Protein–RNA interactions for Protein: J3QKU1

Uncharacterized protein, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
J3QKU1 RNU6-693P-201ENST00000516134 107 ntBASIC0.44□□□□□ -2.34
J3QKU1 SNORA18.4-201ENST00000516440 124 ntBASIC0.44□□□□□ -2.34
J3QKU1 RNU6-1007P-201ENST00000516586 107 ntBASIC0.44□□□□□ -2.34
J3QKU1 Y_RNA.777-201ENST00000516982 102 ntBASIC0.44□□□□□ -2.34
J3QKU1 RNU6-111P-201ENST00000517179 105 ntBASIC0.44□□□□□ -2.34
J3QKU1 AC022559.1-201ENST00000520905 205 ntBASIC0.44□□□□□ -2.34
J3QKU1 AC131055.1-201ENST00000584626 316 ntBASIC0.44□□□□□ -2.34
J3QKU1 Y_RNA.771-201ENST00000598668 102 ntBASIC0.44□□□□□ -2.34
J3QKU1 HSPE1P19-201ENST00000603327 295 ntBASIC0.44□□□□□ -2.34
J3QKU1 MIR4791-201ENST00000607666 84 ntBASIC0.44□□□□□ -2.34
J3QKU1 Y_RNA.802-201ENST00000614892 130 ntBASIC0.44□□□□□ -2.34
J3QKU1 Y_RNA.789-201ENST00000622480 102 ntBASIC0.44□□□□□ -2.34
J3QKU1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.44□□□□□ -2.34
J3QKU1 MIR4251-201ENST00000635819 61 ntBASIC0.44□□□□□ -2.34
J3QKU1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
J3QKU1 RNU6-369P-201ENST00000362515 102 ntBASIC0.43□□□□□ -2.34
J3QKU1 Y_RNA.149-201ENST00000363558 117 ntBASIC0.43□□□□□ -2.34
J3QKU1 Y_RNA.304-201ENST00000365011 112 ntBASIC0.43□□□□□ -2.34
J3QKU1 RNY4P28-201ENST00000365281 93 ntBASIC0.43□□□□□ -2.34
J3QKU1 RNU6-47P-201ENST00000383866 107 ntBASIC0.43□□□□□ -2.34
J3QKU1 SNORA22-201ENST00000383907 134 ntBASIC0.43□□□□□ -2.34
J3QKU1 RNU6-144P-201ENST00000383951 107 ntBASIC0.43□□□□□ -2.34
J3QKU1 RNY1P8-201ENST00000383970 114 ntBASIC0.43□□□□□ -2.34
J3QKU1 SNORA22C-201ENST00000384614 134 ntBASIC0.43□□□□□ -2.34
J3QKU1 SNORA8.3-201ENST00000384679 139 ntBASIC0.43□□□□□ -2.34
J3QKU1 MIR526A2-201ENST00000390198 65 ntBASIC0.43□□□□□ -2.34
J3QKU1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.43□□□□□ -2.34
J3QKU1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.43□□□□□ -2.34
J3QKU1 AC244023.1-201ENST00000426884 112 ntBASIC0.43□□□□□ -2.34
J3QKU1 AL035398.1-201ENST00000430869 322 ntBASIC0.43□□□□□ -2.34
J3QKU1 ACA64.5-201ENST00000516207 127 ntBASIC0.43□□□□□ -2.34
J3QKU1 RNU6-1045P-201ENST00000516321 107 ntBASIC0.43□□□□□ -2.34
J3QKU1 RNU6-830P-201ENST00000516353 107 ntBASIC0.43□□□□□ -2.34
J3QKU1 Y_RNA.679-201ENST00000516416 91 ntBASIC0.43□□□□□ -2.34
J3QKU1 AC109810.1-201ENST00000534066 224 ntBASIC0.43□□□□□ -2.34
J3QKU1 MIR4305-201ENST00000583252 102 ntBASIC0.43□□□□□ -2.34
J3QKU1 AC242498.1-201ENST00000604134 111 ntBASIC0.43□□□□□ -2.34
J3QKU1 RNU2-4P-201ENST00000606190 192 ntBASIC0.43□□□□□ -2.34
J3QKU1 AC243994.1-201ENST00000618627 109 ntBASIC0.43□□□□□ -2.34
J3QKU1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.43□□□□□ -2.34
J3QKU1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
J3QKU1 Y_RNA.37-201ENST00000362606 108 ntBASIC0.42□□□□□ -2.34
J3QKU1 RNU1-124P-201ENST00000363861 145 ntBASIC0.42□□□□□ -2.34
J3QKU1 Y_RNA.185-201ENST00000363894 100 ntBASIC0.42□□□□□ -2.34
J3QKU1 SNORD114-15-201ENST00000364687 72 ntBASIC0.42□□□□□ -2.34
J3QKU1 Y_RNA.634-201ENST00000364811 113 ntBASIC0.42□□□□□ -2.34
J3QKU1 RNU6-1138P-201ENST00000365359 106 ntBASIC0.42□□□□□ -2.34
J3QKU1 Y_RNA.370-201ENST00000365589 108 ntBASIC0.42□□□□□ -2.34
J3QKU1 Y_RNA.447-201ENST00000384184 113 ntBASIC0.42□□□□□ -2.34
J3QKU1 SNORD38C-201ENST00000384381 69 ntBASIC0.42□□□□□ -2.34
J3QKU1 MIR19B1-201ENST00000384829 87 ntBASIC0.42□□□□□ -2.34
J3QKU1 MIR92A1-201ENST00000385233 78 ntBASIC0.42□□□□□ -2.34
J3QKU1 MIR618-201ENST00000385287 98 ntBASIC0.42□□□□□ -2.34
J3QKU1 MIR802-201ENST00000390235 94 ntBASIC0.42□□□□□ -2.34
J3QKU1 RNU6-1248P-201ENST00000391096 64 ntBASIC0.42□□□□□ -2.34
J3QKU1 SNORD77.3-201ENST00000391113 65 ntBASIC0.42□□□□□ -2.34
J3QKU1 Y_RNA.626-201ENST00000411288 95 ntBASIC0.42□□□□□ -2.34
J3QKU1 HMGN2P32-201ENST00000444648 269 ntBASIC0.42□□□□□ -2.34
J3QKU1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.42□□□□□ -2.34
J3QKU1 RNU6-958P-201ENST00000516995 106 ntBASIC0.42□□□□□ -2.34
J3QKU1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.42□□□□□ -2.34
J3QKU1 AC037487.3-201ENST00000606668 112 ntBASIC0.42□□□□□ -2.34
J3QKU1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC0.42□□□□□ -2.34
J3QKU1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.42□□□□□ -2.34
J3QKU1 MIR342-201ENST00000362212 99 ntBASIC0.41□□□□□ -2.34
J3QKU1 RNU6-508P-201ENST00000363231 103 ntBASIC0.41□□□□□ -2.34
J3QKU1 Y_RNA.241-201ENST00000364470 117 ntBASIC0.41□□□□□ -2.34
J3QKU1 SNORA25.8-201ENST00000364831 128 ntBASIC0.41□□□□□ -2.34
J3QKU1 RNU6-818P-201ENST00000364837 108 ntBASIC0.41□□□□□ -2.34
J3QKU1 Y_RNA.288-201ENST00000364854 92 ntBASIC0.41□□□□□ -2.34
J3QKU1 Y_RNA.352-201ENST00000365439 102 ntBASIC0.41□□□□□ -2.34
J3QKU1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
J3QKU1 SNORA51.10-201ENST00000384418 136 ntBASIC0.41□□□□□ -2.34
J3QKU1 SNORA80D-201ENST00000384488 135 ntBASIC0.41□□□□□ -2.34
J3QKU1 SNORD83.1-201ENST00000411362 77 ntBASIC0.41□□□□□ -2.34
J3QKU1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.41□□□□□ -2.34
J3QKU1 RPL39P39-201ENST00000455840 151 ntBASIC0.41□□□□□ -2.34
J3QKU1 RNU6-758P-201ENST00000516292 89 ntBASIC0.41□□□□□ -2.34
J3QKU1 RNU7-43P-201ENST00000516554 64 ntBASIC0.41□□□□□ -2.34
J3QKU1 AP003484.1-201ENST00000530974 250 ntBASIC0.41□□□□□ -2.34
J3QKU1 MIR3129-201ENST00000581095 76 ntBASIC0.41□□□□□ -2.34
J3QKU1 MIR2681-201ENST00000581814 105 ntBASIC0.41□□□□□ -2.34
J3QKU1 AL357312.1-201ENST00000603879 298 ntBASIC0.41□□□□□ -2.34
J3QKU1 SEPT14P17-201ENST00000617978 177 ntBASIC0.41□□□□□ -2.34
J3QKU1 RNU6-888P-201ENST00000363010 101 ntBASIC0.4□□□□□ -2.35
J3QKU1 SNORD115-28-201ENST00000363931 81 ntBASIC0.4□□□□□ -2.35
J3QKU1 Y_RNA.199-201ENST00000364014 102 ntBASIC0.4□□□□□ -2.35
J3QKU1 RNA5SP368-201ENST00000364298 116 ntBASIC0.4□□□□□ -2.35
J3QKU1 SNORA2B-201ENST00000384583 137 ntBASIC0.4□□□□□ -2.35
J3QKU1 MIR616-201ENST00000385293 97 ntBASIC0.4□□□□□ -2.35
J3QKU1 SNORD12C-201ENST00000386307 89 ntBASIC0.4□□□□□ -2.35
J3QKU1 SNORD89-201ENST00000390981 114 ntBASIC0.4□□□□□ -2.35
J3QKU1 RNA5SP496-201ENST00000391240 109 ntBASIC0.4□□□□□ -2.35
J3QKU1 RNU6-197P-201ENST00000516680 100 ntBASIC0.4□□□□□ -2.35
J3QKU1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.4□□□□□ -2.35
J3QKU1 AC087685.1-201ENST00000587507 141 ntBASIC0.4□□□□□ -2.35
J3QKU1 AC062037.2-201ENST00000610137 73 ntBASIC0.4□□□□□ -2.35
J3QKU1 MIR6740-201ENST00000618268 113 ntBASIC0.4□□□□□ -2.35
J3QKU1 AC141273.2-201ENST00000618989 130 ntBASIC0.4□□□□□ -2.35
J3QKU1 U6.106-201ENST00000636360 105 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms