Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.07□□□□□ -2.4
NUP50Q9UKX7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.07□□□□□ -2.4
NUP50Q9UKX7 MIR30D-201ENST00000362283 70 ntBASIC0.06□□□□□ -2.4
NUP50Q9UKX7 SNORA1.1-201ENST00000364671 133 ntBASIC0.06□□□□□ -2.4
NUP50Q9UKX7 RNA5SP117-201ENST00000365294 118 ntBASIC0.06□□□□□ -2.4
NUP50Q9UKX7 Y_RNA.390-201ENST00000383932 102 ntBASIC0.06□□□□□ -2.4
NUP50Q9UKX7 Y_RNA.486-201ENST00000384398 107 ntBASIC0.06□□□□□ -2.4
NUP50Q9UKX7 RNU6-102P-201ENST00000384485 104 ntBASIC0.06□□□□□ -2.4
NUP50Q9UKX7 Y_RNA.567-201ENST00000384736 106 ntBASIC0.06□□□□□ -2.4
NUP50Q9UKX7 MIR548A2-201ENST00000384956 97 ntBASIC0.06□□□□□ -2.4
NUP50Q9UKX7 RNU6-1190P-201ENST00000410811 104 ntBASIC0.06□□□□□ -2.4
NUP50Q9UKX7 RPS29P24-201ENST00000486345 171 ntBASIC0.06□□□□□ -2.4
NUP50Q9UKX7 RNU6-1046P-201ENST00000516538 107 ntBASIC0.06□□□□□ -2.4
NUP50Q9UKX7 SNORD36C-201ENST00000516733 66 ntBASIC0.06□□□□□ -2.4
NUP50Q9UKX7 RNU6-448P-201ENST00000517052 107 ntBASIC0.06□□□□□ -2.4
NUP50Q9UKX7 AC069113.3-201ENST00000521019 150 ntBASIC0.06□□□□□ -2.4
NUP50Q9UKX7 AC040926.1-201ENST00000530195 238 ntBASIC0.06□□□□□ -2.4
NUP50Q9UKX7 C8orf59P2-201ENST00000603441 271 ntBASIC0.06□□□□□ -2.4
NUP50Q9UKX7 AC013791.1-201ENST00000616619 62 ntBASIC0.06□□□□□ -2.4
NUP50Q9UKX7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.06□□□□□ -2.4
NUP50Q9UKX7 Y_RNA.70-201ENST00000362886 110 ntBASIC0.05□□□□□ -2.4
NUP50Q9UKX7 RNU6-1309P-201ENST00000363305 108 ntBASIC0.05□□□□□ -2.4
NUP50Q9UKX7 SNORA36.1-201ENST00000363424 132 ntBASIC0.05□□□□□ -2.4
NUP50Q9UKX7 MT-TF-201ENST00000387314 71 ntBASIC0.05□□□□□ -2.4
NUP50Q9UKX7 RBMX2P4-201ENST00000441256 376 ntBASIC0.05□□□□□ -2.4
NUP50Q9UKX7 MRPS35P2-201ENST00000508242 191 ntBASIC0.05□□□□□ -2.4
NUP50Q9UKX7 RNU6-976P-201ENST00000516086 111 ntBASIC0.05□□□□□ -2.4
NUP50Q9UKX7 RNU2-31P-201ENST00000516954 155 ntBASIC0.05□□□□□ -2.4
NUP50Q9UKX7 AC133485.4-201ENST00000561835 220 ntBASIC0.05□□□□□ -2.4
NUP50Q9UKX7 MIR5190-201ENST00000581537 80 ntBASIC0.05□□□□□ -2.4
NUP50Q9UKX7 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
NUP50Q9UKX7 MIR4315-1-201ENST00000636800 73 ntBASIC0.05□□□□□ -2.4
NUP50Q9UKX7 MIR4315-2-201ENST00000640925 73 ntBASIC0.05□□□□□ -2.4
NUP50Q9UKX7 Y_RNA.14-201ENST00000362415 103 ntBASIC0.04□□□□□ -2.4
NUP50Q9UKX7 SNORD113-8-201ENST00000363497 74 ntBASIC0.04□□□□□ -2.4
NUP50Q9UKX7 SNORD12C-201ENST00000386307 89 ntBASIC0.04□□□□□ -2.4
NUP50Q9UKX7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.04□□□□□ -2.4
NUP50Q9UKX7 HSPE1P25-201ENST00000455484 251 ntBASIC0.04□□□□□ -2.4
NUP50Q9UKX7 RNU6-693P-201ENST00000516134 107 ntBASIC0.04□□□□□ -2.4
NUP50Q9UKX7 Y_RNA.715-201ENST00000517082 110 ntBASIC0.04□□□□□ -2.4
NUP50Q9UKX7 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.04□□□□□ -2.4
NUP50Q9UKX7 MIR4662B-201ENST00000579498 81 ntBASIC0.04□□□□□ -2.4
NUP50Q9UKX7 UBE2V2P2-201ENST00000587677 504 ntBASIC0.04□□□□□ -2.4
NUP50Q9UKX7 AC124312.5-201ENST00000604451 268 ntBASIC0.04□□□□□ -2.4
NUP50Q9UKX7 RAC1P9-201ENST00000604990 392 ntBASIC0.04□□□□□ -2.4
NUP50Q9UKX7 SNORD24-201ENST00000383884 75 ntBASIC0.03□□□□□ -2.4
NUP50Q9UKX7 Y_RNA.412-201ENST00000384001 104 ntBASIC0.03□□□□□ -2.4
NUP50Q9UKX7 AC112693.2-201ENST00000556538 232 ntBASIC0.03□□□□□ -2.4
NUP50Q9UKX7 MIR367-201ENST00000362299 68 ntBASIC0.02□□□□□ -2.41
NUP50Q9UKX7 Y_RNA.68-201ENST00000362881 102 ntBASIC0.02□□□□□ -2.41
NUP50Q9UKX7 SNORD61-201ENST00000384252 73 ntBASIC0.02□□□□□ -2.41
NUP50Q9UKX7 Y_RNA.505-201ENST00000384489 102 ntBASIC0.02□□□□□ -2.41
NUP50Q9UKX7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
NUP50Q9UKX7 MIR548I3-201ENST00000408378 149 ntBASIC0.02□□□□□ -2.41
NUP50Q9UKX7 Y_RNA.602-201ENST00000410535 92 ntBASIC0.02□□□□□ -2.41
NUP50Q9UKX7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.02□□□□□ -2.41
NUP50Q9UKX7 FGF7P4-201ENST00000509595 295 ntBASIC0.02□□□□□ -2.41
NUP50Q9UKX7 MTCO2P24-201ENST00000515611 426 ntBASIC0.02□□□□□ -2.41
NUP50Q9UKX7 RNU6-475P-201ENST00000516073 104 ntBASIC0.02□□□□□ -2.41
NUP50Q9UKX7 AC131281.1-201ENST00000522984 164 ntBASIC0.02□□□□□ -2.41
NUP50Q9UKX7 MIR5692C2-201ENST00000577959 77 ntBASIC0.02□□□□□ -2.41
NUP50Q9UKX7 MIR4724-201ENST00000579485 89 ntBASIC0.02□□□□□ -2.41
NUP50Q9UKX7 MIR376A1-201ENST00000616574 68 ntBASIC0.02□□□□□ -2.41
NUP50Q9UKX7 MIR8066-201ENST00000617280 78 ntBASIC0.02□□□□□ -2.41
NUP50Q9UKX7 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.02□□□□□ -2.41
NUP50Q9UKX7 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
NUP50Q9UKX7 Y_RNA.42-201ENST00000362660 108 ntBASIC0.01□□□□□ -2.41
NUP50Q9UKX7 RNU6-1272P-201ENST00000362776 107 ntBASIC0.01□□□□□ -2.41
NUP50Q9UKX7 RNU6-888P-201ENST00000363010 101 ntBASIC0.01□□□□□ -2.41
NUP50Q9UKX7 SNORA42.1-201ENST00000363515 137 ntBASIC0.01□□□□□ -2.41
NUP50Q9UKX7 Y_RNA.315-201ENST00000365117 102 ntBASIC0.01□□□□□ -2.41
NUP50Q9UKX7 Y_RNA.424-201ENST00000384063 103 ntBASIC0.01□□□□□ -2.41
NUP50Q9UKX7 AL138752.1-201ENST00000452964 351 ntBASIC0.01□□□□□ -2.41
NUP50Q9UKX7 Y_RNA.639-201ENST00000458981 102 ntBASIC0.01□□□□□ -2.41
NUP50Q9UKX7 RNU7-96P-201ENST00000459535 64 ntBASIC0.01□□□□□ -2.41
NUP50Q9UKX7 RNU6-1270P-201ENST00000517128 108 ntBASIC0.01□□□□□ -2.41
NUP50Q9UKX7 AC006157.1-201ENST00000611750 366 ntBASIC0.01□□□□□ -2.41
NUP50Q9UKX7 AC067863.3-201ENST00000624172 122 ntBASIC0.01□□□□□ -2.41
NUP50Q9UKX7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.01□□□□□ -2.41
NUP50Q9UKX7 SNORA72.1-201ENST00000363485 129 ntBASIC0□□□□□ -2.41
NUP50Q9UKX7 RNU6-740P-201ENST00000364734 105 ntBASIC0□□□□□ -2.41
NUP50Q9UKX7 Y_RNA.569-201ENST00000384749 103 ntBASIC0□□□□□ -2.41
NUP50Q9UKX7 MIR1302-11-201ENST00000408051 138 ntBASIC0□□□□□ -2.41
NUP50Q9UKX7 MIR1302-9-201ENST00000408365 138 ntBASIC0□□□□□ -2.41
NUP50Q9UKX7 MIR1302-10-201ENST00000408734 138 ntBASIC0□□□□□ -2.41
NUP50Q9UKX7 RNU2-59P-201ENST00000410482 191 ntBASIC0□□□□□ -2.41
NUP50Q9UKX7 RNU2-11P-201ENST00000459191 187 ntBASIC0□□□□□ -2.41
NUP50Q9UKX7 RNU6-998P-201ENST00000515894 101 ntBASIC0□□□□□ -2.41
NUP50Q9UKX7 RNU6-397P-201ENST00000516226 104 ntBASIC0□□□□□ -2.41
NUP50Q9UKX7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0□□□□□ -2.41
NUP50Q9UKX7 MIR1302-2-201ENST00000607096 138 ntBASIC0□□□□□ -2.41
NUP50Q9UKX7 AC007485.1-201ENST00000616755 206 ntBASIC0□□□□□ -2.41
NUP50Q9UKX7 RNU4-90P-201ENST00000362773 141 ntBASIC-0.01□□□□□ -2.41
NUP50Q9UKX7 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
NUP50Q9UKX7 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.01□□□□□ -2.41
NUP50Q9UKX7 MIR644A-201ENST00000385262 94 ntBASIC-0.01□□□□□ -2.41
NUP50Q9UKX7 SNORD115-46-201ENST00000390982 71 ntBASIC-0.01□□□□□ -2.41
NUP50Q9UKX7 SNORD77.3-201ENST00000391113 65 ntBASIC-0.01□□□□□ -2.41
NUP50Q9UKX7 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.01□□□□□ -2.41
NUP50Q9UKX7 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms