Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 RNU7-164P-201ENST00000459221 62 ntBASIC2.31□□□□□ -2.04
SEMA4AQ9H3S1 RNU7-123P-201ENST00000515911 60 ntBASIC2.31□□□□□ -2.04
SEMA4AQ9H3S1 RNA5SP481-201ENST00000516814 122 ntBASIC2.31□□□□□ -2.04
SEMA4AQ9H3S1 AC068339.1-201ENST00000526965 141 ntBASIC2.31□□□□□ -2.04
SEMA4AQ9H3S1 MIR8054-201ENST00000620877 86 ntBASIC2.31□□□□□ -2.04
SEMA4AQ9H3S1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.31□□□□□ -2.04
SEMA4AQ9H3S1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SEMA4AQ9H3S1 Y_RNA.49-201ENST00000362714 112 ntBASIC2.3□□□□□ -2.04
SEMA4AQ9H3S1 SNORD115-28-201ENST00000363931 81 ntBASIC2.3□□□□□ -2.04
SEMA4AQ9H3S1 RNU6-268P-201ENST00000364174 107 ntBASIC2.3□□□□□ -2.04
SEMA4AQ9H3S1 Y_RNA.265-201ENST00000364677 108 ntBASIC2.3□□□□□ -2.04
SEMA4AQ9H3S1 Y_RNA.298-201ENST00000364960 107 ntBASIC2.3□□□□□ -2.04
SEMA4AQ9H3S1 Y_RNA.323-201ENST00000365157 109 ntBASIC2.3□□□□□ -2.04
SEMA4AQ9H3S1 RNA5SP501-201ENST00000410990 112 ntBASIC2.3□□□□□ -2.04
SEMA4AQ9H3S1 RNU6-592P-201ENST00000411333 103 ntBASIC2.3□□□□□ -2.04
SEMA4AQ9H3S1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.3□□□□□ -2.04
SEMA4AQ9H3S1 RNU6-970P-201ENST00000516312 107 ntBASIC2.3□□□□□ -2.04
SEMA4AQ9H3S1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.3□□□□□ -2.04
SEMA4AQ9H3S1 AC134878.1-201ENST00000619901 243 ntBASIC2.3□□□□□ -2.04
SEMA4AQ9H3S1 AC015726.2-201ENST00000620112 122 ntBASIC2.3□□□□□ -2.04
SEMA4AQ9H3S1 AP000553.5-201ENST00000641933 54 ntBASIC2.3□□□□□ -2.04
SEMA4AQ9H3S1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SEMA4AQ9H3S1 SNORD14E-201ENST00000364009 85 ntBASIC2.29□□□□□ -2.04
SEMA4AQ9H3S1 MIR17-201ENST00000385012 84 ntBASIC2.29□□□□□ -2.04
SEMA4AQ9H3S1 RNA5SP109-201ENST00000391010 116 ntBASIC2.29□□□□□ -2.04
SEMA4AQ9H3S1 RNA5SP450-201ENST00000411206 102 ntBASIC2.29□□□□□ -2.04
SEMA4AQ9H3S1 RNA5SP233-201ENST00000459153 113 ntBASIC2.29□□□□□ -2.04
SEMA4AQ9H3S1 RPS26P48-201ENST00000491713 339 ntBASIC2.29□□□□□ -2.04
SEMA4AQ9H3S1 RNVU1-2-201ENST00000516326 135 ntBASIC2.29□□□□□ -2.04
SEMA4AQ9H3S1 RNU2-35P-201ENST00000516446 142 ntBASIC2.29□□□□□ -2.04
SEMA4AQ9H3S1 SNORD45.4-201ENST00000516629 73 ntBASIC2.29□□□□□ -2.04
SEMA4AQ9H3S1 RNU7-193P-201ENST00000516723 65 ntBASIC2.29□□□□□ -2.04
SEMA4AQ9H3S1 SNORA18.7-201ENST00000516910 131 ntBASIC2.29□□□□□ -2.04
SEMA4AQ9H3S1 MIR5002-201ENST00000584713 97 ntBASIC2.29□□□□□ -2.04
SEMA4AQ9H3S1 RNU6-94P-201ENST00000607728 107 ntBASIC2.29□□□□□ -2.04
SEMA4AQ9H3S1 RNY4P6-201ENST00000363667 96 ntBASIC2.28□□□□□ -2.04
SEMA4AQ9H3S1 Y_RNA.213-201ENST00000364178 111 ntBASIC2.28□□□□□ -2.04
SEMA4AQ9H3S1 RNU1-133P-201ENST00000364867 167 ntBASIC2.28□□□□□ -2.04
SEMA4AQ9H3S1 Y_RNA.351-201ENST00000365436 96 ntBASIC2.28□□□□□ -2.04
SEMA4AQ9H3S1 Y_RNA.558-201ENST00000384685 113 ntBASIC2.28□□□□□ -2.04
SEMA4AQ9H3S1 AC019129.1-201ENST00000403786 261 ntBASIC2.28□□□□□ -2.04
SEMA4AQ9H3S1 AL034345.1-201ENST00000407768 123 ntBASIC2.28□□□□□ -2.04
SEMA4AQ9H3S1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.28□□□□□ -2.04
SEMA4AQ9H3S1 AL445646.1-201ENST00000431784 216 ntBASIC2.28□□□□□ -2.04
SEMA4AQ9H3S1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.28□□□□□ -2.04
SEMA4AQ9H3S1 RNU7-70P-201ENST00000516941 66 ntBASIC2.28□□□□□ -2.04
SEMA4AQ9H3S1 RNU2-19P-201ENST00000517288 84 ntBASIC2.28□□□□□ -2.04
SEMA4AQ9H3S1 MIR1245B-201ENST00000636115 69 ntBASIC2.28□□□□□ -2.04
SEMA4AQ9H3S1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SEMA4AQ9H3S1 MIR494-201ENST00000349529 81 ntBASIC2.27□□□□□ -2.05
SEMA4AQ9H3S1 SNORA25.9-201ENST00000365087 128 ntBASIC2.27□□□□□ -2.05
SEMA4AQ9H3S1 RNU6-442P-201ENST00000383968 104 ntBASIC2.27□□□□□ -2.05
SEMA4AQ9H3S1 Y_RNA.440-201ENST00000384120 114 ntBASIC2.27□□□□□ -2.05
SEMA4AQ9H3S1 RNY1P6-201ENST00000384193 109 ntBASIC2.27□□□□□ -2.05
SEMA4AQ9H3S1 RNU2-7P-201ENST00000410794 178 ntBASIC2.27□□□□□ -2.05
SEMA4AQ9H3S1 SNRPGP14-201ENST00000435400 219 ntBASIC2.27□□□□□ -2.05
SEMA4AQ9H3S1 RNA5SP57-201ENST00000459463 123 ntBASIC2.27□□□□□ -2.05
SEMA4AQ9H3S1 RNA5SP182-201ENST00000516064 82 ntBASIC2.27□□□□□ -2.05
SEMA4AQ9H3S1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.27□□□□□ -2.05
SEMA4AQ9H3S1 AL442128.1-201ENST00000615151 90 ntBASIC2.27□□□□□ -2.05
SEMA4AQ9H3S1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SEMA4AQ9H3S1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SEMA4AQ9H3S1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SEMA4AQ9H3S1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.27□□□□□ -2.05
SEMA4AQ9H3S1 AL359851.1-201ENST00000569460 4997 ntBASIC2.26□□□□□ -2.05
SEMA4AQ9H3S1 RNU6-112P-201ENST00000363599 104 ntBASIC2.26□□□□□ -2.05
SEMA4AQ9H3S1 snoU2-30.1-201ENST00000365012 70 ntBASIC2.26□□□□□ -2.05
SEMA4AQ9H3S1 Y_RNA.494-201ENST00000384432 111 ntBASIC2.26□□□□□ -2.05
SEMA4AQ9H3S1 Y_RNA.544-201ENST00000384650 113 ntBASIC2.26□□□□□ -2.05
SEMA4AQ9H3S1 MIR548D2-201ENST00000384955 97 ntBASIC2.26□□□□□ -2.05
SEMA4AQ9H3S1 MIR759-201ENST00000390224 91 ntBASIC2.26□□□□□ -2.05
SEMA4AQ9H3S1 RNU6-321P-201ENST00000410912 106 ntBASIC2.26□□□□□ -2.05
SEMA4AQ9H3S1 AC108667.1-201ENST00000428618 249 ntBASIC2.26□□□□□ -2.05
SEMA4AQ9H3S1 snoU13.18-201ENST00000459483 104 ntBASIC2.26□□□□□ -2.05
SEMA4AQ9H3S1 RNU7-6P-201ENST00000516845 62 ntBASIC2.26□□□□□ -2.05
SEMA4AQ9H3S1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.26□□□□□ -2.05
SEMA4AQ9H3S1 AP003484.1-201ENST00000530974 250 ntBASIC2.26□□□□□ -2.05
SEMA4AQ9H3S1 AC006441.5-201ENST00000612680 209 ntBASIC2.26□□□□□ -2.05
SEMA4AQ9H3S1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SEMA4AQ9H3S1 MIR6132-201ENST00000622083 109 ntBASIC2.26□□□□□ -2.05
SEMA4AQ9H3S1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.26□□□□□ -2.05
SEMA4AQ9H3S1 MIR378A-201ENST00000362177 66 ntBASIC2.25□□□□□ -2.05
SEMA4AQ9H3S1 Y_RNA.336-201ENST00000365307 109 ntBASIC2.25□□□□□ -2.05
SEMA4AQ9H3S1 Y_RNA.410-201ENST00000383992 113 ntBASIC2.25□□□□□ -2.05
SEMA4AQ9H3S1 RNU6-1113P-201ENST00000384348 107 ntBASIC2.25□□□□□ -2.05
SEMA4AQ9H3S1 SNORA67.3-201ENST00000384366 140 ntBASIC2.25□□□□□ -2.05
SEMA4AQ9H3S1 MIR583-201ENST00000384846 75 ntBASIC2.25□□□□□ -2.05
SEMA4AQ9H3S1 RNA5SP338-201ENST00000410495 85 ntBASIC2.25□□□□□ -2.05
SEMA4AQ9H3S1 RPL39P25-201ENST00000449384 154 ntBASIC2.25□□□□□ -2.05
SEMA4AQ9H3S1 RNU7-45P-201ENST00000459460 63 ntBASIC2.25□□□□□ -2.05
SEMA4AQ9H3S1 SNORA31.4-201ENST00000516049 129 ntBASIC2.25□□□□□ -2.05
SEMA4AQ9H3S1 MIR4305-201ENST00000583252 102 ntBASIC2.25□□□□□ -2.05
SEMA4AQ9H3S1 MIR4448-201ENST00000584360 86 ntBASIC2.25□□□□□ -2.05
SEMA4AQ9H3S1 AC091932.4-201ENST00000623386 200 ntBASIC2.25□□□□□ -2.05
SEMA4AQ9H3S1 AC027279.3-201ENST00000625055 122 ntBASIC2.25□□□□□ -2.05
SEMA4AQ9H3S1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.24□□□□□ -2.05
SEMA4AQ9H3S1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
SEMA4AQ9H3S1 RNU6-296P-201ENST00000384608 107 ntBASIC2.24□□□□□ -2.05
SEMA4AQ9H3S1 MIR489-201ENST00000384923 84 ntBASIC2.24□□□□□ -2.05
SEMA4AQ9H3S1 MTATP8P2-201ENST00000435212 202 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms