Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 RNU1-93P-201ENST00000364704 169 ntBASIC1.46□□□□□ -2.18
HIPK3Q9H422 RNU6-597P-201ENST00000365620 102 ntBASIC1.46□□□□□ -2.18
HIPK3Q9H422 Y_RNA.393-201ENST00000383936 102 ntBASIC1.46□□□□□ -2.18
HIPK3Q9H422 Y_RNA.464-201ENST00000384282 110 ntBASIC1.46□□□□□ -2.18
HIPK3Q9H422 RNU6-1065P-201ENST00000384513 106 ntBASIC1.46□□□□□ -2.18
HIPK3Q9H422 RNU6-938P-201ENST00000411285 103 ntBASIC1.46□□□□□ -2.18
HIPK3Q9H422 AC087499.4-201ENST00000448505 178 ntBASIC1.46□□□□□ -2.18
HIPK3Q9H422 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.46□□□□□ -2.18
HIPK3Q9H422 RNU7-181P-201ENST00000517234 74 ntBASIC1.46□□□□□ -2.18
HIPK3Q9H422 MIR3129-201ENST00000581095 76 ntBASIC1.46□□□□□ -2.18
HIPK3Q9H422 AL365205.2-201ENST00000594586 68 ntBASIC1.46□□□□□ -2.18
HIPK3Q9H422 AP001485.1-201ENST00000604799 199 ntBASIC1.46□□□□□ -2.18
HIPK3Q9H422 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.46□□□□□ -2.18
HIPK3Q9H422 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
HIPK3Q9H422 RNU6-804P-201ENST00000384286 107 ntBASIC1.45□□□□□ -2.18
HIPK3Q9H422 Y_RNA.542-201ENST00000384641 111 ntBASIC1.45□□□□□ -2.18
HIPK3Q9H422 Y_RNA.580-201ENST00000391004 95 ntBASIC1.45□□□□□ -2.18
HIPK3Q9H422 SNORD77.3-201ENST00000391113 65 ntBASIC1.45□□□□□ -2.18
HIPK3Q9H422 SNORA40.6-201ENST00000391153 128 ntBASIC1.45□□□□□ -2.18
HIPK3Q9H422 MIR3144-201ENST00000579460 79 ntBASIC1.45□□□□□ -2.18
HIPK3Q9H422 MIR548AR-201ENST00000582191 57 ntBASIC1.45□□□□□ -2.18
HIPK3Q9H422 GHRLOS.1-201ENST00000610995 70 ntBASIC1.45□□□□□ -2.18
HIPK3Q9H422 AC022709.1-201ENST00000615967 87 ntBASIC1.45□□□□□ -2.18
HIPK3Q9H422 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HIPK3Q9H422 SNORD114-27-201ENST00000363766 70 ntBASIC1.44□□□□□ -2.18
HIPK3Q9H422 SNORA25.7-201ENST00000364375 127 ntBASIC1.44□□□□□ -2.18
HIPK3Q9H422 RNU6-1292P-201ENST00000383856 107 ntBASIC1.44□□□□□ -2.18
HIPK3Q9H422 Y_RNA.410-201ENST00000383992 113 ntBASIC1.44□□□□□ -2.18
HIPK3Q9H422 SNORD28B-201ENST00000390993 75 ntBASIC1.44□□□□□ -2.18
HIPK3Q9H422 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
HIPK3Q9H422 RPS27P16-201ENST00000425758 201 ntBASIC1.44□□□□□ -2.18
HIPK3Q9H422 SNORD36C-201ENST00000516733 66 ntBASIC1.44□□□□□ -2.18
HIPK3Q9H422 DNAJC19P2-201ENST00000593340 302 ntBASIC1.44□□□□□ -2.18
HIPK3Q9H422 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HIPK3Q9H422 Y_RNA.8-201ENST00000362353 102 ntBASIC1.43□□□□□ -2.18
HIPK3Q9H422 SNORA1.2-201ENST00000365189 134 ntBASIC1.43□□□□□ -2.18
HIPK3Q9H422 RNU6-1130P-201ENST00000365434 107 ntBASIC1.43□□□□□ -2.18
HIPK3Q9H422 RNU7-43P-201ENST00000516554 64 ntBASIC1.43□□□□□ -2.18
HIPK3Q9H422 RNU6-1212P-201ENST00000517023 104 ntBASIC1.43□□□□□ -2.18
HIPK3Q9H422 RNU6-902P-201ENST00000517212 91 ntBASIC1.43□□□□□ -2.18
HIPK3Q9H422 AP003484.1-201ENST00000530974 250 ntBASIC1.43□□□□□ -2.18
HIPK3Q9H422 MIR3646-201ENST00000578301 84 ntBASIC1.43□□□□□ -2.18
HIPK3Q9H422 MIR3664-201ENST00000579074 99 ntBASIC1.43□□□□□ -2.18
HIPK3Q9H422 MIR4764-201ENST00000580680 88 ntBASIC1.43□□□□□ -2.18
HIPK3Q9H422 AL357312.1-201ENST00000603879 298 ntBASIC1.43□□□□□ -2.18
HIPK3Q9H422 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.43□□□□□ -2.18
HIPK3Q9H422 AC021753.1-201ENST00000635724 168 ntBASIC1.43□□□□□ -2.18
HIPK3Q9H422 MIR3658-201ENST00000636291 56 ntBASIC1.43□□□□□ -2.18
HIPK3Q9H422 MIR6844-201ENST00000637122 62 ntBASIC1.43□□□□□ -2.18
HIPK3Q9H422 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HIPK3Q9H422 RNU6-1082P-201ENST00000364574 107 ntBASIC1.42□□□□□ -2.18
HIPK3Q9H422 Y_RNA.370-201ENST00000365589 108 ntBASIC1.42□□□□□ -2.18
HIPK3Q9H422 RNU6-1336P-201ENST00000383886 109 ntBASIC1.42□□□□□ -2.18
HIPK3Q9H422 MIR520E-201ENST00000384867 87 ntBASIC1.42□□□□□ -2.18
HIPK3Q9H422 MIR520C-201ENST00000385005 87 ntBASIC1.42□□□□□ -2.18
HIPK3Q9H422 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.42□□□□□ -2.18
HIPK3Q9H422 RPL30P7-201ENST00000479312 323 ntBASIC1.42□□□□□ -2.18
HIPK3Q9H422 AL512310.8-201ENST00000550183 120 ntBASIC1.42□□□□□ -2.18
HIPK3Q9H422 MIR6515-201ENST00000619843 57 ntBASIC1.42□□□□□ -2.18
HIPK3Q9H422 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.42□□□□□ -2.18
HIPK3Q9H422 SNORD115-34-201ENST00000362441 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-12-201ENST00000362583 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-29-201ENST00000362834 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-9-201ENST00000362912 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-21-201ENST00000362963 81 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-14-201ENST00000363090 81 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-13-201ENST00000363358 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-41-201ENST00000363608 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-11-201ENST00000363616 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-5-201ENST00000363633 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-39-201ENST00000363694 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-4-201ENST00000363810 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-16-201ENST00000363887 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-6-201ENST00000363942 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-42-201ENST00000364273 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 Y_RNA.241-201ENST00000364470 117 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-15-201ENST00000364809 81 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-1-201ENST00000364961 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-26-201ENST00000365067 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-10-201ENST00000365073 81 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-43-201ENST00000365503 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-36-201ENST00000365629 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 RNU6-449P-201ENST00000383914 107 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 Y_RNA.398-201ENST00000383952 99 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 RNU6-1189P-201ENST00000383958 107 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD116-18-201ENST00000383961 92 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 Y_RNA.494-201ENST00000384432 111 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 MIR150-201ENST00000385048 84 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 MIR624-201ENST00000385217 97 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORA40.5-201ENST00000391061 128 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 RNA5SP127-201ENST00000411051 133 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.41□□□□□ -2.18
HIPK3Q9H422 RPS29P1-201ENST00000465274 159 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 RPS26P48-201ENST00000491713 339 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORA18.4-201ENST00000516440 124 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.41□□□□□ -2.18
HIPK3Q9H422 SNORD115-40-201ENST00000606510 82 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
HIPK3Q9H422 MIR376A2-201ENST00000636782 80 ntBASIC1.41□□□□□ -2.18
HIPK3Q9H422 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms