Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 MIR1302-2-201ENST00000607096 138 ntBASIC0.15□□□□□ -2.39
CTNNA3Q9UI47 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.15□□□□□ -2.39
CTNNA3Q9UI47 U6.90-201ENST00000614007 104 ntBASIC0.15□□□□□ -2.39
CTNNA3Q9UI47 U6.70-201ENST00000620287 104 ntBASIC0.15□□□□□ -2.39
CTNNA3Q9UI47 MIR1302-1-201ENST00000637932 143 ntBASIC0.15□□□□□ -2.39
CTNNA3Q9UI47 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 SNORA72.1-201ENST00000363485 129 ntBASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 Y_RNA.390-201ENST00000383932 102 ntBASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 MT-TF-201ENST00000387314 71 ntBASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 MIR1912-201ENST00000410389 80 ntBASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 RNU6-130P-201ENST00000411112 103 ntBASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 RNU6-938P-201ENST00000411285 103 ntBASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 SNORD71-201ENST00000411292 86 ntBASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 SNRPGP12-201ENST00000449481 213 ntBASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 MTND4LP30-201ENST00000454092 297 ntBASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 Y_RNA.632-201ENST00000459189 102 ntBASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 RNA5SP94-201ENST00000516917 108 ntBASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 RNU2-31P-201ENST00000516954 155 ntBASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 SNORA25.18-201ENST00000607153 114 ntBASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 AC013791.1-201ENST00000616619 62 ntBASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 MIR4315-1-201ENST00000636800 73 ntBASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 MIR4315-2-201ENST00000640925 73 ntBASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 AC010332.2-201ENST00000613083 1904 ntBASIC0.14□□□□□ -2.39
CTNNA3Q9UI47 RNU6-308P-201ENST00000390957 107 ntBASIC0.13□□□□□ -2.39
CTNNA3Q9UI47 RNU6-1165P-201ENST00000410119 107 ntBASIC0.13□□□□□ -2.39
CTNNA3Q9UI47 RNU7-185P-201ENST00000459215 60 ntBASIC0.13□□□□□ -2.39
CTNNA3Q9UI47 SNORA25.12-201ENST00000516202 82 ntBASIC0.13□□□□□ -2.39
CTNNA3Q9UI47 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
CTNNA3Q9UI47 AC040926.1-201ENST00000530195 238 ntBASIC0.13□□□□□ -2.39
CTNNA3Q9UI47 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.13□□□□□ -2.39
CTNNA3Q9UI47 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.13□□□□□ -2.39
CTNNA3Q9UI47 RAC1P9-201ENST00000604990 392 ntBASIC0.13□□□□□ -2.39
CTNNA3Q9UI47 PART1_1.1-201ENST00000611761 217 ntBASIC0.13□□□□□ -2.39
CTNNA3Q9UI47 RNU6-1099P-201ENST00000363533 107 ntBASIC0.12□□□□□ -2.39
CTNNA3Q9UI47 RNU6-923P-201ENST00000364753 107 ntBASIC0.12□□□□□ -2.39
CTNNA3Q9UI47 SNORA27-201ENST00000384323 126 ntBASIC0.12□□□□□ -2.39
CTNNA3Q9UI47 RNU6-763P-201ENST00000390865 106 ntBASIC0.12□□□□□ -2.39
CTNNA3Q9UI47 RNU6-383P-201ENST00000410864 94 ntBASIC0.12□□□□□ -2.39
CTNNA3Q9UI47 RNU7-102P-201ENST00000458948 62 ntBASIC0.12□□□□□ -2.39
CTNNA3Q9UI47 Y_RNA.637-201ENST00000459424 114 ntBASIC0.12□□□□□ -2.39
CTNNA3Q9UI47 RPS29P24-201ENST00000486345 171 ntBASIC0.12□□□□□ -2.39
CTNNA3Q9UI47 Y_RNA.666-201ENST00000516187 112 ntBASIC0.12□□□□□ -2.39
CTNNA3Q9UI47 RNU6-958P-201ENST00000516995 106 ntBASIC0.12□□□□□ -2.39
CTNNA3Q9UI47 MIR4636-201ENST00000582271 80 ntBASIC0.12□□□□□ -2.39
CTNNA3Q9UI47 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.12□□□□□ -2.39
CTNNA3Q9UI47 Y_RNA.14-201ENST00000362415 103 ntBASIC0.11□□□□□ -2.39
CTNNA3Q9UI47 Y_RNA.37-201ENST00000362606 108 ntBASIC0.11□□□□□ -2.39
CTNNA3Q9UI47 RNU6-815P-201ENST00000384080 113 ntBASIC0.11□□□□□ -2.39
CTNNA3Q9UI47 RNU6-364P-201ENST00000384387 107 ntBASIC0.11□□□□□ -2.39
CTNNA3Q9UI47 MIR588-201ENST00000384900 83 ntBASIC0.11□□□□□ -2.39
CTNNA3Q9UI47 MIR526A2-201ENST00000390198 65 ntBASIC0.11□□□□□ -2.39
CTNNA3Q9UI47 SNORD115-46-201ENST00000390982 71 ntBASIC0.11□□□□□ -2.39
CTNNA3Q9UI47 RNU6-1190P-201ENST00000410811 104 ntBASIC0.11□□□□□ -2.39
CTNNA3Q9UI47 RNU6-602P-201ENST00000411155 105 ntBASIC0.11□□□□□ -2.39
CTNNA3Q9UI47 Y_RNA.631-201ENST00000459607 101 ntBASIC0.11□□□□□ -2.39
CTNNA3Q9UI47 Y_RNA.715-201ENST00000517082 110 ntBASIC0.11□□□□□ -2.39
CTNNA3Q9UI47 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.11□□□□□ -2.39
CTNNA3Q9UI47 MIR5589-201ENST00000579442 60 ntBASIC0.11□□□□□ -2.39
CTNNA3Q9UI47 MIR371B-201ENST00000638082 66 ntBASIC0.11□□□□□ -2.39
CTNNA3Q9UI47 RNU4-90P-201ENST00000362773 141 ntBASIC0.1□□□□□ -2.39
CTNNA3Q9UI47 RNU6-888P-201ENST00000363010 101 ntBASIC0.1□□□□□ -2.39
CTNNA3Q9UI47 SNORA36.1-201ENST00000363424 132 ntBASIC0.1□□□□□ -2.39
CTNNA3Q9UI47 Y_RNA.183-201ENST00000363882 113 ntBASIC0.1□□□□□ -2.39
CTNNA3Q9UI47 MIR518F-201ENST00000384973 87 ntBASIC0.1□□□□□ -2.39
CTNNA3Q9UI47 MIR1257-201ENST00000408490 117 ntBASIC0.1□□□□□ -2.39
CTNNA3Q9UI47 MTCO1P5-201ENST00000433573 344 ntBASIC0.1□□□□□ -2.39
CTNNA3Q9UI47 HSPE1P25-201ENST00000455484 251 ntBASIC0.1□□□□□ -2.39
CTNNA3Q9UI47 RNU7-96P-201ENST00000459535 64 ntBASIC0.1□□□□□ -2.39
CTNNA3Q9UI47 MTCO2P24-201ENST00000515611 426 ntBASIC0.1□□□□□ -2.39
CTNNA3Q9UI47 RNU6-448P-201ENST00000517052 107 ntBASIC0.1□□□□□ -2.39
CTNNA3Q9UI47 RNU7-156P-201ENST00000517214 74 ntBASIC0.1□□□□□ -2.39
CTNNA3Q9UI47 AP003733.2-201ENST00000529409 171 ntBASIC0.1□□□□□ -2.39
CTNNA3Q9UI47 MIR5692C2-201ENST00000577959 77 ntBASIC0.1□□□□□ -2.39
CTNNA3Q9UI47 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.1□□□□□ -2.39
CTNNA3Q9UI47 MIR30D-201ENST00000362283 70 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 SNORD113-8-201ENST00000363497 74 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 SNORA42.1-201ENST00000363515 137 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 Y_RNA.197-201ENST00000364004 102 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 SNORA1.1-201ENST00000364671 133 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 Y_RNA.445-201ENST00000384168 102 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 SNORA8.2-201ENST00000384372 139 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 Y_RNA.486-201ENST00000384398 107 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 RNU6-102P-201ENST00000384485 104 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 MIR548A2-201ENST00000384956 97 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 RNU6-848P-201ENST00000515948 107 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 RNU6-617P-201ENST00000516147 107 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 RNU6-473P-201ENST00000516164 107 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 RNU6-1049P-201ENST00000516414 107 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 RNU6-1046P-201ENST00000516538 107 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 AC069113.3-201ENST00000521019 150 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 AC131281.1-201ENST00000522984 164 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 MIR3678-201ENST00000578455 94 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 MIR4724-201ENST00000579485 89 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 AL049861.1-201ENST00000603130 150 ntBASIC0.09□□□□□ -2.4
CTNNA3Q9UI47 RNU6-1309P-201ENST00000363305 108 ntBASIC0.08□□□□□ -2.4
CTNNA3Q9UI47 Y_RNA.263-201ENST00000364659 114 ntBASIC0.08□□□□□ -2.4
CTNNA3Q9UI47 RNA5SP117-201ENST00000365294 118 ntBASIC0.08□□□□□ -2.4
CTNNA3Q9UI47 Y_RNA.410-201ENST00000383992 113 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms