Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 RNU7-96P-201ENST00000459535 64 ntBASIC0.03□□□□□ -2.4
LRRC42Q9Y546 RNU6-1270P-201ENST00000517128 108 ntBASIC0.03□□□□□ -2.4
LRRC42Q9Y546 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
LRRC42Q9Y546 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.03□□□□□ -2.4
LRRC42Q9Y546 AC112693.2-201ENST00000556538 232 ntBASIC0.03□□□□□ -2.4
LRRC42Q9Y546 AC007485.1-201ENST00000616755 206 ntBASIC0.03□□□□□ -2.4
LRRC42Q9Y546 MIR8066-201ENST00000617280 78 ntBASIC0.03□□□□□ -2.4
LRRC42Q9Y546 RNU4-90P-201ENST00000362773 141 ntBASIC0.02□□□□□ -2.41
LRRC42Q9Y546 SNORA42.1-201ENST00000363515 137 ntBASIC0.02□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.445-201ENST00000384168 102 ntBASIC0.02□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.476-201ENST00000384347 108 ntBASIC0.02□□□□□ -2.41
LRRC42Q9Y546 SNORD115-46-201ENST00000390982 71 ntBASIC0.02□□□□□ -2.41
LRRC42Q9Y546 RNU2-11P-201ENST00000459191 187 ntBASIC0.02□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.631-201ENST00000459607 101 ntBASIC0.02□□□□□ -2.41
LRRC42Q9Y546 RNU6-998P-201ENST00000515894 101 ntBASIC0.02□□□□□ -2.41
LRRC42Q9Y546 RNU6-397P-201ENST00000516226 104 ntBASIC0.02□□□□□ -2.41
LRRC42Q9Y546 SNORA4-201ENST00000584302 138 ntBASIC0.02□□□□□ -2.41
LRRC42Q9Y546 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.02□□□□□ -2.41
LRRC42Q9Y546 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.02□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.116-201ENST00000363292 103 ntBASIC0.01□□□□□ -2.41
LRRC42Q9Y546 SNORA72.1-201ENST00000363485 129 ntBASIC0.01□□□□□ -2.41
LRRC42Q9Y546 RNU6-740P-201ENST00000364734 105 ntBASIC0.01□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.529-201ENST00000384586 119 ntBASIC0.01□□□□□ -2.41
LRRC42Q9Y546 SNORD77.3-201ENST00000391113 65 ntBASIC0.01□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.676-201ENST00000516393 96 ntBASIC0.01□□□□□ -2.41
LRRC42Q9Y546 AC100767.1-201ENST00000528178 123 ntBASIC0.01□□□□□ -2.41
LRRC42Q9Y546 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.01□□□□□ -2.41
LRRC42Q9Y546 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.01□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.66-201ENST00000362862 102 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.112-201ENST00000363250 102 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.154-201ENST00000363624 102 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.183-201ENST00000363882 113 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.293-201ENST00000364908 93 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.303-201ENST00000364998 94 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 MIR518E-201ENST00000385252 88 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 MIR644A-201ENST00000385262 94 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 MIR526A2-201ENST00000390198 65 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.581-201ENST00000391017 97 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 SNORA26.6-201ENST00000391256 115 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 MIR1287-201ENST00000408492 90 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 RNU2-59P-201ENST00000410482 191 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.617-201ENST00000410920 90 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 PMCHL1-202ENST00000423102 261 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 AF228730.3-201ENST00000436691 102 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 RNU6-126P-201ENST00000516685 103 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 RNU6-365P-201ENST00000517113 106 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 AP003327.1-201ENST00000529684 127 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0□□□□□ -2.41
LRRC42Q9Y546 AP001282.2-201ENST00000616149 309 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 AC010487.4-201ENST00000637027 61 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 AC112487.2-201ENST00000637950 304 ntBASIC0□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 RNY3P1-201ENST00000365085 102 ntBASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 RNU6-290P-201ENST00000365212 101 ntBASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 SNORA63.7-201ENST00000365579 123 ntBASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 SNORD93-201ENST00000408813 74 ntBASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 RNU4-83P-201ENST00000410863 133 ntBASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 AL512326.2-201ENST00000426359 151 ntBASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 RNU6-875P-201ENST00000516488 106 ntBASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 AP003733.2-201ENST00000529409 171 ntBASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 AL008718.3-201ENST00000610217 321 ntBASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 MIR6755-201ENST00000619993 66 ntBASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 AC090574.1-201ENST00000623186 233 ntBASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.01□□□□□ -2.41
LRRC42Q9Y546 SNORD114-9-201ENST00000364370 72 ntBASIC-0.02□□□□□ -2.41
LRRC42Q9Y546 RNU4-10P-201ENST00000364383 140 ntBASIC-0.02□□□□□ -2.41
LRRC42Q9Y546 RNU6-662P-201ENST00000384253 104 ntBASIC-0.02□□□□□ -2.41
LRRC42Q9Y546 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.02□□□□□ -2.41
LRRC42Q9Y546 RNU6-469P-201ENST00000516253 101 ntBASIC-0.02□□□□□ -2.41
LRRC42Q9Y546 RNA5SP268-201ENST00000516828 124 ntBASIC-0.02□□□□□ -2.41
LRRC42Q9Y546 RNU6-897P-201ENST00000517135 105 ntBASIC-0.02□□□□□ -2.41
LRRC42Q9Y546 MIR7107-201ENST00000611489 80 ntBASIC-0.02□□□□□ -2.41
LRRC42Q9Y546 uc_338.22-201ENST00000622722 187 ntBASIC-0.02□□□□□ -2.41
LRRC42Q9Y546 MIR6717-201ENST00000622747 73 ntBASIC-0.02□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.03□□□□□ -2.41
LRRC42Q9Y546 RNA5SP214-201ENST00000363378 118 ntBASIC-0.03□□□□□ -2.41
LRRC42Q9Y546 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.03□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.03□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.03□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.03□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.03□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.03□□□□□ -2.41
LRRC42Q9Y546 RNU6-121P-201ENST00000410525 99 ntBASIC-0.03□□□□□ -2.41
LRRC42Q9Y546 RNU2-70P-201ENST00000410718 179 ntBASIC-0.03□□□□□ -2.41
LRRC42Q9Y546 SEPT7P4-201ENST00000437076 306 ntBASIC-0.03□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.03□□□□□ -2.41
LRRC42Q9Y546 RNU6-504P-201ENST00000516568 104 ntBASIC-0.03□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.03□□□□□ -2.41
LRRC42Q9Y546 AL662814.1-201ENST00000617364 121 ntBASIC-0.03□□□□□ -2.41
LRRC42Q9Y546 MIR6515-201ENST00000619843 57 ntBASIC-0.03□□□□□ -2.41
LRRC42Q9Y546 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.04□□□□□ -2.42
LRRC42Q9Y546 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.04□□□□□ -2.42
LRRC42Q9Y546 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.04□□□□□ -2.42
LRRC42Q9Y546 RNU6-597P-201ENST00000365620 102 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms