Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RNA5SP327-201ENST00000362494 101 ntBASIC1.43□□□□□ -2.18
LRFN1Q9P244 RNU6-597P-201ENST00000365620 102 ntBASIC1.43□□□□□ -2.18
LRFN1Q9P244 SNORD116-18-201ENST00000383961 92 ntBASIC1.43□□□□□ -2.18
LRFN1Q9P244 U8.17-201ENST00000391292 132 ntBASIC1.43□□□□□ -2.18
LRFN1Q9P244 AC048334.1-201ENST00000477975 159 ntBASIC1.43□□□□□ -2.18
LRFN1Q9P244 SNORA31.2-201ENST00000516019 134 ntBASIC1.43□□□□□ -2.18
LRFN1Q9P244 SNORA31.4-201ENST00000516049 129 ntBASIC1.43□□□□□ -2.18
LRFN1Q9P244 MIR3192-201ENST00000584920 77 ntBASIC1.43□□□□□ -2.18
LRFN1Q9P244 DNAJC19P2-201ENST00000593340 302 ntBASIC1.43□□□□□ -2.18
LRFN1Q9P244 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.43□□□□□ -2.18
LRFN1Q9P244 RNU6-151P-201ENST00000364158 107 ntBASIC1.42□□□□□ -2.18
LRFN1Q9P244 RNU6-1082P-201ENST00000364574 107 ntBASIC1.42□□□□□ -2.18
LRFN1Q9P244 RNU6-1336P-201ENST00000383886 109 ntBASIC1.42□□□□□ -2.18
LRFN1Q9P244 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.42□□□□□ -2.18
LRFN1Q9P244 AF228730.3-201ENST00000436691 102 ntBASIC1.42□□□□□ -2.18
LRFN1Q9P244 snoU13.25-201ENST00000458945 104 ntBASIC1.42□□□□□ -2.18
LRFN1Q9P244 snoU13.18-201ENST00000459483 104 ntBASIC1.42□□□□□ -2.18
LRFN1Q9P244 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.42□□□□□ -2.18
LRFN1Q9P244 AL133373.1-201ENST00000497098 94 ntBASIC1.42□□□□□ -2.18
LRFN1Q9P244 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.42□□□□□ -2.18
LRFN1Q9P244 MIR3129-201ENST00000581095 76 ntBASIC1.42□□□□□ -2.18
LRFN1Q9P244 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.42□□□□□ -2.18
LRFN1Q9P244 Y_RNA.778-201ENST00000620203 90 ntBASIC1.42□□□□□ -2.18
LRFN1Q9P244 MIR6844-201ENST00000637122 62 ntBASIC1.42□□□□□ -2.18
LRFN1Q9P244 SNORD115-28-201ENST00000363931 81 ntBASIC1.41□□□□□ -2.18
LRFN1Q9P244 SNORA25.7-201ENST00000364375 127 ntBASIC1.41□□□□□ -2.18
LRFN1Q9P244 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.41□□□□□ -2.18
LRFN1Q9P244 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.41□□□□□ -2.18
LRFN1Q9P244 RNU7-200P-201ENST00000516105 62 ntBASIC1.41□□□□□ -2.18
LRFN1Q9P244 RNU1-92P-201ENST00000517017 135 ntBASIC1.41□□□□□ -2.18
LRFN1Q9P244 SNORA31.24-201ENST00000517232 57 ntBASIC1.41□□□□□ -2.18
LRFN1Q9P244 MIR548AR-201ENST00000582191 57 ntBASIC1.41□□□□□ -2.18
LRFN1Q9P244 AL365205.2-201ENST00000594586 68 ntBASIC1.41□□□□□ -2.18
LRFN1Q9P244 AC134878.1-201ENST00000619901 243 ntBASIC1.41□□□□□ -2.18
LRFN1Q9P244 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
LRFN1Q9P244 Y_RNA.37-201ENST00000362606 108 ntBASIC1.4□□□□□ -2.19
LRFN1Q9P244 RNA5SP48-201ENST00000363969 126 ntBASIC1.4□□□□□ -2.19
LRFN1Q9P244 Y_RNA.506-201ENST00000384494 102 ntBASIC1.4□□□□□ -2.19
LRFN1Q9P244 SNORD77.3-201ENST00000391113 65 ntBASIC1.4□□□□□ -2.19
LRFN1Q9P244 MIR1323-201ENST00000408090 73 ntBASIC1.4□□□□□ -2.19
LRFN1Q9P244 RNU6-588P-201ENST00000410281 105 ntBASIC1.4□□□□□ -2.19
LRFN1Q9P244 RNU6-938P-201ENST00000411285 103 ntBASIC1.4□□□□□ -2.19
LRFN1Q9P244 AC107297.1-201ENST00000459991 176 ntBASIC1.4□□□□□ -2.19
LRFN1Q9P244 RNU7-41P-201ENST00000515917 61 ntBASIC1.4□□□□□ -2.19
LRFN1Q9P244 MIR3646-201ENST00000578301 84 ntBASIC1.4□□□□□ -2.19
LRFN1Q9P244 MTND1P7-201ENST00000632801 297 ntBASIC1.4□□□□□ -2.19
LRFN1Q9P244 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
LRFN1Q9P244 RNU6-774P-201ENST00000363238 107 ntBASIC1.39□□□□□ -2.19
LRFN1Q9P244 RNU4-11P-201ENST00000365287 132 ntBASIC1.39□□□□□ -2.19
LRFN1Q9P244 Y_RNA.370-201ENST00000365589 108 ntBASIC1.39□□□□□ -2.19
LRFN1Q9P244 RNU6-1292P-201ENST00000383856 107 ntBASIC1.39□□□□□ -2.19
LRFN1Q9P244 SNORA25-201ENST00000384384 134 ntBASIC1.39□□□□□ -2.19
LRFN1Q9P244 Y_RNA.542-201ENST00000384641 111 ntBASIC1.39□□□□□ -2.19
LRFN1Q9P244 SNORD28B-201ENST00000390993 75 ntBASIC1.39□□□□□ -2.19
LRFN1Q9P244 SNORD37.2-201ENST00000391075 66 ntBASIC1.39□□□□□ -2.19
LRFN1Q9P244 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.39□□□□□ -2.19
LRFN1Q9P244 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.39□□□□□ -2.19
LRFN1Q9P244 AC087499.4-201ENST00000448505 178 ntBASIC1.39□□□□□ -2.19
LRFN1Q9P244 RNU7-181P-201ENST00000517234 74 ntBASIC1.39□□□□□ -2.19
LRFN1Q9P244 AP003716.2-201ENST00000528260 108 ntBASIC1.39□□□□□ -2.19
LRFN1Q9P244 PRELID3BP2-201ENST00000605362 201 ntBASIC1.39□□□□□ -2.19
LRFN1Q9P244 AL022345.2-201ENST00000606307 135 ntBASIC1.39□□□□□ -2.19
LRFN1Q9P244 AC008133.2-201ENST00000624540 351 ntBASIC1.39□□□□□ -2.19
LRFN1Q9P244 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
LRFN1Q9P244 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
LRFN1Q9P244 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
LRFN1Q9P244 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
LRFN1Q9P244 SNORA7.1-201ENST00000363750 139 ntBASIC1.38□□□□□ -2.19
LRFN1Q9P244 RNY1P11-201ENST00000363759 113 ntBASIC1.38□□□□□ -2.19
LRFN1Q9P244 RNU6-392P-201ENST00000364926 101 ntBASIC1.38□□□□□ -2.19
LRFN1Q9P244 Y_RNA.400-201ENST00000383963 111 ntBASIC1.38□□□□□ -2.19
LRFN1Q9P244 SNORA75.5-201ENST00000391291 81 ntBASIC1.38□□□□□ -2.19
LRFN1Q9P244 MIR1304-201ENST00000408243 91 ntBASIC1.38□□□□□ -2.19
LRFN1Q9P244 MIR1276-201ENST00000408707 83 ntBASIC1.38□□□□□ -2.19
LRFN1Q9P244 AC023790.1-201ENST00000482174 347 ntBASIC1.38□□□□□ -2.19
LRFN1Q9P244 RNU6-346P-201ENST00000516288 111 ntBASIC1.38□□□□□ -2.19
LRFN1Q9P244 SNORA18.4-201ENST00000516440 124 ntBASIC1.38□□□□□ -2.19
LRFN1Q9P244 SNORD36C-201ENST00000516733 66 ntBASIC1.38□□□□□ -2.19
LRFN1Q9P244 SNORA70.22-201ENST00000517160 124 ntBASIC1.38□□□□□ -2.19
LRFN1Q9P244 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.38□□□□□ -2.19
LRFN1Q9P244 AC019288.1-201ENST00000557918 224 ntBASIC1.38□□□□□ -2.19
LRFN1Q9P244 AL157834.3-201ENST00000615543 103 ntBASIC1.38□□□□□ -2.19
LRFN1Q9P244 AC027335.2-201ENST00000624030 375 ntBASIC1.38□□□□□ -2.19
LRFN1Q9P244 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.38□□□□□ -2.19
LRFN1Q9P244 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
LRFN1Q9P244 ZNF209P-201ENST00000593450 2304 ntBASIC1.37□□□□□ -2.19
LRFN1Q9P244 Y_RNA.410-201ENST00000383992 113 ntBASIC1.37□□□□□ -2.19
LRFN1Q9P244 RNU6-125P-201ENST00000384505 107 ntBASIC1.37□□□□□ -2.19
LRFN1Q9P244 MIR624-201ENST00000385217 97 ntBASIC1.37□□□□□ -2.19
LRFN1Q9P244 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
LRFN1Q9P244 RNU6-910P-201ENST00000390844 107 ntBASIC1.37□□□□□ -2.19
LRFN1Q9P244 SNORD12-201ENST00000391002 90 ntBASIC1.37□□□□□ -2.19
LRFN1Q9P244 RNA5SP127-201ENST00000411051 133 ntBASIC1.37□□□□□ -2.19
LRFN1Q9P244 AL354695.1-201ENST00000427935 228 ntBASIC1.37□□□□□ -2.19
LRFN1Q9P244 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.37□□□□□ -2.19
LRFN1Q9P244 AP003484.1-201ENST00000530974 250 ntBASIC1.37□□□□□ -2.19
LRFN1Q9P244 AC112693.2-201ENST00000556538 232 ntBASIC1.37□□□□□ -2.19
LRFN1Q9P244 MIR376A2-201ENST00000636782 80 ntBASIC1.37□□□□□ -2.19
LRFN1Q9P244 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
LRFN1Q9P244 Y_RNA.215-201ENST00000364204 112 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 155.3 ms