Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.95□□□□□ -2.56
TRIM4Q9C037 SNORA72.6-201ENST00000384520 129 ntBASIC-0.95□□□□□ -2.56
TRIM4Q9C037 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.95□□□□□ -2.56
TRIM4Q9C037 RNU6-710P-201ENST00000410424 105 ntBASIC-0.95□□□□□ -2.56
TRIM4Q9C037 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.95□□□□□ -2.56
TRIM4Q9C037 RPL7P42-201ENST00000481005 679 ntBASIC-0.95□□□□□ -2.56
TRIM4Q9C037 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.95□□□□□ -2.56
TRIM4Q9C037 RNU7-115P-201ENST00000516433 55 ntBASIC-0.95□□□□□ -2.56
TRIM4Q9C037 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.95□□□□□ -2.56
TRIM4Q9C037 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.96□□□□□ -2.56
TRIM4Q9C037 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.96□□□□□ -2.56
TRIM4Q9C037 SNORA75-201ENST00000384158 137 ntBASIC-0.96□□□□□ -2.56
TRIM4Q9C037 SNORA40.5-201ENST00000391061 128 ntBASIC-0.96□□□□□ -2.56
TRIM4Q9C037 SNORD5.1-201ENST00000458800 75 ntBASIC-0.96□□□□□ -2.56
TRIM4Q9C037 SNORD11-201ENST00000459124 84 ntBASIC-0.96□□□□□ -2.56
TRIM4Q9C037 RN7SKP298-201ENST00000515950 94 ntBASIC-0.96□□□□□ -2.56
TRIM4Q9C037 RNA5SP470-201ENST00000516463 106 ntBASIC-0.96□□□□□ -2.56
TRIM4Q9C037 RNU1-54P-201ENST00000517181 120 ntBASIC-0.96□□□□□ -2.56
TRIM4Q9C037 MIR3115-201ENST00000577915 68 ntBASIC-0.96□□□□□ -2.56
TRIM4Q9C037 AC087752.4-201ENST00000605911 462 ntBASIC-0.96□□□□□ -2.56
TRIM4Q9C037 RNU6-86P-201ENST00000606534 107 ntBASIC-0.96□□□□□ -2.56
TRIM4Q9C037 AL662814.1-201ENST00000617364 121 ntBASIC-0.96□□□□□ -2.56
TRIM4Q9C037 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.97□□□□□ -2.56
TRIM4Q9C037 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.97□□□□□ -2.56
TRIM4Q9C037 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.97□□□□□ -2.56
TRIM4Q9C037 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.97□□□□□ -2.56
TRIM4Q9C037 RNU6-926P-201ENST00000384075 107 ntBASIC-0.97□□□□□ -2.56
TRIM4Q9C037 SNORA27-201ENST00000384323 126 ntBASIC-0.97□□□□□ -2.56
TRIM4Q9C037 RPS29P24-201ENST00000486345 171 ntBASIC-0.97□□□□□ -2.56
TRIM4Q9C037 AC040926.1-201ENST00000530195 238 ntBASIC-0.97□□□□□ -2.56
TRIM4Q9C037 MIR3942-201ENST00000585264 109 ntBASIC-0.97□□□□□ -2.56
TRIM4Q9C037 MIR548AY-201ENST00000617669 107 ntBASIC-0.97□□□□□ -2.56
TRIM4Q9C037 AL603755.1-201ENST00000619504 163 ntBASIC-0.97□□□□□ -2.56
TRIM4Q9C037 AL596211.1-201ENST00000569873 2277 ntBASIC-0.98□□□□□ -2.57
TRIM4Q9C037 RNU4-36P-201ENST00000364294 144 ntBASIC-0.98□□□□□ -2.57
TRIM4Q9C037 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.98□□□□□ -2.57
TRIM4Q9C037 RNU6-24P-201ENST00000384440 107 ntBASIC-0.98□□□□□ -2.57
TRIM4Q9C037 AL590004.1-201ENST00000405321 300 ntBASIC-0.98□□□□□ -2.57
TRIM4Q9C037 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.98□□□□□ -2.57
TRIM4Q9C037 MTND3P7-201ENST00000474435 343 ntBASIC-0.98□□□□□ -2.57
TRIM4Q9C037 RNU6-470P-201ENST00000515954 104 ntBASIC-0.98□□□□□ -2.57
TRIM4Q9C037 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.98□□□□□ -2.57
TRIM4Q9C037 RNU4-50P-201ENST00000364361 141 ntBASIC-0.99□□□□□ -2.57
TRIM4Q9C037 RNU6-455P-201ENST00000384681 107 ntBASIC-0.99□□□□□ -2.57
TRIM4Q9C037 RNA5SP237-201ENST00000410414 113 ntBASIC-0.99□□□□□ -2.57
TRIM4Q9C037 RNU6-938P-201ENST00000411285 103 ntBASIC-0.99□□□□□ -2.57
TRIM4Q9C037 AC096949.1-201ENST00000412047 152 ntBASIC-0.99□□□□□ -2.57
TRIM4Q9C037 MTND1P14-201ENST00000427400 950 ntBASIC-0.99□□□□□ -2.57
TRIM4Q9C037 AC108059.2-201ENST00000434626 151 ntBASIC-0.99□□□□□ -2.57
TRIM4Q9C037 SEPT14P3-201ENST00000439401 183 ntBASIC-0.99□□□□□ -2.57
TRIM4Q9C037 AL732372.2-207ENST00000445840 183 ntBASIC-0.99□□□□□ -2.57
TRIM4Q9C037 SEPT14P2-201ENST00000453405 183 ntBASIC-0.99□□□□□ -2.57
TRIM4Q9C037 SEPT14P4-201ENST00000513445 186 ntBASIC-0.99□□□□□ -2.57
TRIM4Q9C037 SNORD38.3-201ENST00000516599 73 ntBASIC-0.99□□□□□ -2.57
TRIM4Q9C037 FO082796.1-201ENST00000523795 183 ntBASIC-0.99□□□□□ -2.57
TRIM4Q9C037 AC140658.3-201ENST00000567603 271 ntBASIC-0.99□□□□□ -2.57
TRIM4Q9C037 AC024933.1-201ENST00000608472 348 ntBASIC-0.99□□□□□ -2.57
TRIM4Q9C037 Y_RNA.49-201ENST00000362714 112 ntBASIC-1□□□□□ -2.57
TRIM4Q9C037 Y_RNA.72-201ENST00000362894 103 ntBASIC-1□□□□□ -2.57
TRIM4Q9C037 RNA5SP245-201ENST00000364239 121 ntBASIC-1□□□□□ -2.57
TRIM4Q9C037 RNU4-16P-201ENST00000364737 141 ntBASIC-1□□□□□ -2.57
TRIM4Q9C037 MIR516B1-201ENST00000385211 90 ntBASIC-1□□□□□ -2.57
TRIM4Q9C037 MIR548I3-201ENST00000408378 149 ntBASIC-1□□□□□ -2.57
TRIM4Q9C037 RNU6-1133P-201ENST00000410963 100 ntBASIC-1□□□□□ -2.57
TRIM4Q9C037 AF228730.4-201ENST00000421457 183 ntBASIC-1□□□□□ -2.57
TRIM4Q9C037 RNU6-273P-201ENST00000516937 96 ntBASIC-1□□□□□ -2.57
TRIM4Q9C037 DISC2.1-201ENST00000612827 205 ntBASIC-1□□□□□ -2.57
TRIM4Q9C037 MIR6128-201ENST00000615528 109 ntBASIC-1□□□□□ -2.57
TRIM4Q9C037 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.01□□□□□ -2.57
TRIM4Q9C037 SNORD115-28-201ENST00000363931 81 ntBASIC-1.01□□□□□ -2.57
TRIM4Q9C037 RNU6-20P-201ENST00000384106 107 ntBASIC-1.01□□□□□ -2.57
TRIM4Q9C037 RPL30P15-201ENST00000457129 321 ntBASIC-1.01□□□□□ -2.57
TRIM4Q9C037 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.01□□□□□ -2.57
TRIM4Q9C037 MIR2355-201ENST00000517199 87 ntBASIC-1.01□□□□□ -2.57
TRIM4Q9C037 MIR3165-201ENST00000579874 75 ntBASIC-1.01□□□□□ -2.57
TRIM4Q9C037 AL080274.1-201ENST00000605565 220 ntBASIC-1.01□□□□□ -2.57
TRIM4Q9C037 SNORD116-9-201ENST00000384000 95 ntBASIC-1.02□□□□□ -2.57
TRIM4Q9C037 SNORD116-3-201ENST00000384287 95 ntBASIC-1.02□□□□□ -2.57
TRIM4Q9C037 SNORD116-8-201ENST00000384365 95 ntBASIC-1.02□□□□□ -2.57
TRIM4Q9C037 SNORD116-7-201ENST00000384404 95 ntBASIC-1.02□□□□□ -2.57
TRIM4Q9C037 SNORD116-5-201ENST00000384462 95 ntBASIC-1.02□□□□□ -2.57
TRIM4Q9C037 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.02□□□□□ -2.57
TRIM4Q9C037 RNU6-721P-201ENST00000410155 105 ntBASIC-1.02□□□□□ -2.57
TRIM4Q9C037 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.02□□□□□ -2.57
TRIM4Q9C037 MTATP6P17-201ENST00000431030 672 ntBASIC-1.02□□□□□ -2.57
TRIM4Q9C037 MTND2P22-201ENST00000444325 1033 ntBASIC-1.02□□□□□ -2.57
TRIM4Q9C037 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.02□□□□□ -2.57
TRIM4Q9C037 AC124312.5-201ENST00000604451 268 ntBASIC-1.02□□□□□ -2.57
TRIM4Q9C037 AC005014.3-201ENST00000605985 190 ntBASIC-1.02□□□□□ -2.57
TRIM4Q9C037 RNU6-626P-201ENST00000363354 107 ntBASIC-1.03□□□□□ -2.57
TRIM4Q9C037 SNORD77.3-201ENST00000391113 65 ntBASIC-1.03□□□□□ -2.57
TRIM4Q9C037 AC006210.1-201ENST00000424882 111 ntBASIC-1.03□□□□□ -2.57
TRIM4Q9C037 AC098826.2-201ENST00000452011 651 ntBASIC-1.03□□□□□ -2.57
TRIM4Q9C037 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.03□□□□□ -2.57
TRIM4Q9C037 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.03□□□□□ -2.57
TRIM4Q9C037 SNORA25.16-201ENST00000516741 121 ntBASIC-1.03□□□□□ -2.57
TRIM4Q9C037 AL050303.3-201ENST00000613704 284 ntBASIC-1.03□□□□□ -2.57
TRIM4Q9C037 MIR6863-201ENST00000636112 90 ntBASIC-1.03□□□□□ -2.57
TRIM4Q9C037 SNORA63.5-201ENST00000363548 123 ntBASIC-1.04□□□□□ -2.58
TRIM4Q9C037 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.04□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms