Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 SNRPGP8-201ENST00000454064 226 ntBASIC0.59□□□□□ -2.31
EXOSC3Q9NQT5 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.59□□□□□ -2.31
EXOSC3Q9NQT5 Y_RNA.679-201ENST00000516416 91 ntBASIC0.59□□□□□ -2.31
EXOSC3Q9NQT5 RNU6-504P-201ENST00000516568 104 ntBASIC0.59□□□□□ -2.31
EXOSC3Q9NQT5 AL442663.2-201ENST00000554385 511 ntBASIC0.59□□□□□ -2.31
EXOSC3Q9NQT5 AC011195.1-201ENST00000578177 177 ntBASIC0.59□□□□□ -2.31
EXOSC3Q9NQT5 AC242498.1-201ENST00000604134 111 ntBASIC0.59□□□□□ -2.31
EXOSC3Q9NQT5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 RNU6-369P-201ENST00000362515 102 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.82-201ENST00000363000 102 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.92-201ENST00000363043 102 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.235-201ENST00000364412 102 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.306-201ENST00000365015 102 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.312-201ENST00000365089 102 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.322-201ENST00000365151 102 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 RNU6-580P-201ENST00000365159 107 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 SNORD114-22-201ENST00000365423 72 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.574-201ENST00000384766 95 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 MIR606-201ENST00000384851 96 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 MIR520E-201ENST00000384867 87 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 SNORD105-201ENST00000386910 85 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 AL606845.1-201ENST00000404881 255 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.650-201ENST00000459002 102 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 RPS29P24-201ENST00000486345 171 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.777-201ENST00000516982 102 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 MIR4264-201ENST00000583520 66 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.771-201ENST00000598668 102 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 uc_338.6-201ENST00000613544 171 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 AL365265.1-201ENST00000621045 234 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.789-201ENST00000622480 102 ntBASIC0.58□□□□□ -2.32
EXOSC3Q9NQT5 MIR335-201ENST00000362173 94 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.122-201ENST00000363331 96 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 SNORA63-201ENST00000363450 132 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.199-201ENST00000364014 102 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 SNORA63C-201ENST00000364578 129 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 RNU6-934P-201ENST00000365154 107 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.396-201ENST00000383949 103 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.416-201ENST00000384014 113 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.432-201ENST00000384087 111 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 RNU6-472P-201ENST00000384299 107 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 MIR508-201ENST00000384857 115 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 MIR548F4-201ENST00000408515 105 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 RNU7-73P-201ENST00000458743 63 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 RNU7-62P-201ENST00000458856 62 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 RNU6-126P-201ENST00000516685 103 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 AC133485.1-201ENST00000567176 124 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 AC138907.6-201ENST00000568401 126 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 MIR4771-2-201ENST00000577758 74 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 MIR4771-1-201ENST00000582617 74 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 AC008737.2-201ENST00000599446 118 ntBASIC0.57□□□□□ -2.32
EXOSC3Q9NQT5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.56□□□□□ -2.32
EXOSC3Q9NQT5 MIR342-201ENST00000362212 99 ntBASIC0.56□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.7-201ENST00000362352 102 ntBASIC0.56□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.54-201ENST00000362766 105 ntBASIC0.56□□□□□ -2.32
EXOSC3Q9NQT5 RNU1-119P-201ENST00000391122 165 ntBASIC0.56□□□□□ -2.32
EXOSC3Q9NQT5 SNORA26-201ENST00000391286 122 ntBASIC0.56□□□□□ -2.32
EXOSC3Q9NQT5 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.56□□□□□ -2.32
EXOSC3Q9NQT5 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
EXOSC3Q9NQT5 RNU6-1190P-201ENST00000410811 104 ntBASIC0.56□□□□□ -2.32
EXOSC3Q9NQT5 AC244098.3-201ENST00000424803 96 ntBASIC0.56□□□□□ -2.32
EXOSC3Q9NQT5 COX6CP6-201ENST00000490840 228 ntBASIC0.56□□□□□ -2.32
EXOSC3Q9NQT5 MIR4643-201ENST00000577473 78 ntBASIC0.56□□□□□ -2.32
EXOSC3Q9NQT5 U6.104-201ENST00000637979 90 ntBASIC0.56□□□□□ -2.32
EXOSC3Q9NQT5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.56□□□□□ -2.32
EXOSC3Q9NQT5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
EXOSC3Q9NQT5 RNU6-1309P-201ENST00000363305 108 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.191-201ENST00000363972 113 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.304-201ENST00000365011 112 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 SNORA1-201ENST00000384107 130 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 RNU6-110P-201ENST00000384508 104 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 SNORD38B-201ENST00000384690 67 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 MIR520F-201ENST00000384824 87 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 MIR616-201ENST00000385293 97 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 RNA5SP222-201ENST00000411039 105 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 RNU2-55P-201ENST00000411146 174 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 RNU2-11P-201ENST00000459191 187 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 RNU6-561P-201ENST00000516222 102 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 RNU7-53P-201ENST00000516705 60 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 AC004812.1-201ENST00000540773 146 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 MIR8055-201ENST00000610739 97 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.812-201ENST00000610788 101 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.784-201ENST00000613803 101 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.787-201ENST00000616522 101 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 RMST_2.1-201ENST00000617263 136 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.780-201ENST00000617336 101 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 MIR6740-201ENST00000618268 113 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.801-201ENST00000619005 101 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 SNORD38B-202ENST00000625943 69 ntBASIC0.55□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.23-201ENST00000362496 106 ntBASIC0.54□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.176-201ENST00000363815 109 ntBASIC0.54□□□□□ -2.32
EXOSC3Q9NQT5 Y_RNA.277-201ENST00000364754 102 ntBASIC0.54□□□□□ -2.32
EXOSC3Q9NQT5 SNORA25.9-201ENST00000365087 128 ntBASIC0.54□□□□□ -2.32
EXOSC3Q9NQT5 RNU6-1189P-201ENST00000383958 107 ntBASIC0.54□□□□□ -2.32
EXOSC3Q9NQT5 RNY3P5-201ENST00000384127 102 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms