Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 SNORD36C-201ENST00000516733 66 ntBASIC1.18□□□□□ -2.22
HCN3Q9P1Z3 AC090821.2-201ENST00000523552 176 ntBASIC1.18□□□□□ -2.22
HCN3Q9P1Z3 MIR4308-201ENST00000580634 81 ntBASIC1.18□□□□□ -2.22
HCN3Q9P1Z3 AC091895.1-201ENST00000624494 256 ntBASIC1.18□□□□□ -2.22
HCN3Q9P1Z3 MTND1P7-201ENST00000632801 297 ntBASIC1.18□□□□□ -2.22
HCN3Q9P1Z3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.18□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-34-201ENST00000362441 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-12-201ENST00000362583 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-29-201ENST00000362834 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-9-201ENST00000362912 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-21-201ENST00000362963 81 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 Y_RNA.83-201ENST00000363005 113 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-14-201ENST00000363090 81 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-13-201ENST00000363358 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-41-201ENST00000363608 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-11-201ENST00000363616 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-5-201ENST00000363633 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-39-201ENST00000363694 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-4-201ENST00000363810 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-16-201ENST00000363887 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-6-201ENST00000363942 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 Y_RNA.200-201ENST00000364018 102 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-42-201ENST00000364273 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-15-201ENST00000364809 81 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-1-201ENST00000364961 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-26-201ENST00000365067 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-10-201ENST00000365073 81 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-43-201ENST00000365503 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-36-201ENST00000365629 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 Y_RNA.571-201ENST00000384753 98 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD12-201ENST00000391002 90 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 AF228730.3-201ENST00000436691 102 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 AC002429.1-201ENST00000437672 148 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 RNU7-21P-201ENST00000459430 62 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 RPS26P48-201ENST00000491713 339 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 RNU6-958P-201ENST00000516995 106 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 SNORD115-40-201ENST00000606510 82 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 AC108706.1-201ENST00000611053 297 ntBASIC1.17□□□□□ -2.22
HCN3Q9P1Z3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
HCN3Q9P1Z3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.16□□□□□ -2.22
HCN3Q9P1Z3 SNORD114-26-201ENST00000363543 72 ntBASIC1.16□□□□□ -2.22
HCN3Q9P1Z3 SNORA40.5-201ENST00000391061 128 ntBASIC1.16□□□□□ -2.22
HCN3Q9P1Z3 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
HCN3Q9P1Z3 RNU7-90P-201ENST00000459216 62 ntBASIC1.16□□□□□ -2.22
HCN3Q9P1Z3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.16□□□□□ -2.22
HCN3Q9P1Z3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HCN3Q9P1Z3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.16□□□□□ -2.22
HCN3Q9P1Z3 MIR548AO-201ENST00000579992 96 ntBASIC1.16□□□□□ -2.22
HCN3Q9P1Z3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
HCN3Q9P1Z3 Y_RNA.23-201ENST00000362496 106 ntBASIC1.15□□□□□ -2.23
HCN3Q9P1Z3 Y_RNA.121-201ENST00000363309 113 ntBASIC1.15□□□□□ -2.23
HCN3Q9P1Z3 SNORA70.7-201ENST00000384159 133 ntBASIC1.15□□□□□ -2.23
HCN3Q9P1Z3 SNORA27-201ENST00000384323 126 ntBASIC1.15□□□□□ -2.23
HCN3Q9P1Z3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
HCN3Q9P1Z3 RNU6-938P-201ENST00000411285 103 ntBASIC1.15□□□□□ -2.23
HCN3Q9P1Z3 SNORA18.4-201ENST00000516440 124 ntBASIC1.15□□□□□ -2.23
HCN3Q9P1Z3 AP003716.2-201ENST00000528260 108 ntBASIC1.15□□□□□ -2.23
HCN3Q9P1Z3 AC023827.1-201ENST00000569247 97 ntBASIC1.15□□□□□ -2.23
HCN3Q9P1Z3 AC097639.2-201ENST00000603159 172 ntBASIC1.15□□□□□ -2.23
HCN3Q9P1Z3 SEPT14P17-201ENST00000617978 177 ntBASIC1.15□□□□□ -2.23
HCN3Q9P1Z3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HCN3Q9P1Z3 MIR411-201ENST00000362239 96 ntBASIC1.14□□□□□ -2.23
HCN3Q9P1Z3 SNORA1-201ENST00000384107 130 ntBASIC1.14□□□□□ -2.23
HCN3Q9P1Z3 RNU2-13P-201ENST00000515909 113 ntBASIC1.14□□□□□ -2.23
HCN3Q9P1Z3 MIR3129-201ENST00000581095 76 ntBASIC1.14□□□□□ -2.23
HCN3Q9P1Z3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.13□□□□□ -2.23
HCN3Q9P1Z3 MIR342-201ENST00000362212 99 ntBASIC1.13□□□□□ -2.23
HCN3Q9P1Z3 RNU6-53P-201ENST00000365367 106 ntBASIC1.13□□□□□ -2.23
HCN3Q9P1Z3 RNU6-1189P-201ENST00000383958 107 ntBASIC1.13□□□□□ -2.23
HCN3Q9P1Z3 Y_RNA.515-201ENST00000384535 112 ntBASIC1.13□□□□□ -2.23
HCN3Q9P1Z3 AL138752.1-201ENST00000452964 351 ntBASIC1.13□□□□□ -2.23
HCN3Q9P1Z3 AP000942.4-201ENST00000604811 241 ntBASIC1.13□□□□□ -2.23
HCN3Q9P1Z3 AC022709.1-201ENST00000615967 87 ntBASIC1.13□□□□□ -2.23
HCN3Q9P1Z3 MIR6779-201ENST00000617283 64 ntBASIC1.13□□□□□ -2.23
HCN3Q9P1Z3 MIR6515-201ENST00000619843 57 ntBASIC1.13□□□□□ -2.23
HCN3Q9P1Z3 RNU6-1020P-201ENST00000363684 107 ntBASIC1.12□□□□□ -2.23
HCN3Q9P1Z3 RNU6-379P-201ENST00000363813 104 ntBASIC1.12□□□□□ -2.23
HCN3Q9P1Z3 RNU6-396P-201ENST00000365369 105 ntBASIC1.12□□□□□ -2.23
HCN3Q9P1Z3 Y_RNA.410-201ENST00000383992 113 ntBASIC1.12□□□□□ -2.23
HCN3Q9P1Z3 Y_RNA.476-201ENST00000384347 108 ntBASIC1.12□□□□□ -2.23
HCN3Q9P1Z3 MIR1302-7-201ENST00000408841 72 ntBASIC1.12□□□□□ -2.23
HCN3Q9P1Z3 RNU4-43P-201ENST00000410628 137 ntBASIC1.12□□□□□ -2.23
HCN3Q9P1Z3 RPS29P24-201ENST00000486345 171 ntBASIC1.12□□□□□ -2.23
HCN3Q9P1Z3 RNU11-2P-201ENST00000516898 142 ntBASIC1.12□□□□□ -2.23
HCN3Q9P1Z3 AC130289.1-201ENST00000577321 73 ntBASIC1.12□□□□□ -2.23
HCN3Q9P1Z3 AC009779.6-201ENST00000603972 165 ntBASIC1.12□□□□□ -2.23
HCN3Q9P1Z3 AC078938.1-201ENST00000620993 318 ntBASIC1.12□□□□□ -2.23
HCN3Q9P1Z3 RNA5SP325-201ENST00000363756 130 ntBASIC1.11□□□□□ -2.23
HCN3Q9P1Z3 RNU1-124P-201ENST00000363861 145 ntBASIC1.11□□□□□ -2.23
HCN3Q9P1Z3 RNU6-654P-201ENST00000364373 107 ntBASIC1.11□□□□□ -2.23
HCN3Q9P1Z3 RNU6-47P-201ENST00000383866 107 ntBASIC1.11□□□□□ -2.23
HCN3Q9P1Z3 MIR19B1-201ENST00000384829 87 ntBASIC1.11□□□□□ -2.23
HCN3Q9P1Z3 SNORD77.3-201ENST00000391113 65 ntBASIC1.11□□□□□ -2.23
HCN3Q9P1Z3 AL392103.1-201ENST00000447000 198 ntBASIC1.11□□□□□ -2.23
HCN3Q9P1Z3 snoU13.16-201ENST00000459350 104 ntBASIC1.11□□□□□ -2.23
HCN3Q9P1Z3 SNORD124-201ENST00000459577 104 ntBASIC1.11□□□□□ -2.23
HCN3Q9P1Z3 SNORD116-25-201ENST00000516517 92 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms