Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 SNORD115-12-201ENST00000362583 82 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-29-201ENST00000362834 82 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-9-201ENST00000362912 82 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-21-201ENST00000362963 81 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-14-201ENST00000363090 81 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-13-201ENST00000363358 82 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-41-201ENST00000363608 82 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-11-201ENST00000363616 82 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-5-201ENST00000363633 82 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-39-201ENST00000363694 82 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.168-201ENST00000363740 102 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-4-201ENST00000363810 82 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.176-201ENST00000363815 109 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-16-201ENST00000363887 82 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-6-201ENST00000363942 82 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-42-201ENST00000364273 82 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-15-201ENST00000364809 81 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-1-201ENST00000364961 82 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-26-201ENST00000365067 82 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-10-201ENST00000365073 81 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 RNU6-580P-201ENST00000365159 107 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORA1.2-201ENST00000365189 134 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-43-201ENST00000365503 82 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-36-201ENST00000365629 82 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD24-201ENST00000383884 75 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.393-201ENST00000383936 102 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORA27-201ENST00000384323 126 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 RNY1P4-201ENST00000384595 115 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 RNU6-1011P-201ENST00000384668 107 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 MIR616-201ENST00000385293 97 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD12C-201ENST00000386307 89 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 MIR1827-201ENST00000408549 66 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 AC244098.3-201ENST00000424803 96 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 RNU6-1299P-201ENST00000516316 100 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 MIR2115-201ENST00000516657 100 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 AC004817.2-201ENST00000561794 651 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 MIR3129-201ENST00000581095 76 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 MIR4653-201ENST00000585107 83 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-40-201ENST00000606510 82 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 SNORD114-26-201ENST00000363543 72 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 SNORD27-201ENST00000363981 72 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 Y_RNA.199-201ENST00000364014 102 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 RNU6-923P-201ENST00000364753 107 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 Y_RNA.292-201ENST00000364904 97 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 Y_RNA.308-201ENST00000365043 101 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 RNU6-1336P-201ENST00000383886 109 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 Y_RNA.440-201ENST00000384120 114 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 SNORA40.5-201ENST00000391061 128 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 RNU6-493P-201ENST00000391321 108 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 MIR936-201ENST00000401264 98 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 RNU2-70P-201ENST00000410718 179 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 RNU6-602P-201ENST00000411155 105 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 FABP5P4-201ENST00000437203 171 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 U7.7-201ENST00000459276 60 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 AC113410.1-201ENST00000505029 247 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 RNU6-327P-201ENST00000516270 127 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 AC011195.1-201ENST00000578177 177 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 AC099654.10-201ENST00000640395 161 ntBASIC0.46□□□□□ -2.34
TRAV40A0A0B4J280 AC010332.2-201ENST00000613083 1904 ntBASIC0.45□□□□□ -2.34
TRAV40A0A0B4J280 RNU6-934P-201ENST00000365154 107 ntBASIC0.45□□□□□ -2.34
TRAV40A0A0B4J280 Y_RNA.432-201ENST00000384087 111 ntBASIC0.45□□□□□ -2.34
TRAV40A0A0B4J280 MIR92A1-201ENST00000385233 78 ntBASIC0.45□□□□□ -2.34
TRAV40A0A0B4J280 AC087499.4-201ENST00000448505 178 ntBASIC0.45□□□□□ -2.34
TRAV40A0A0B4J280 RNU2-11P-201ENST00000459191 187 ntBASIC0.45□□□□□ -2.34
TRAV40A0A0B4J280 snoU13.16-201ENST00000459350 104 ntBASIC0.45□□□□□ -2.34
TRAV40A0A0B4J280 RPS29P24-201ENST00000486345 171 ntBASIC0.45□□□□□ -2.34
TRAV40A0A0B4J280 RNU6-504P-201ENST00000516568 104 ntBASIC0.45□□□□□ -2.34
TRAV40A0A0B4J280 MIR4771-2-201ENST00000577758 74 ntBASIC0.45□□□□□ -2.34
TRAV40A0A0B4J280 MIR4662B-201ENST00000579498 81 ntBASIC0.45□□□□□ -2.34
TRAV40A0A0B4J280 MIR4308-201ENST00000580634 81 ntBASIC0.45□□□□□ -2.34
TRAV40A0A0B4J280 MIR4771-1-201ENST00000582617 74 ntBASIC0.45□□□□□ -2.34
TRAV40A0A0B4J280 MIR6779-201ENST00000617283 64 ntBASIC0.45□□□□□ -2.34
TRAV40A0A0B4J280 MIR5087-201ENST00000635826 76 ntBASIC0.45□□□□□ -2.34
TRAV40A0A0B4J280 Z97988.1-201ENST00000637697 135 ntBASIC0.45□□□□□ -2.34
TRAV40A0A0B4J280 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 Y_RNA.65-201ENST00000362846 100 ntBASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 RNY4P28-201ENST00000365281 93 ntBASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 RNU6-1067P-201ENST00000384752 107 ntBASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 SNORD105-201ENST00000386910 85 ntBASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 SNORA26.6-201ENST00000391256 115 ntBASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 AC098934.3-201ENST00000430450 190 ntBASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 RNU7-73P-201ENST00000458743 63 ntBASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 RNU7-62P-201ENST00000458856 62 ntBASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 RNU6-998P-201ENST00000515894 101 ntBASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 RNU6-1110P-201ENST00000516462 101 ntBASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 MIR5688-201ENST00000580619 83 ntBASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 AC097639.2-201ENST00000603159 172 ntBASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 AC008608.1-201ENST00000603910 127 ntBASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 RNU2-4P-201ENST00000606190 192 ntBASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 AC104465.1-201ENST00000611365 139 ntBASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 uc_338.17-201ENST00000619633 179 ntBASIC0.44□□□□□ -2.34
TRAV40A0A0B4J280 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
TRAV40A0A0B4J280 MTND5P32-201ENST00000560711 1802 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms