Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 Y_RNA.572-201ENST00000384757 98 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 RNU2-55P-201ENST00000411146 174 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 MIR18B-201ENST00000454574 71 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 RNU7-96P-201ENST00000459535 64 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 RN7SKP12-201ENST00000516275 143 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 RNU6-1299P-201ENST00000516316 100 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 SCARNA24.2-201ENST00000516968 130 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 RNU6-1137P-201ENST00000517073 99 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 AL356055.1-201ENST00000602528 446 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 uc_338.6-201ENST00000613544 171 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 MIR6740-201ENST00000618268 113 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 AC010332.2-201ENST00000613083 1904 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 RNU6-797P-201ENST00000363101 109 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.117-201ENST00000363294 101 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 SNORA1.1-201ENST00000364671 133 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 SNORA33.2-201ENST00000365413 134 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 RNY3P5-201ENST00000384127 102 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 MIR548I3-201ENST00000408378 149 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 RNU6-985P-201ENST00000410182 104 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 HMGN1P33-201ENST00000432945 451 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 RPS29P1-201ENST00000465274 159 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 RNU6-570P-201ENST00000517051 105 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 MIR3612-201ENST00000579753 87 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 MIR4714-201ENST00000580728 77 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 AC020891.4-201ENST00000605745 93 ntBASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.37□□□□□ -2.35
CCL28Q9NRJ3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 MIR18A-201ENST00000362310 71 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.44-201ENST00000362676 108 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.91-201ENST00000363042 107 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.191-201ENST00000363972 113 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.634-201ENST00000364811 113 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.410-201ENST00000383992 113 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 RNU6-639P-201ENST00000384074 107 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.432-201ENST00000384087 111 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 MIR588-201ENST00000384900 83 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 MIR1276-201ENST00000408707 83 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 RNU6-1165P-201ENST00000410119 107 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 RNU2-70P-201ENST00000410718 179 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 AC114737.2-201ENST00000421583 173 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 AF228730.3-201ENST00000436691 102 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 MTCYBP6-201ENST00000441810 138 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 SNORD2.1-201ENST00000458762 69 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 RNU6-998P-201ENST00000515894 101 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 RNA5SP153-201ENST00000516498 76 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 AC097639.2-201ENST00000603159 172 ntBASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
CCL28Q9NRJ3 SNORD18A-201ENST00000363753 72 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 SNORD77.3-201ENST00000391113 65 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 MIR938-201ENST00000401216 83 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 RNU6-602P-201ENST00000411155 105 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 AL138752.1-201ENST00000452964 351 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 RNU7-56P-201ENST00000458744 62 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 RNU2-11P-201ENST00000459191 187 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 snoU13.2-201ENST00000459201 104 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 TRBVB-201ENST00000477100 408 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 MIR4452-201ENST00000583004 71 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 MIR6504-201ENST00000613520 61 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 U2.14-201ENST00000615943 113 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 AP001282.2-201ENST00000616149 309 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 MIR8070-201ENST00000616510 88 ntBASIC0.35□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.4-201ENST00000362333 112 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.82-201ENST00000363000 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.92-201ENST00000363043 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.235-201ENST00000364412 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 RNU6-740P-201ENST00000364734 105 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.306-201ENST00000365015 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 SNORA25.9-201ENST00000365087 128 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.312-201ENST00000365089 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.322-201ENST00000365151 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 RNU6-1189P-201ENST00000383958 107 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 RNU6-713P-201ENST00000384761 107 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 MIR563-201ENST00000385080 79 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 MIR1257-201ENST00000408490 117 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 RNU6-1190P-201ENST00000410811 104 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 AC092628.1-201ENST00000436250 252 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.650-201ENST00000459002 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 RNU6-229P-201ENST00000516614 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.701-201ENST00000516812 110 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.777-201ENST00000516982 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.771-201ENST00000598668 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.789-201ENST00000622480 102 ntBASIC0.34□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.7-201ENST00000362352 102 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 RNU6-1309P-201ENST00000363305 108 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.237-201ENST00000364439 102 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.440-201ENST00000384120 114 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 MIR125B2-201ENST00000385128 89 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 MIR616-201ENST00000385293 97 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 MT-TT-201ENST00000387460 66 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.604-201ENST00000410574 102 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 Y_RNA.622-201ENST00000411091 108 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 AC098934.3-201ENST00000430450 190 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 RNU7-185P-201ENST00000459215 60 ntBASIC0.33□□□□□ -2.36
CCL28Q9NRJ3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 319.5 ms