Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 Y_RNA.572-201ENST00000384757 98 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 RNU2-55P-201ENST00000411146 174 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 MIR18B-201ENST00000454574 71 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 RNU7-96P-201ENST00000459535 64 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 RN7SKP12-201ENST00000516275 143 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 RNU6-1299P-201ENST00000516316 100 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 SCARNA24.2-201ENST00000516968 130 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 RNU6-1137P-201ENST00000517073 99 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 AL356055.1-201ENST00000602528 446 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 uc_338.6-201ENST00000613544 171 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 MIR6740-201ENST00000618268 113 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 AC010332.2-201ENST00000613083 1904 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 RNU6-797P-201ENST00000363101 109 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.117-201ENST00000363294 101 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 SNORA1.1-201ENST00000364671 133 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 SNORA33.2-201ENST00000365413 134 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 RNY3P5-201ENST00000384127 102 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 MIR548I3-201ENST00000408378 149 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 RNU6-985P-201ENST00000410182 104 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 HMGN1P33-201ENST00000432945 451 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 RPS29P1-201ENST00000465274 159 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 RNU6-570P-201ENST00000517051 105 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 MIR3612-201ENST00000579753 87 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 MIR4714-201ENST00000580728 77 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 AC020891.4-201ENST00000605745 93 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 MIR18A-201ENST00000362310 71 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.44-201ENST00000362676 108 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.91-201ENST00000363042 107 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.191-201ENST00000363972 113 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.634-201ENST00000364811 113 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.410-201ENST00000383992 113 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 RNU6-639P-201ENST00000384074 107 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.432-201ENST00000384087 111 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 MIR588-201ENST00000384900 83 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 MIR1276-201ENST00000408707 83 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 RNU6-1165P-201ENST00000410119 107 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 RNU2-70P-201ENST00000410718 179 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 AC114737.2-201ENST00000421583 173 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 AF228730.3-201ENST00000436691 102 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 MTCYBP6-201ENST00000441810 138 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 SNORD2.1-201ENST00000458762 69 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 RNU6-998P-201ENST00000515894 101 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 RNA5SP153-201ENST00000516498 76 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 AC097639.2-201ENST00000603159 172 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 SNORD18A-201ENST00000363753 72 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 SNORD77.3-201ENST00000391113 65 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 MIR938-201ENST00000401216 83 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 RNU6-602P-201ENST00000411155 105 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 AL138752.1-201ENST00000452964 351 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 RNU7-56P-201ENST00000458744 62 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 RNU2-11P-201ENST00000459191 187 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 snoU13.2-201ENST00000459201 104 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 TRBVB-201ENST00000477100 408 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 MIR4452-201ENST00000583004 71 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 MIR6504-201ENST00000613520 61 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 U2.14-201ENST00000615943 113 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 AP001282.2-201ENST00000616149 309 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 MIR8070-201ENST00000616510 88 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.4-201ENST00000362333 112 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.82-201ENST00000363000 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.92-201ENST00000363043 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.235-201ENST00000364412 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 RNU6-740P-201ENST00000364734 105 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.306-201ENST00000365015 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 SNORA25.9-201ENST00000365087 128 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.312-201ENST00000365089 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.322-201ENST00000365151 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 RNU6-1189P-201ENST00000383958 107 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 RNU6-713P-201ENST00000384761 107 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 MIR563-201ENST00000385080 79 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 MIR1257-201ENST00000408490 117 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 RNU6-1190P-201ENST00000410811 104 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 AC092628.1-201ENST00000436250 252 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.650-201ENST00000459002 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 RNU6-229P-201ENST00000516614 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.701-201ENST00000516812 110 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.777-201ENST00000516982 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.771-201ENST00000598668 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.789-201ENST00000622480 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.7-201ENST00000362352 102 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 RNU6-1309P-201ENST00000363305 108 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.237-201ENST00000364439 102 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.440-201ENST00000384120 114 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 MIR125B2-201ENST00000385128 89 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 MIR616-201ENST00000385293 97 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 MT-TT-201ENST00000387460 66 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.604-201ENST00000410574 102 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.622-201ENST00000411091 108 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 AC098934.3-201ENST00000430450 190 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 RNU7-185P-201ENST00000459215 60 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms