Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SNORA18.4-201ENST00000516440 124 ntBASIC0.31□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.721-201ENST00000517207 102 ntBASIC0.31□□□□□ -2.36
NPIPA1Q9UND3 MIR4514-201ENST00000581410 57 ntBASIC0.31□□□□□ -2.36
NPIPA1Q9UND3 MIR6740-201ENST00000618268 113 ntBASIC0.31□□□□□ -2.36
NPIPA1Q9UND3 AC092634.7-201ENST00000621022 103 ntBASIC0.31□□□□□ -2.36
NPIPA1Q9UND3 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
NPIPA1Q9UND3 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
NPIPA1Q9UND3 MIR518F-201ENST00000384973 87 ntBASIC0.3□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.587-201ENST00000391210 103 ntBASIC0.3□□□□□ -2.36
NPIPA1Q9UND3 PMCHL1-202ENST00000423102 261 ntBASIC0.3□□□□□ -2.36
NPIPA1Q9UND3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.3□□□□□ -2.36
NPIPA1Q9UND3 HMGN1P33-201ENST00000432945 451 ntBASIC0.3□□□□□ -2.36
NPIPA1Q9UND3 RNU6-693P-201ENST00000516134 107 ntBASIC0.3□□□□□ -2.36
NPIPA1Q9UND3 RNU6-126P-201ENST00000516685 103 ntBASIC0.3□□□□□ -2.36
NPIPA1Q9UND3 RNU2-31P-201ENST00000516954 155 ntBASIC0.3□□□□□ -2.36
NPIPA1Q9UND3 AL109933.3-201ENST00000619095 188 ntBASIC0.3□□□□□ -2.36
NPIPA1Q9UND3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
NPIPA1Q9UND3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.29□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.31-201ENST00000362574 102 ntBASIC0.29□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.105-201ENST00000363182 111 ntBASIC0.29□□□□□ -2.36
NPIPA1Q9UND3 RNU6-1309P-201ENST00000363305 108 ntBASIC0.29□□□□□ -2.36
NPIPA1Q9UND3 RNU6-326P-201ENST00000365480 107 ntBASIC0.29□□□□□ -2.36
NPIPA1Q9UND3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
NPIPA1Q9UND3 SNORD24-201ENST00000383884 75 ntBASIC0.29□□□□□ -2.36
NPIPA1Q9UND3 RNU6-364P-201ENST00000384387 107 ntBASIC0.29□□□□□ -2.36
NPIPA1Q9UND3 MIR588-201ENST00000384900 83 ntBASIC0.29□□□□□ -2.36
NPIPA1Q9UND3 MIR526A2-201ENST00000390198 65 ntBASIC0.29□□□□□ -2.36
NPIPA1Q9UND3 SNORA40.5-201ENST00000391061 128 ntBASIC0.29□□□□□ -2.36
NPIPA1Q9UND3 RNU6-121P-201ENST00000410525 99 ntBASIC0.29□□□□□ -2.36
NPIPA1Q9UND3 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
NPIPA1Q9UND3 RNU7-53P-201ENST00000516705 60 ntBASIC0.29□□□□□ -2.36
NPIPA1Q9UND3 SNORA40.15-201ENST00000516884 107 ntBASIC0.29□□□□□ -2.36
NPIPA1Q9UND3 Z97988.1-201ENST00000637697 135 ntBASIC0.29□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.28-201ENST00000362554 111 ntBASIC0.28□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.37-201ENST00000362606 108 ntBASIC0.28□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.380-201ENST00000365663 111 ntBASIC0.28□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.389-201ENST00000383924 113 ntBASIC0.28□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.394-201ENST00000383942 103 ntBASIC0.28□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.419-201ENST00000384041 102 ntBASIC0.28□□□□□ -2.36
NPIPA1Q9UND3 RNU6-662P-201ENST00000384253 104 ntBASIC0.28□□□□□ -2.36
NPIPA1Q9UND3 SNORA27-201ENST00000384323 126 ntBASIC0.28□□□□□ -2.36
NPIPA1Q9UND3 RNU6-938P-201ENST00000411285 103 ntBASIC0.28□□□□□ -2.36
NPIPA1Q9UND3 RPS29P24-201ENST00000486345 171 ntBASIC0.28□□□□□ -2.36
NPIPA1Q9UND3 MTCO2P24-201ENST00000515611 426 ntBASIC0.28□□□□□ -2.36
NPIPA1Q9UND3 SNORA25.12-201ENST00000516202 82 ntBASIC0.28□□□□□ -2.36
NPIPA1Q9UND3 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
NPIPA1Q9UND3 SNORA62.5-201ENST00000516634 120 ntBASIC0.28□□□□□ -2.36
NPIPA1Q9UND3 MIR8055-201ENST00000610739 97 ntBASIC0.28□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.802-201ENST00000614892 130 ntBASIC0.28□□□□□ -2.36
NPIPA1Q9UND3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.85-201ENST00000363014 111 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.217-201ENST00000364214 105 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 RNU4-10P-201ENST00000364383 140 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.276-201ENST00000364732 109 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.541-201ENST00000384640 113 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 MIR548A2-201ENST00000384956 97 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 RNU6-1319P-201ENST00000390855 104 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 RNU6-747P-201ENST00000390928 104 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 RNU6-241P-201ENST00000391148 104 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 RNU6-447P-201ENST00000410293 104 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 RNU6-1118P-201ENST00000410382 104 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 RNU6-1076P-201ENST00000410397 104 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 RNU6-355P-201ENST00000410427 104 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 RNU6-791P-201ENST00000410467 104 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 RNU6-705P-201ENST00000410601 104 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 RNU6-1100P-201ENST00000410691 104 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 RNU6-860P-201ENST00000410860 104 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 RNU6-1217P-201ENST00000411276 104 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 RNU6-785P-201ENST00000411324 104 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 AL138752.1-201ENST00000452964 351 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 MIR18B-201ENST00000454574 71 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.641-201ENST00000459414 105 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 SNORD36C-201ENST00000516733 66 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 RNU6-1270P-201ENST00000517128 108 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 AC100767.1-201ENST00000528178 123 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 MIR5688-201ENST00000580619 83 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 AC008608.1-201ENST00000603910 127 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 U6.90-201ENST00000614007 104 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 U6.70-201ENST00000620287 104 ntBASIC0.27□□□□□ -2.37
NPIPA1Q9UND3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.26□□□□□ -2.37
NPIPA1Q9UND3 RNU6-888P-201ENST00000363010 101 ntBASIC0.26□□□□□ -2.37
NPIPA1Q9UND3 snoU2_19.2-201ENST00000363024 80 ntBASIC0.26□□□□□ -2.37
NPIPA1Q9UND3 SNORA1.1-201ENST00000364671 133 ntBASIC0.26□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.374-201ENST00000365606 101 ntBASIC0.26□□□□□ -2.37
NPIPA1Q9UND3 RNU6-1165P-201ENST00000410119 107 ntBASIC0.26□□□□□ -2.37
NPIPA1Q9UND3 RNU7-102P-201ENST00000458948 62 ntBASIC0.26□□□□□ -2.37
NPIPA1Q9UND3 RNU7-185P-201ENST00000459215 60 ntBASIC0.26□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.631-201ENST00000459607 101 ntBASIC0.26□□□□□ -2.37
NPIPA1Q9UND3 RNU6-365P-201ENST00000517113 106 ntBASIC0.26□□□□□ -2.37
NPIPA1Q9UND3 RNU6-988P-201ENST00000519081 107 ntBASIC0.26□□□□□ -2.37
NPIPA1Q9UND3 AP003733.2-201ENST00000529409 171 ntBASIC0.26□□□□□ -2.37
NPIPA1Q9UND3 AC006006.1-201ENST00000603082 144 ntBASIC0.26□□□□□ -2.37
NPIPA1Q9UND3 AL008718.3-201ENST00000610217 321 ntBASIC0.26□□□□□ -2.37
NPIPA1Q9UND3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
NPIPA1Q9UND3 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
NPIPA1Q9UND3 Y_RNA.7-201ENST00000362352 102 ntBASIC0.25□□□□□ -2.37
NPIPA1Q9UND3 RNA5SP517-201ENST00000364724 117 ntBASIC0.25□□□□□ -2.37
NPIPA1Q9UND3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms