Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC100767.1-201ENST00000528178 123 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 AC012433.1-201ENST00000588916 398 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 AL590095.2-201ENST00000604136 117 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-40-201ENST00000606510 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.812-201ENST00000610788 101 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.784-201ENST00000613803 101 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 U2.14-201ENST00000615943 113 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.787-201ENST00000616522 101 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.780-201ENST00000617336 101 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.801-201ENST00000619005 101 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORA63C-201ENST00000364578 129 ntBASIC0.77□□□□□ -2.29
PCDHGA1Q9Y5H4 MIR606-201ENST00000384851 96 ntBASIC0.77□□□□□ -2.29
PCDHGA1Q9Y5H4 MIR518F-201ENST00000384973 87 ntBASIC0.77□□□□□ -2.29
PCDHGA1Q9Y5H4 MT-TW-201ENST00000387382 68 ntBASIC0.77□□□□□ -2.29
PCDHGA1Q9Y5H4 SNORA40.5-201ENST00000391061 128 ntBASIC0.77□□□□□ -2.29
PCDHGA1Q9Y5H4 MIR548F4-201ENST00000408515 105 ntBASIC0.77□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU6-651P-201ENST00000411040 105 ntBASIC0.77□□□□□ -2.29
PCDHGA1Q9Y5H4 AL035398.1-201ENST00000430869 322 ntBASIC0.77□□□□□ -2.29
PCDHGA1Q9Y5H4 snoU13.16-201ENST00000459350 104 ntBASIC0.77□□□□□ -2.29
PCDHGA1Q9Y5H4 AC113410.1-201ENST00000505029 247 ntBASIC0.77□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU6-693P-201ENST00000516134 107 ntBASIC0.77□□□□□ -2.29
PCDHGA1Q9Y5H4 MIR1273G-201ENST00000577677 100 ntBASIC0.77□□□□□ -2.29
PCDHGA1Q9Y5H4 MIR4282-201ENST00000583613 67 ntBASIC0.77□□□□□ -2.29
PCDHGA1Q9Y5H4 AL353765.1-201ENST00000605514 183 ntBASIC0.77□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU6-94P-201ENST00000607728 107 ntBASIC0.77□□□□□ -2.29
PCDHGA1Q9Y5H4 U6.104-201ENST00000637979 90 ntBASIC0.77□□□□□ -2.29
PCDHGA1Q9Y5H4 Y_RNA.37-201ENST00000362606 108 ntBASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 Y_RNA.168-201ENST00000363740 102 ntBASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 Y_RNA.241-201ENST00000364470 117 ntBASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 RNY3P5-201ENST00000384127 102 ntBASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 SNORD61-201ENST00000384252 73 ntBASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 Y_RNA.518-201ENST00000384552 113 ntBASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 SNORA2B-201ENST00000384583 137 ntBASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 MIR548A2-201ENST00000384956 97 ntBASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 MT-TN-201ENST00000387400 73 ntBASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 RNA5SP95-201ENST00000410319 137 ntBASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU6-938P-201ENST00000411285 103 ntBASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 AL606490.4-201ENST00000423117 127 ntBASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 AC104465.1-201ENST00000611365 139 ntBASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 MIR6835-201ENST00000621552 64 ntBASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
PCDHGA1Q9Y5H4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU6-888P-201ENST00000363010 101 ntBASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 SNORA63-201ENST00000363450 132 ntBASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 Y_RNA.145-201ENST00000363527 102 ntBASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 SNORD114-2-201ENST00000363953 78 ntBASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU6-580P-201ENST00000365159 107 ntBASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 Y_RNA.374-201ENST00000365606 101 ntBASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 Y_RNA.483-201ENST00000384380 101 ntBASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 Y_RNA.574-201ENST00000384766 95 ntBASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 SNORD89-201ENST00000390981 114 ntBASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 SNORA26-201ENST00000391286 122 ntBASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 MIR936-201ENST00000401264 98 ntBASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU7-67P-201ENST00000459003 62 ntBASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU6-1299P-201ENST00000516316 100 ntBASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU6-504P-201ENST00000516568 104 ntBASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
PCDHGA1Q9Y5H4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.74□□□□□ -2.29
PCDHGA1Q9Y5H4 MIR377-201ENST00000362145 69 ntBASIC0.74□□□□□ -2.29
PCDHGA1Q9Y5H4 Y_RNA.66-201ENST00000362862 102 ntBASIC0.74□□□□□ -2.29
PCDHGA1Q9Y5H4 RNA5SP457-201ENST00000363657 124 ntBASIC0.74□□□□□ -2.29
PCDHGA1Q9Y5H4 Y_RNA.461-201ENST00000384263 103 ntBASIC0.74□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU6-472P-201ENST00000384299 107 ntBASIC0.74□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU6-994P-201ENST00000410507 111 ntBASIC0.74□□□□□ -2.29
PCDHGA1Q9Y5H4 SNRPGP8-201ENST00000454064 226 ntBASIC0.74□□□□□ -2.29
PCDHGA1Q9Y5H4 SNORA18.4-201ENST00000516440 124 ntBASIC0.74□□□□□ -2.29
PCDHGA1Q9Y5H4 AP003484.1-201ENST00000530974 250 ntBASIC0.74□□□□□ -2.29
PCDHGA1Q9Y5H4 AC008737.2-201ENST00000599446 118 ntBASIC0.74□□□□□ -2.29
PCDHGA1Q9Y5H4 AP000942.4-201ENST00000604811 241 ntBASIC0.74□□□□□ -2.29
PCDHGA1Q9Y5H4 AC134878.1-201ENST00000619901 243 ntBASIC0.74□□□□□ -2.29
PCDHGA1Q9Y5H4 AC010487.4-201ENST00000637027 61 ntBASIC0.74□□□□□ -2.29
PCDHGA1Q9Y5H4 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
PCDHGA1Q9Y5H4 AC023934.1-201ENST00000574529 2389 ntBASIC0.74□□□□□ -2.29
PCDHGA1Q9Y5H4 SNORD114-23-201ENST00000363536 72 ntBASIC0.73□□□□□ -2.29
PCDHGA1Q9Y5H4 Y_RNA.176-201ENST00000363815 109 ntBASIC0.73□□□□□ -2.29
PCDHGA1Q9Y5H4 snoU2_19.4-201ENST00000364329 80 ntBASIC0.73□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU6-484P-201ENST00000384016 107 ntBASIC0.73□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU6-125P-201ENST00000384505 107 ntBASIC0.73□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU6-738P-201ENST00000384531 106 ntBASIC0.73□□□□□ -2.29
PCDHGA1Q9Y5H4 MIR616-201ENST00000385293 97 ntBASIC0.73□□□□□ -2.29
PCDHGA1Q9Y5H4 MT-TT-201ENST00000387460 66 ntBASIC0.73□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
PCDHGA1Q9Y5H4 Y_RNA.590-201ENST00000410140 107 ntBASIC0.73□□□□□ -2.29
PCDHGA1Q9Y5H4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.73□□□□□ -2.29
PCDHGA1Q9Y5H4 RNA5SP153-201ENST00000516498 76 ntBASIC0.73□□□□□ -2.29
PCDHGA1Q9Y5H4 RNU6-958P-201ENST00000516995 106 ntBASIC0.73□□□□□ -2.29
PCDHGA1Q9Y5H4 AL117187.1-201ENST00000555482 181 ntBASIC0.73□□□□□ -2.29
PCDHGA1Q9Y5H4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.73□□□□□ -2.29
PCDHGA1Q9Y5H4 AL365265.1-201ENST00000621045 234 ntBASIC0.73□□□□□ -2.29
PCDHGA1Q9Y5H4 SNORD45.3-201ENST00000363836 72 ntBASIC0.72□□□□□ -2.29
PCDHGA1Q9Y5H4 Y_RNA.634-201ENST00000364811 113 ntBASIC0.72□□□□□ -2.29
PCDHGA1Q9Y5H4 Y_RNA.304-201ENST00000365011 112 ntBASIC0.72□□□□□ -2.29
PCDHGA1Q9Y5H4 SNORA27-201ENST00000384323 126 ntBASIC0.72□□□□□ -2.29
PCDHGA1Q9Y5H4 MIR508-201ENST00000384857 115 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 255.3 ms