Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
O00370 RNU6-1023P-201ENST00000516137 106 ntBASIC0.91□□□□□ -2.26
O00370 MIR4744-201ENST00000581563 82 ntBASIC0.91□□□□□ -2.26
O00370 AC131055.1-201ENST00000584626 316 ntBASIC0.91□□□□□ -2.26
O00370 AP000942.4-201ENST00000604811 241 ntBASIC0.91□□□□□ -2.26
O00370 AC211469.2-201ENST00000605461 205 ntBASIC0.91□□□□□ -2.26
O00370 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.9□□□□□ -2.27
O00370 RNU6-396P-201ENST00000365369 105 ntBASIC0.9□□□□□ -2.27
O00370 SNORA1-201ENST00000384107 130 ntBASIC0.9□□□□□ -2.27
O00370 RNU4-70P-201ENST00000384579 139 ntBASIC0.9□□□□□ -2.27
O00370 Y_RNA.571-201ENST00000384753 98 ntBASIC0.9□□□□□ -2.27
O00370 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.9□□□□□ -2.27
O00370 MIR1302-7-201ENST00000408841 72 ntBASIC0.9□□□□□ -2.27
O00370 RNU6-938P-201ENST00000411285 103 ntBASIC0.9□□□□□ -2.27
O00370 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.9□□□□□ -2.27
O00370 RNU4-71P-201ENST00000516258 113 ntBASIC0.9□□□□□ -2.27
O00370 RNA5SP153-201ENST00000516498 76 ntBASIC0.9□□□□□ -2.27
O00370 MIR2115-201ENST00000516657 100 ntBASIC0.9□□□□□ -2.27
O00370 RNU6-197P-201ENST00000516680 100 ntBASIC0.9□□□□□ -2.27
O00370 AP003716.2-201ENST00000528260 108 ntBASIC0.9□□□□□ -2.27
O00370 RNU1-36P-201ENST00000365130 165 ntBASIC0.89□□□□□ -2.27
O00370 RNU6-1189P-201ENST00000383958 107 ntBASIC0.89□□□□□ -2.27
O00370 Y_RNA.540-201ENST00000384638 111 ntBASIC0.89□□□□□ -2.27
O00370 RPS29P24-201ENST00000486345 171 ntBASIC0.89□□□□□ -2.27
O00370 MIR4308-201ENST00000580634 81 ntBASIC0.89□□□□□ -2.27
O00370 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
O00370 MIR200A-201ENST00000384875 90 ntBASIC0.88□□□□□ -2.27
O00370 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
O00370 RNU6-578P-201ENST00000390980 103 ntBASIC0.88□□□□□ -2.27
O00370 SNORA40.5-201ENST00000391061 128 ntBASIC0.88□□□□□ -2.27
O00370 RNU2-64P-201ENST00000411315 191 ntBASIC0.88□□□□□ -2.27
O00370 HMGN1P33-201ENST00000432945 451 ntBASIC0.88□□□□□ -2.27
O00370 SEPT7P4-201ENST00000437076 306 ntBASIC0.88□□□□□ -2.27
O00370 AC067940.1-201ENST00000458411 300 ntBASIC0.88□□□□□ -2.27
O00370 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.88□□□□□ -2.27
O00370 PSMC1P5-201ENST00000512850 177 ntBASIC0.88□□□□□ -2.27
O00370 AC004817.2-201ENST00000561794 651 ntBASIC0.88□□□□□ -2.27
O00370 AC013244.2-201ENST00000603396 103 ntBASIC0.88□□□□□ -2.27
O00370 AP000753.3-201ENST00000604083 169 ntBASIC0.88□□□□□ -2.27
O00370 AC108706.1-201ENST00000611053 297 ntBASIC0.88□□□□□ -2.27
O00370 MIR302B-201ENST00000362188 73 ntBASIC0.87□□□□□ -2.27
O00370 Y_RNA.489-201ENST00000384410 101 ntBASIC0.87□□□□□ -2.27
O00370 MIR7-2-201ENST00000384970 110 ntBASIC0.87□□□□□ -2.27
O00370 MIR613-201ENST00000385248 95 ntBASIC0.87□□□□□ -2.27
O00370 SNORD89-201ENST00000390981 114 ntBASIC0.87□□□□□ -2.27
O00370 AC090844.1-201ENST00000422019 156 ntBASIC0.87□□□□□ -2.27
O00370 AL392103.1-201ENST00000447000 198 ntBASIC0.87□□□□□ -2.27
O00370 RNU2-11P-201ENST00000459191 187 ntBASIC0.87□□□□□ -2.27
O00370 snoU13.16-201ENST00000459350 104 ntBASIC0.87□□□□□ -2.27
O00370 RNU2-13P-201ENST00000515909 113 ntBASIC0.87□□□□□ -2.27
O00370 RNA5SP436-201ENST00000516020 115 ntBASIC0.87□□□□□ -2.27
O00370 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
O00370 RNU7-53P-201ENST00000516705 60 ntBASIC0.87□□□□□ -2.27
O00370 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
O00370 Y_RNA.83-201ENST00000363005 113 ntBASIC0.86□□□□□ -2.27
O00370 Y_RNA.200-201ENST00000364018 102 ntBASIC0.86□□□□□ -2.27
O00370 RNU6-125P-201ENST00000384505 107 ntBASIC0.86□□□□□ -2.27
O00370 RNU6-913P-201ENST00000390913 95 ntBASIC0.86□□□□□ -2.27
O00370 AC006461.1-201ENST00000412637 326 ntBASIC0.86□□□□□ -2.27
O00370 RPS3AP1-201ENST00000413190 320 ntBASIC0.86□□□□□ -2.27
O00370 AL035398.1-201ENST00000430869 322 ntBASIC0.86□□□□□ -2.27
O00370 RNA5SP480-201ENST00000516840 109 ntBASIC0.86□□□□□ -2.27
O00370 RNU11-2P-201ENST00000516898 142 ntBASIC0.86□□□□□ -2.27
O00370 RNU6-1271P-201ENST00000517049 105 ntBASIC0.86□□□□□ -2.27
O00370 AC036111.3-201ENST00000526389 112 ntBASIC0.86□□□□□ -2.27
O00370 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.86□□□□□ -2.27
O00370 PVT1_3.1-201ENST00000620853 95 ntBASIC0.86□□□□□ -2.27
O00370 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
O00370 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
O00370 SNORD113.3-201ENST00000364630 78 ntBASIC0.85□□□□□ -2.27
O00370 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
O00370 SNORD77.3-201ENST00000391113 65 ntBASIC0.85□□□□□ -2.27
O00370 MIR548I3-201ENST00000408378 149 ntBASIC0.85□□□□□ -2.27
O00370 RNU6-1190P-201ENST00000410811 104 ntBASIC0.85□□□□□ -2.27
O00370 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
O00370 AC097639.2-201ENST00000603159 172 ntBASIC0.85□□□□□ -2.27
O00370 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.85□□□□□ -2.27
O00370 AL596211.1-201ENST00000569873 2277 ntBASIC0.84□□□□□ -2.27
O00370 MIR411-201ENST00000362239 96 ntBASIC0.84□□□□□ -2.27
O00370 Y_RNA.188-201ENST00000363952 111 ntBASIC0.84□□□□□ -2.27
O00370 SNORA1.1-201ENST00000364671 133 ntBASIC0.84□□□□□ -2.27
O00370 Y_RNA.351-201ENST00000365436 96 ntBASIC0.84□□□□□ -2.27
O00370 Y_RNA.410-201ENST00000383992 113 ntBASIC0.84□□□□□ -2.27
O00370 MIR598-201ENST00000384868 97 ntBASIC0.84□□□□□ -2.27
O00370 RNU6-613P-201ENST00000410412 108 ntBASIC0.84□□□□□ -2.27
O00370 AC015818.7-201ENST00000428754 109 ntBASIC0.84□□□□□ -2.27
O00370 FABP5P4-201ENST00000437203 171 ntBASIC0.84□□□□□ -2.27
O00370 AC087499.7-201ENST00000441958 109 ntBASIC0.84□□□□□ -2.27
O00370 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.84□□□□□ -2.27
O00370 RNU7-45P-201ENST00000459460 63 ntBASIC0.84□□□□□ -2.27
O00370 RNU7-96P-201ENST00000459535 64 ntBASIC0.84□□□□□ -2.27
O00370 RNU7-70P-201ENST00000516941 66 ntBASIC0.84□□□□□ -2.27
O00370 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.84□□□□□ -2.27
O00370 AC106800.4-201ENST00000614905 153 ntBASIC0.84□□□□□ -2.27
O00370 MIR376A2-201ENST00000636782 80 ntBASIC0.84□□□□□ -2.27
O00370 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.28
O00370 AC023934.1-201ENST00000574529 2389 ntBASIC0.83□□□□□ -2.28
O00370 RNU6-1020P-201ENST00000363684 107 ntBASIC0.83□□□□□ -2.28
O00370 RNU6-1335P-201ENST00000365426 107 ntBASIC0.83□□□□□ -2.28
O00370 RNU6-47P-201ENST00000383866 107 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms