Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
HINT3Q9NQE9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.2□□□□□ -2.22
HINT3Q9NQE9 SNORA7.1-201ENST00000363750 139 ntBASIC1.19□□□□□ -2.22
HINT3Q9NQE9 RNU6-1189P-201ENST00000383958 107 ntBASIC1.19□□□□□ -2.22
HINT3Q9NQE9 RNU6-910P-201ENST00000390844 107 ntBASIC1.19□□□□□ -2.22
HINT3Q9NQE9 MIR4421-201ENST00000578133 69 ntBASIC1.19□□□□□ -2.22
HINT3Q9NQE9 AL365205.2-201ENST00000594586 68 ntBASIC1.19□□□□□ -2.22
HINT3Q9NQE9 MTND1P7-201ENST00000632801 297 ntBASIC1.19□□□□□ -2.22
HINT3Q9NQE9 MIR26B-201ENST00000362251 77 ntBASIC1.18□□□□□ -2.22
HINT3Q9NQE9 RNA5SP264-201ENST00000363115 107 ntBASIC1.18□□□□□ -2.22
HINT3Q9NQE9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.18□□□□□ -2.22
HINT3Q9NQE9 SNORA27-201ENST00000384323 126 ntBASIC1.18□□□□□ -2.22
HINT3Q9NQE9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.18□□□□□ -2.22
HINT3Q9NQE9 SEPT7P4-201ENST00000437076 306 ntBASIC1.18□□□□□ -2.22
HINT3Q9NQE9 SNORA70.22-201ENST00000517160 124 ntBASIC1.18□□□□□ -2.22
HINT3Q9NQE9 RNU6-794P-201ENST00000517261 64 ntBASIC1.18□□□□□ -2.22
HINT3Q9NQE9 MIR4498-201ENST00000577599 66 ntBASIC1.18□□□□□ -2.22
HINT3Q9NQE9 AL022345.2-201ENST00000606307 135 ntBASIC1.18□□□□□ -2.22
HINT3Q9NQE9 AC004792.1-201ENST00000614523 137 ntBASIC1.18□□□□□ -2.22
HINT3Q9NQE9 MIR103A2-201ENST00000362154 78 ntBASIC1.17□□□□□ -2.22
HINT3Q9NQE9 RNU6-682P-201ENST00000363843 106 ntBASIC1.17□□□□□ -2.22
HINT3Q9NQE9 Y_RNA.240-201ENST00000364469 95 ntBASIC1.17□□□□□ -2.22
HINT3Q9NQE9 RNU6-1292P-201ENST00000383856 107 ntBASIC1.17□□□□□ -2.22
HINT3Q9NQE9 SNORA24-201ENST00000384096 131 ntBASIC1.17□□□□□ -2.22
HINT3Q9NQE9 SNORA25-201ENST00000384384 134 ntBASIC1.17□□□□□ -2.22
HINT3Q9NQE9 MIR150-201ENST00000385048 84 ntBASIC1.17□□□□□ -2.22
HINT3Q9NQE9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.17□□□□□ -2.22
HINT3Q9NQE9 RNU1-123P-201ENST00000458950 160 ntBASIC1.17□□□□□ -2.22
HINT3Q9NQE9 RNU7-67P-201ENST00000459003 62 ntBASIC1.17□□□□□ -2.22
HINT3Q9NQE9 RNU6-861P-201ENST00000516745 106 ntBASIC1.17□□□□□ -2.22
HINT3Q9NQE9 AC019288.1-201ENST00000557918 224 ntBASIC1.17□□□□□ -2.22
HINT3Q9NQE9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.16□□□□□ -2.22
HINT3Q9NQE9 Y_RNA.440-201ENST00000384120 114 ntBASIC1.16□□□□□ -2.22
HINT3Q9NQE9 SNORA70.7-201ENST00000384159 133 ntBASIC1.16□□□□□ -2.22
HINT3Q9NQE9 Y_RNA.521-201ENST00000384560 114 ntBASIC1.16□□□□□ -2.22
HINT3Q9NQE9 MIR1185-1-201ENST00000408598 86 ntBASIC1.16□□□□□ -2.22
HINT3Q9NQE9 RPS29P24-201ENST00000486345 171 ntBASIC1.16□□□□□ -2.22
HINT3Q9NQE9 AC107027.2-201ENST00000512197 115 ntBASIC1.16□□□□□ -2.22
HINT3Q9NQE9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.16□□□□□ -2.22
HINT3Q9NQE9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.16□□□□□ -2.22
HINT3Q9NQE9 MIR376A2-201ENST00000636782 80 ntBASIC1.16□□□□□ -2.22
HINT3Q9NQE9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HINT3Q9NQE9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
HINT3Q9NQE9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HINT3Q9NQE9 SNORA80D-201ENST00000384488 135 ntBASIC1.15□□□□□ -2.23
HINT3Q9NQE9 MIR1302-7-201ENST00000408841 72 ntBASIC1.15□□□□□ -2.23
HINT3Q9NQE9 AC108059.2-201ENST00000434626 151 ntBASIC1.15□□□□□ -2.23
HINT3Q9NQE9 AC004223.1-201ENST00000479840 271 ntBASIC1.15□□□□□ -2.23
HINT3Q9NQE9 SNORD79.1-201ENST00000516069 84 ntBASIC1.15□□□□□ -2.23
HINT3Q9NQE9 RNU6-182P-201ENST00000516970 105 ntBASIC1.15□□□□□ -2.23
HINT3Q9NQE9 RNU6-958P-201ENST00000516995 106 ntBASIC1.15□□□□□ -2.23
HINT3Q9NQE9 MIR548AO-201ENST00000579992 96 ntBASIC1.15□□□□□ -2.23
HINT3Q9NQE9 MIR5197-201ENST00000583721 112 ntBASIC1.15□□□□□ -2.23
HINT3Q9NQE9 AL157834.3-201ENST00000615543 103 ntBASIC1.15□□□□□ -2.23
HINT3Q9NQE9 SNORA25.7-201ENST00000364375 127 ntBASIC1.14□□□□□ -2.23
HINT3Q9NQE9 Y_RNA.357-201ENST00000365487 109 ntBASIC1.14□□□□□ -2.23
HINT3Q9NQE9 RNU6-597P-201ENST00000365620 102 ntBASIC1.14□□□□□ -2.23
HINT3Q9NQE9 MIR222-201ENST00000384992 110 ntBASIC1.14□□□□□ -2.23
HINT3Q9NQE9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
HINT3Q9NQE9 SNORA75.2-201ENST00000391138 150 ntBASIC1.14□□□□□ -2.23
HINT3Q9NQE9 SNORA75.3-201ENST00000391231 150 ntBASIC1.14□□□□□ -2.23
HINT3Q9NQE9 RNA5SP127-201ENST00000411051 133 ntBASIC1.14□□□□□ -2.23
HINT3Q9NQE9 RNU5E-9P-201ENST00000411164 104 ntBASIC1.14□□□□□ -2.23
HINT3Q9NQE9 AL392103.1-201ENST00000447000 198 ntBASIC1.14□□□□□ -2.23
HINT3Q9NQE9 snoU13.16-201ENST00000459350 104 ntBASIC1.14□□□□□ -2.23
HINT3Q9NQE9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.14□□□□□ -2.23
HINT3Q9NQE9 AC005840.1-201ENST00000498412 377 ntBASIC1.14□□□□□ -2.23
HINT3Q9NQE9 RNU6-1053P-201ENST00000515930 101 ntBASIC1.14□□□□□ -2.23
HINT3Q9NQE9 Y_RNA.662-201ENST00000516028 97 ntBASIC1.14□□□□□ -2.23
HINT3Q9NQE9 AL353770.2-201ENST00000620024 78 ntBASIC1.14□□□□□ -2.23
HINT3Q9NQE9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
HINT3Q9NQE9 Y_RNA.337-201ENST00000365312 102 ntBASIC1.13□□□□□ -2.23
HINT3Q9NQE9 Y_RNA.393-201ENST00000383936 102 ntBASIC1.13□□□□□ -2.23
HINT3Q9NQE9 RNU6-768P-201ENST00000384683 107 ntBASIC1.13□□□□□ -2.23
HINT3Q9NQE9 MIR624-201ENST00000385217 97 ntBASIC1.13□□□□□ -2.23
HINT3Q9NQE9 SNORD12-201ENST00000391002 90 ntBASIC1.13□□□□□ -2.23
HINT3Q9NQE9 AL591704.2-201ENST00000421658 181 ntBASIC1.13□□□□□ -2.23
HINT3Q9NQE9 RNU7-96P-201ENST00000459535 64 ntBASIC1.13□□□□□ -2.23
HINT3Q9NQE9 RNU6-998P-201ENST00000515894 101 ntBASIC1.13□□□□□ -2.23
HINT3Q9NQE9 RNU7-53P-201ENST00000516705 60 ntBASIC1.13□□□□□ -2.23
HINT3Q9NQE9 RNU11-2P-201ENST00000516898 142 ntBASIC1.13□□□□□ -2.23
HINT3Q9NQE9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.13□□□□□ -2.23
HINT3Q9NQE9 AC027335.2-201ENST00000624030 375 ntBASIC1.13□□□□□ -2.23
HINT3Q9NQE9 RNU4-84P-201ENST00000364200 139 ntBASIC1.12□□□□□ -2.23
HINT3Q9NQE9 SNORA25.8-201ENST00000364831 128 ntBASIC1.12□□□□□ -2.23
HINT3Q9NQE9 RNU6-239P-201ENST00000390990 99 ntBASIC1.12□□□□□ -2.23
HINT3Q9NQE9 AL035398.1-201ENST00000430869 322 ntBASIC1.12□□□□□ -2.23
HINT3Q9NQE9 RNU7-73P-201ENST00000458743 63 ntBASIC1.12□□□□□ -2.23
HINT3Q9NQE9 RNU7-21P-201ENST00000459430 62 ntBASIC1.12□□□□□ -2.23
HINT3Q9NQE9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.12□□□□□ -2.23
HINT3Q9NQE9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.12□□□□□ -2.23
HINT3Q9NQE9 AL359821.1-201ENST00000605519 182 ntBASIC1.12□□□□□ -2.23
HINT3Q9NQE9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.12□□□□□ -2.23
HINT3Q9NQE9 Y_RNA.351-201ENST00000365436 96 ntBASIC1.11□□□□□ -2.23
HINT3Q9NQE9 RNU6-1336P-201ENST00000383886 109 ntBASIC1.11□□□□□ -2.23
HINT3Q9NQE9 Y_RNA.441-201ENST00000384123 112 ntBASIC1.11□□□□□ -2.23
HINT3Q9NQE9 RNU6-913P-201ENST00000390913 95 ntBASIC1.11□□□□□ -2.23
HINT3Q9NQE9 SNORA40.6-201ENST00000391153 128 ntBASIC1.11□□□□□ -2.23
HINT3Q9NQE9 AC074198.2-201ENST00000508153 258 ntBASIC1.11□□□□□ -2.23
HINT3Q9NQE9 MIR3660-201ENST00000584845 100 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms