Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SNORD24-201ENST00000383884 75 ntBASIC0.39□□□□□ -2.35
CLCF1Q9UBD9 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
CLCF1Q9UBD9 MIR215-201ENST00000384858 110 ntBASIC0.39□□□□□ -2.35
CLCF1Q9UBD9 MIR520H-201ENST00000385126 88 ntBASIC0.39□□□□□ -2.35
CLCF1Q9UBD9 RNU6-177P-201ENST00000411257 104 ntBASIC0.39□□□□□ -2.35
CLCF1Q9UBD9 AC015818.7-201ENST00000428754 109 ntBASIC0.39□□□□□ -2.35
CLCF1Q9UBD9 AC087499.7-201ENST00000441958 109 ntBASIC0.39□□□□□ -2.35
CLCF1Q9UBD9 AL731563.1-201ENST00000442202 214 ntBASIC0.39□□□□□ -2.35
CLCF1Q9UBD9 RNU6-693P-201ENST00000516134 107 ntBASIC0.39□□□□□ -2.35
CLCF1Q9UBD9 SNORA18.4-201ENST00000516440 124 ntBASIC0.39□□□□□ -2.35
CLCF1Q9UBD9 RNU6-365P-201ENST00000517113 106 ntBASIC0.39□□□□□ -2.35
CLCF1Q9UBD9 AC100767.1-201ENST00000528178 123 ntBASIC0.39□□□□□ -2.35
CLCF1Q9UBD9 snoU18.1-201ENST00000629629 71 ntBASIC0.39□□□□□ -2.35
CLCF1Q9UBD9 MTND4P29-201ENST00000503122 1372 ntBASIC0.39□□□□□ -2.35
CLCF1Q9UBD9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
CLCF1Q9UBD9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
CLCF1Q9UBD9 Y_RNA.36-201ENST00000362602 112 ntBASIC0.38□□□□□ -2.35
CLCF1Q9UBD9 SNORD114-23-201ENST00000363536 72 ntBASIC0.38□□□□□ -2.35
CLCF1Q9UBD9 Y_RNA.210-201ENST00000364161 110 ntBASIC0.38□□□□□ -2.35
CLCF1Q9UBD9 RNU4-45P-201ENST00000365469 141 ntBASIC0.38□□□□□ -2.35
CLCF1Q9UBD9 SNORA27-201ENST00000384323 126 ntBASIC0.38□□□□□ -2.35
CLCF1Q9UBD9 MIR548P-201ENST00000408336 84 ntBASIC0.38□□□□□ -2.35
CLCF1Q9UBD9 RPL21P38-201ENST00000418090 167 ntBASIC0.38□□□□□ -2.35
CLCF1Q9UBD9 AC090844.1-201ENST00000422019 156 ntBASIC0.38□□□□□ -2.35
CLCF1Q9UBD9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.38□□□□□ -2.35
CLCF1Q9UBD9 MIR4804-201ENST00000581683 73 ntBASIC0.38□□□□□ -2.35
CLCF1Q9UBD9 AL008718.3-201ENST00000610217 321 ntBASIC0.38□□□□□ -2.35
CLCF1Q9UBD9 MIR8055-201ENST00000610739 97 ntBASIC0.38□□□□□ -2.35
CLCF1Q9UBD9 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
CLCF1Q9UBD9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CLCF1Q9UBD9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.38□□□□□ -2.35
CLCF1Q9UBD9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 UBE2WP1-201ENST00000362030 340 ntBASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 SNORD18A-201ENST00000363753 72 ntBASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 RNY1P4-201ENST00000384595 115 ntBASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 SNORA8.3-201ENST00000384679 139 ntBASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 MIR518F-201ENST00000384973 87 ntBASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 MIR140-201ENST00000385282 100 ntBASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 SNORA26-201ENST00000391286 122 ntBASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 RNU6-938P-201ENST00000411285 103 ntBASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 RPS29P24-201ENST00000486345 171 ntBASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 RN7SKP12-201ENST00000516275 143 ntBASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 RNU6-504P-201ENST00000516568 104 ntBASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 Y_RNA.711-201ENST00000516993 102 ntBASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 AP003733.2-201ENST00000529409 171 ntBASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 AC113195.1-201ENST00000579952 141 ntBASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 MIR4676-201ENST00000583078 72 ntBASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 Z97988.1-201ENST00000637697 135 ntBASIC0.37□□□□□ -2.35
CLCF1Q9UBD9 RNU6-888P-201ENST00000363010 101 ntBASIC0.36□□□□□ -2.35
CLCF1Q9UBD9 RNU6-806P-201ENST00000365147 105 ntBASIC0.36□□□□□ -2.35
CLCF1Q9UBD9 SNORD61-201ENST00000384252 73 ntBASIC0.36□□□□□ -2.35
CLCF1Q9UBD9 Y_RNA.527-201ENST00000384573 102 ntBASIC0.36□□□□□ -2.35
CLCF1Q9UBD9 RNU6-913P-201ENST00000390913 95 ntBASIC0.36□□□□□ -2.35
CLCF1Q9UBD9 MIR18B-201ENST00000454574 71 ntBASIC0.36□□□□□ -2.35
CLCF1Q9UBD9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.36□□□□□ -2.35
CLCF1Q9UBD9 SERF1AP1-201ENST00000514575 187 ntBASIC0.36□□□□□ -2.35
CLCF1Q9UBD9 Y_RNA.24-201ENST00000362508 103 ntBASIC0.35□□□□□ -2.35
CLCF1Q9UBD9 Y_RNA.64-201ENST00000362845 102 ntBASIC0.35□□□□□ -2.35
CLCF1Q9UBD9 RNU4-10P-201ENST00000364383 140 ntBASIC0.35□□□□□ -2.35
CLCF1Q9UBD9 SNORA1.1-201ENST00000364671 133 ntBASIC0.35□□□□□ -2.35
CLCF1Q9UBD9 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
CLCF1Q9UBD9 Y_RNA.535-201ENST00000384612 99 ntBASIC0.35□□□□□ -2.35
CLCF1Q9UBD9 MIR548A2-201ENST00000384956 97 ntBASIC0.35□□□□□ -2.35
CLCF1Q9UBD9 MIR938-201ENST00000401216 83 ntBASIC0.35□□□□□ -2.35
CLCF1Q9UBD9 RNU2-55P-201ENST00000411146 174 ntBASIC0.35□□□□□ -2.35
CLCF1Q9UBD9 AC113618.1-201ENST00000416747 285 ntBASIC0.35□□□□□ -2.35
CLCF1Q9UBD9 MTCO2P12-201ENST00000427426 682 ntBASIC0.35□□□□□ -2.35
CLCF1Q9UBD9 RNU7-56P-201ENST00000458744 62 ntBASIC0.35□□□□□ -2.35
CLCF1Q9UBD9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.35□□□□□ -2.35
CLCF1Q9UBD9 AC010487.4-201ENST00000637027 61 ntBASIC0.35□□□□□ -2.35
CLCF1Q9UBD9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
CLCF1Q9UBD9 MIR18A-201ENST00000362310 71 ntBASIC0.34□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.16-201ENST00000362421 102 ntBASIC0.34□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.61-201ENST00000362835 102 ntBASIC0.34□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.84-201ENST00000363011 104 ntBASIC0.34□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.229-201ENST00000364347 113 ntBASIC0.34□□□□□ -2.36
CLCF1Q9UBD9 RNU6-211P-201ENST00000384047 107 ntBASIC0.34□□□□□ -2.36
CLCF1Q9UBD9 MIR7-2-201ENST00000384970 110 ntBASIC0.34□□□□□ -2.36
CLCF1Q9UBD9 MIR626-201ENST00000385032 94 ntBASIC0.34□□□□□ -2.36
CLCF1Q9UBD9 RNU7-96P-201ENST00000459535 64 ntBASIC0.34□□□□□ -2.36
CLCF1Q9UBD9 RNU6-1299P-201ENST00000516316 100 ntBASIC0.34□□□□□ -2.36
CLCF1Q9UBD9 SNORD36C-201ENST00000516733 66 ntBASIC0.34□□□□□ -2.36
CLCF1Q9UBD9 RNU6-1270P-201ENST00000517128 108 ntBASIC0.34□□□□□ -2.36
CLCF1Q9UBD9 MIR3612-201ENST00000579753 87 ntBASIC0.34□□□□□ -2.36
CLCF1Q9UBD9 AC020891.4-201ENST00000605745 93 ntBASIC0.34□□□□□ -2.36
CLCF1Q9UBD9 MIR6740-201ENST00000618268 113 ntBASIC0.34□□□□□ -2.36
CLCF1Q9UBD9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.34□□□□□ -2.36
CLCF1Q9UBD9 AC010332.2-201ENST00000613083 1904 ntBASIC0.33□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.26-201ENST00000362539 101 ntBASIC0.33□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.138-201ENST00000363462 102 ntBASIC0.33□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.275-201ENST00000364726 110 ntBASIC0.33□□□□□ -2.36
CLCF1Q9UBD9 RNU5E-4P-201ENST00000364931 120 ntBASIC0.33□□□□□ -2.36
CLCF1Q9UBD9 RNU6-867P-201ENST00000364956 107 ntBASIC0.33□□□□□ -2.36
CLCF1Q9UBD9 Y_RNA.410-201ENST00000383992 113 ntBASIC0.33□□□□□ -2.36
CLCF1Q9UBD9 RNY3P5-201ENST00000384127 102 ntBASIC0.33□□□□□ -2.36
CLCF1Q9UBD9 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
CLCF1Q9UBD9 MIR588-201ENST00000384900 83 ntBASIC0.33□□□□□ -2.36
CLCF1Q9UBD9 SNORD77.3-201ENST00000391113 65 ntBASIC0.33□□□□□ -2.36
CLCF1Q9UBD9 SNORA68.3-201ENST00000515906 83 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms