383908 107 ntBASIC1.26□□□□□ -2.21
CHL1O00533 Y_RNA.400-201ENST00000383963 111 ntBASIC1.26□□□□□ -2.21
CHL1O00533 RNU6-913P-201ENST00000390913 95 ntBASIC1.26□□□□□ -2.21
CHL1O00533 MIR1287-201ENST00000408492 90 ntBASIC1.26□□□□□ -2.21
CHL1O00533 AL035398.1-201ENST00000430869 322 ntBASIC1.26□□□□□ -2.21
CHL1O00533 RNU7-197P-201ENST00000458836 62 ntBASIC1.26□□□□□ -2.21
CHL1O00533 RNU2-11P-201ENST00000459191 187 ntBASIC1.26□□□□□ -2.21
CHL1O00533 RPS23P4-201ENST00000487908 423 ntBASIC1.26□□□□□ -2.21
CHL1O00533 MIR548AO-201ENST00000579992 96 ntBASIC1.26□□□□□ -2.21
CHL1O00533 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.26□□□□□ -2.21
CHL1O00533 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CHL1O00533 RNA5SP48-201ENST00000363969 126 ntBASIC1.25□□□□□ -2.21
CHL1O00533 Y_RNA.215-201ENST00000364204 112 ntBASIC1.25□□□□□ -2.21
CHL1O00533 AC245047.7-201ENST00000440265 293 ntBASIC1.25□□□□□ -2.21
CHL1O00533 RNU7-80P-201ENST00000459562 61 ntBASIC1.25□□□□□ -2.21
CHL1O00533 SNORA31.2-201ENST00000516019 134 ntBASIC1.25□□□□□ -2.21
CHL1O00533 SNORA31.4-201ENST00000516049 129 ntBASIC1.25□□□□□ -2.21
CHL1O00533 RNU6-346P-201ENST00000516288 111 ntBASIC1.25□□□□□ -2.21
CHL1O00533 AP003716.2-201ENST00000528260 108 ntBASIC1.25□□□□□ -2.21
CHL1O00533 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.25□□□□□ -2.21
CHL1O00533 Y_RNA.506-201ENST00000384494 102 ntBASIC1.24□□□□□ -2.21
CHL1O00533 MIR532-201ENST00000385025 91 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms