Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 Y_RNA.537-201ENST00000384626 109 ntBASIC1.38□□□□□ -2.19
PKP3Q9Y446 RNU6-394P-201ENST00000410735 107 ntBASIC1.38□□□□□ -2.19
PKP3Q9Y446 RNU7-41P-201ENST00000515917 61 ntBASIC1.38□□□□□ -2.19
PKP3Q9Y446 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
PKP3Q9Y446 MIR4791-201ENST00000607666 84 ntBASIC1.38□□□□□ -2.19
PKP3Q9Y446 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.38□□□□□ -2.19
PKP3Q9Y446 MIR3658-201ENST00000636291 56 ntBASIC1.38□□□□□ -2.19
PKP3Q9Y446 RNU6-1336P-201ENST00000383886 109 ntBASIC1.37□□□□□ -2.19
PKP3Q9Y446 SNORD116-18-201ENST00000383961 92 ntBASIC1.37□□□□□ -2.19
PKP3Q9Y446 Y_RNA.440-201ENST00000384120 114 ntBASIC1.37□□□□□ -2.19
PKP3Q9Y446 Y_RNA.464-201ENST00000384282 110 ntBASIC1.37□□□□□ -2.19
PKP3Q9Y446 RNU6-804P-201ENST00000384286 107 ntBASIC1.37□□□□□ -2.19
PKP3Q9Y446 MIR548I3-201ENST00000408378 149 ntBASIC1.37□□□□□ -2.19
PKP3Q9Y446 MIR548I1-201ENST00000408810 149 ntBASIC1.37□□□□□ -2.19
PKP3Q9Y446 RNU4-62P-201ENST00000410125 130 ntBASIC1.37□□□□□ -2.19
PKP3Q9Y446 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.37□□□□□ -2.19
PKP3Q9Y446 RPS29P24-201ENST00000486345 171 ntBASIC1.37□□□□□ -2.19
PKP3Q9Y446 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.37□□□□□ -2.19
PKP3Q9Y446 MIR3144-201ENST00000579460 79 ntBASIC1.37□□□□□ -2.19
PKP3Q9Y446 MIR3192-201ENST00000584920 77 ntBASIC1.37□□□□□ -2.19
PKP3Q9Y446 MIR7974-201ENST00000615835 79 ntBASIC1.37□□□□□ -2.19
PKP3Q9Y446 AC243994.1-201ENST00000618627 109 ntBASIC1.37□□□□□ -2.19
PKP3Q9Y446 MIR4251-201ENST00000635819 61 ntBASIC1.37□□□□□ -2.19
PKP3Q9Y446 MIR376A2-201ENST00000636782 80 ntBASIC1.37□□□□□ -2.19
PKP3Q9Y446 AL161722.3-201ENST00000605789 2983 ntBASIC1.37□□□□□ -2.19
PKP3Q9Y446 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.37□□□□□ -2.19
PKP3Q9Y446 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
PKP3Q9Y446 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
PKP3Q9Y446 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
PKP3Q9Y446 Y_RNA.8-201ENST00000362353 102 ntBASIC1.36□□□□□ -2.19
PKP3Q9Y446 RNU6-818P-201ENST00000364837 108 ntBASIC1.36□□□□□ -2.19
PKP3Q9Y446 Y_RNA.494-201ENST00000384432 111 ntBASIC1.36□□□□□ -2.19
PKP3Q9Y446 Y_RNA.580-201ENST00000391004 95 ntBASIC1.36□□□□□ -2.19
PKP3Q9Y446 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.36□□□□□ -2.19
PKP3Q9Y446 AC108667.1-201ENST00000428618 249 ntBASIC1.36□□□□□ -2.19
PKP3Q9Y446 RPS29P29-201ENST00000456396 171 ntBASIC1.36□□□□□ -2.19
PKP3Q9Y446 RNU7-67P-201ENST00000459003 62 ntBASIC1.36□□□□□ -2.19
PKP3Q9Y446 RNU2-13P-201ENST00000515909 113 ntBASIC1.36□□□□□ -2.19
PKP3Q9Y446 MIR8065-201ENST00000620577 100 ntBASIC1.36□□□□□ -2.19
PKP3Q9Y446 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
PKP3Q9Y446 Y_RNA.140-201ENST00000363474 103 ntBASIC1.35□□□□□ -2.19
PKP3Q9Y446 RNU6-1082P-201ENST00000364574 107 ntBASIC1.35□□□□□ -2.19
PKP3Q9Y446 RNU6-1130P-201ENST00000365434 107 ntBASIC1.35□□□□□ -2.19
PKP3Q9Y446 AC009474.2-201ENST00000451383 136 ntBASIC1.35□□□□□ -2.19
PKP3Q9Y446 RNU7-96P-201ENST00000459535 64 ntBASIC1.35□□□□□ -2.19
PKP3Q9Y446 DNAJC19P9-201ENST00000555084 351 ntBASIC1.35□□□□□ -2.19
PKP3Q9Y446 Y_RNA.778-201ENST00000620203 90 ntBASIC1.35□□□□□ -2.19
PKP3Q9Y446 MTND1P7-201ENST00000632801 297 ntBASIC1.35□□□□□ -2.19
PKP3Q9Y446 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
PKP3Q9Y446 RNU6-151P-201ENST00000364158 107 ntBASIC1.34□□□□□ -2.19
PKP3Q9Y446 RNU4-11P-201ENST00000365287 132 ntBASIC1.34□□□□□ -2.19
PKP3Q9Y446 Y_RNA.398-201ENST00000383952 99 ntBASIC1.34□□□□□ -2.19
PKP3Q9Y446 SNORA24-201ENST00000384096 131 ntBASIC1.34□□□□□ -2.19
PKP3Q9Y446 RNU6-588P-201ENST00000410281 105 ntBASIC1.34□□□□□ -2.19
PKP3Q9Y446 RPS29P23-201ENST00000458635 123 ntBASIC1.34□□□□□ -2.19
PKP3Q9Y446 AL133373.1-201ENST00000497098 94 ntBASIC1.34□□□□□ -2.19
PKP3Q9Y446 RNU7-53P-201ENST00000516705 60 ntBASIC1.34□□□□□ -2.19
PKP3Q9Y446 MIR4421-201ENST00000578133 69 ntBASIC1.34□□□□□ -2.19
PKP3Q9Y446 MIR4769-201ENST00000584126 77 ntBASIC1.34□□□□□ -2.19
PKP3Q9Y446 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.34□□□□□ -2.19
PKP3Q9Y446 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.34□□□□□ -2.19
PKP3Q9Y446 Y_RNA.351-201ENST00000365436 96 ntBASIC1.33□□□□□ -2.2
PKP3Q9Y446 MIR758-201ENST00000390227 88 ntBASIC1.33□□□□□ -2.2
PKP3Q9Y446 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.33□□□□□ -2.2
PKP3Q9Y446 AL035398.1-201ENST00000430869 322 ntBASIC1.33□□□□□ -2.2
PKP3Q9Y446 RNU7-95P-201ENST00000459222 64 ntBASIC1.33□□□□□ -2.2
PKP3Q9Y446 RNU7-80P-201ENST00000459562 61 ntBASIC1.33□□□□□ -2.2
PKP3Q9Y446 RNU6-998P-201ENST00000515894 101 ntBASIC1.33□□□□□ -2.2
PKP3Q9Y446 RNU7-70P-201ENST00000516941 66 ntBASIC1.33□□□□□ -2.2
PKP3Q9Y446 RNU6-958P-201ENST00000516995 106 ntBASIC1.33□□□□□ -2.2
PKP3Q9Y446 RNU6-1212P-201ENST00000517023 104 ntBASIC1.33□□□□□ -2.2
PKP3Q9Y446 AP000942.3-201ENST00000603702 160 ntBASIC1.33□□□□□ -2.2
PKP3Q9Y446 AC021753.1-201ENST00000635724 168 ntBASIC1.33□□□□□ -2.2
PKP3Q9Y446 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
PKP3Q9Y446 MIR378A-201ENST00000362177 66 ntBASIC1.32□□□□□ -2.2
PKP3Q9Y446 MIR342-201ENST00000362212 99 ntBASIC1.32□□□□□ -2.2
PKP3Q9Y446 SNORD26-201ENST00000384147 75 ntBASIC1.32□□□□□ -2.2
PKP3Q9Y446 Y_RNA.454-201ENST00000384224 113 ntBASIC1.32□□□□□ -2.2
PKP3Q9Y446 RNU6-1054P-201ENST00000411293 104 ntBASIC1.32□□□□□ -2.2
PKP3Q9Y446 AC245047.7-201ENST00000440265 293 ntBASIC1.32□□□□□ -2.2
PKP3Q9Y446 RNU1-123P-201ENST00000458950 160 ntBASIC1.32□□□□□ -2.2
PKP3Q9Y446 AC048334.1-201ENST00000477975 159 ntBASIC1.32□□□□□ -2.2
PKP3Q9Y446 SNORA31.2-201ENST00000516019 134 ntBASIC1.32□□□□□ -2.2
PKP3Q9Y446 RNU6-1149P-201ENST00000516810 97 ntBASIC1.32□□□□□ -2.2
PKP3Q9Y446 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.32□□□□□ -2.2
PKP3Q9Y446 AC112693.2-201ENST00000556538 232 ntBASIC1.32□□□□□ -2.2
PKP3Q9Y446 AC131055.1-201ENST00000584626 316 ntBASIC1.32□□□□□ -2.2
PKP3Q9Y446 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
PKP3Q9Y446 Y_RNA.52-201ENST00000362760 96 ntBASIC1.31□□□□□ -2.2
PKP3Q9Y446 SNORA25.3-201ENST00000363205 127 ntBASIC1.31□□□□□ -2.2
PKP3Q9Y446 SNORA7.1-201ENST00000363750 139 ntBASIC1.31□□□□□ -2.2
PKP3Q9Y446 snoU13.25-201ENST00000458945 104 ntBASIC1.31□□□□□ -2.2
PKP3Q9Y446 snoU13.16-201ENST00000459350 104 ntBASIC1.31□□□□□ -2.2
PKP3Q9Y446 SNORA31.4-201ENST00000516049 129 ntBASIC1.31□□□□□ -2.2
PKP3Q9Y446 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.31□□□□□ -2.2
PKP3Q9Y446 MTND5P32-201ENST00000560711 1802 ntBASIC1.31□□□□□ -2.2
PKP3Q9Y446 MIR103A2-201ENST00000362154 78 ntBASIC1.3□□□□□ -2.2
PKP3Q9Y446 MIR302B-201ENST00000362188 73 ntBASIC1.3□□□□□ -2.2
PKP3Q9Y446 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
PKP3Q9Y446 Y_RNA.497-201ENST00000384447 98 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms