Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.14□□□□□ -2.23
PCGF1Q9BSM1 AC022559.1-201ENST00000520905 205 ntBASIC1.14□□□□□ -2.23
PCGF1Q9BSM1 MRPS18CP4-201ENST00000535821 231 ntBASIC1.14□□□□□ -2.23
PCGF1Q9BSM1 MIR378D2-201ENST00000580636 98 ntBASIC1.14□□□□□ -2.23
PCGF1Q9BSM1 AL359821.1-201ENST00000605519 182 ntBASIC1.14□□□□□ -2.23
PCGF1Q9BSM1 MTND1P7-201ENST00000632801 297 ntBASIC1.14□□□□□ -2.23
PCGF1Q9BSM1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.14□□□□□ -2.23
PCGF1Q9BSM1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.13□□□□□ -2.23
PCGF1Q9BSM1 MIR337-201ENST00000362281 93 ntBASIC1.13□□□□□ -2.23
PCGF1Q9BSM1 Y_RNA.233-201ENST00000364407 101 ntBASIC1.13□□□□□ -2.23
PCGF1Q9BSM1 RNU6-200P-201ENST00000364743 107 ntBASIC1.13□□□□□ -2.23
PCGF1Q9BSM1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.13□□□□□ -2.23
PCGF1Q9BSM1 Y_RNA.410-201ENST00000383992 113 ntBASIC1.13□□□□□ -2.23
PCGF1Q9BSM1 SNORA80D-201ENST00000384488 135 ntBASIC1.13□□□□□ -2.23
PCGF1Q9BSM1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
PCGF1Q9BSM1 RPS29P29-201ENST00000456396 171 ntBASIC1.13□□□□□ -2.23
PCGF1Q9BSM1 Y_RNA.644-201ENST00000459006 113 ntBASIC1.13□□□□□ -2.23
PCGF1Q9BSM1 AC005840.1-201ENST00000498412 377 ntBASIC1.13□□□□□ -2.23
PCGF1Q9BSM1 Y_RNA.674-201ENST00000516362 113 ntBASIC1.13□□□□□ -2.23
PCGF1Q9BSM1 MIR548AO-201ENST00000579992 96 ntBASIC1.13□□□□□ -2.23
PCGF1Q9BSM1 MIR3129-201ENST00000581095 76 ntBASIC1.13□□□□□ -2.23
PCGF1Q9BSM1 MIR376A2-201ENST00000636782 80 ntBASIC1.13□□□□□ -2.23
PCGF1Q9BSM1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.13□□□□□ -2.23
PCGF1Q9BSM1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 Y_RNA.4-201ENST00000362333 112 ntBASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 Y_RNA.257-201ENST00000364596 102 ntBASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 SNORA25.8-201ENST00000364831 128 ntBASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 SNORA27-201ENST00000384323 126 ntBASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 Y_RNA.542-201ENST00000384641 111 ntBASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 MIR758-201ENST00000390227 88 ntBASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 SNORD12-201ENST00000391002 90 ntBASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 RNU6-321P-201ENST00000410912 106 ntBASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 RNU7-21P-201ENST00000459430 62 ntBASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 RNU6-1219P-201ENST00000516143 112 ntBASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 SNORD116-25-201ENST00000516517 92 ntBASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 RNA5SP404-201ENST00000517118 132 ntBASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 MIR4781-201ENST00000585250 76 ntBASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 AL365205.2-201ENST00000594586 68 ntBASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 AL353770.2-201ENST00000620024 78 ntBASIC1.12□□□□□ -2.23
PCGF1Q9BSM1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
PCGF1Q9BSM1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
PCGF1Q9BSM1 Y_RNA.440-201ENST00000384120 114 ntBASIC1.11□□□□□ -2.23
PCGF1Q9BSM1 RNU7-67P-201ENST00000459003 62 ntBASIC1.11□□□□□ -2.23
PCGF1Q9BSM1 Y_RNA.676-201ENST00000516393 96 ntBASIC1.11□□□□□ -2.23
PCGF1Q9BSM1 RNU6-1189P-201ENST00000383958 107 ntBASIC1.1□□□□□ -2.23
PCGF1Q9BSM1 MIR618-201ENST00000385287 98 ntBASIC1.1□□□□□ -2.23
PCGF1Q9BSM1 Y_RNA.793-201ENST00000411222 111 ntBASIC1.1□□□□□ -2.23
PCGF1Q9BSM1 MRPL35P3-201ENST00000421557 364 ntBASIC1.1□□□□□ -2.23
PCGF1Q9BSM1 AC063976.4-201ENST00000421971 163 ntBASIC1.1□□□□□ -2.23
PCGF1Q9BSM1 AC002429.1-201ENST00000437672 148 ntBASIC1.1□□□□□ -2.23
PCGF1Q9BSM1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.1□□□□□ -2.23
PCGF1Q9BSM1 AL138752.1-201ENST00000452964 351 ntBASIC1.1□□□□□ -2.23
PCGF1Q9BSM1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.1□□□□□ -2.23
PCGF1Q9BSM1 RPS29P24-201ENST00000486345 171 ntBASIC1.1□□□□□ -2.23
PCGF1Q9BSM1 RNU11-2P-201ENST00000516898 142 ntBASIC1.1□□□□□ -2.23
PCGF1Q9BSM1 RNU6-958P-201ENST00000516995 106 ntBASIC1.1□□□□□ -2.23
PCGF1Q9BSM1 MIR4431-201ENST00000579990 94 ntBASIC1.1□□□□□ -2.23
PCGF1Q9BSM1 MIR6078-201ENST00000611069 100 ntBASIC1.1□□□□□ -2.23
PCGF1Q9BSM1 SEPT14P17-201ENST00000617978 177 ntBASIC1.1□□□□□ -2.23
PCGF1Q9BSM1 AC008163.1-202ENST00000636004 2889 ntBASIC1.1□□□□□ -2.23
PCGF1Q9BSM1 RNU6-1292P-201ENST00000383856 107 ntBASIC1.09□□□□□ -2.23
PCGF1Q9BSM1 SNORA70.7-201ENST00000384159 133 ntBASIC1.09□□□□□ -2.23
PCGF1Q9BSM1 MIR19B1-201ENST00000384829 87 ntBASIC1.09□□□□□ -2.23
PCGF1Q9BSM1 AC006461.1-201ENST00000412637 326 ntBASIC1.09□□□□□ -2.23
PCGF1Q9BSM1 RNU1-123P-201ENST00000458950 160 ntBASIC1.09□□□□□ -2.23
PCGF1Q9BSM1 snoU13.16-201ENST00000459350 104 ntBASIC1.09□□□□□ -2.23
PCGF1Q9BSM1 RN7SKP179-201ENST00000516126 217 ntBASIC1.09□□□□□ -2.23
PCGF1Q9BSM1 RNU7-40P-201ENST00000516397 64 ntBASIC1.09□□□□□ -2.23
PCGF1Q9BSM1 AP002392.1-201ENST00000537692 208 ntBASIC1.09□□□□□ -2.23
PCGF1Q9BSM1 MIR5197-201ENST00000583721 112 ntBASIC1.09□□□□□ -2.23
PCGF1Q9BSM1 AC072026.1-201ENST00000605023 201 ntBASIC1.09□□□□□ -2.23
PCGF1Q9BSM1 MIR6516-201ENST00000630554 81 ntBASIC1.09□□□□□ -2.23
PCGF1Q9BSM1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.08□□□□□ -2.24
PCGF1Q9BSM1 RNY1P10-201ENST00000363268 113 ntBASIC1.08□□□□□ -2.24
PCGF1Q9BSM1 RNU1-124P-201ENST00000363861 145 ntBASIC1.08□□□□□ -2.24
PCGF1Q9BSM1 RNU6-312P-201ENST00000364629 107 ntBASIC1.08□□□□□ -2.24
PCGF1Q9BSM1 Y_RNA.330-201ENST00000365230 109 ntBASIC1.08□□□□□ -2.24
PCGF1Q9BSM1 RNU6-913P-201ENST00000390913 95 ntBASIC1.08□□□□□ -2.24
PCGF1Q9BSM1 RNU7-73P-201ENST00000458743 63 ntBASIC1.08□□□□□ -2.24
PCGF1Q9BSM1 RNU7-90P-201ENST00000459216 62 ntBASIC1.08□□□□□ -2.24
PCGF1Q9BSM1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.08□□□□□ -2.24
PCGF1Q9BSM1 AC091895.1-201ENST00000624494 256 ntBASIC1.08□□□□□ -2.24
PCGF1Q9BSM1 RNU6-654P-201ENST00000364373 107 ntBASIC1.07□□□□□ -2.24
PCGF1Q9BSM1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.07□□□□□ -2.24
PCGF1Q9BSM1 SEPT7P4-201ENST00000437076 306 ntBASIC1.07□□□□□ -2.24
PCGF1Q9BSM1 RNU7-120P-201ENST00000459334 63 ntBASIC1.07□□□□□ -2.24
PCGF1Q9BSM1 RNU7-96P-201ENST00000459535 64 ntBASIC1.07□□□□□ -2.24
PCGF1Q9BSM1 RPS23P4-201ENST00000487908 423 ntBASIC1.07□□□□□ -2.24
PCGF1Q9BSM1 RNU6-998P-201ENST00000515894 101 ntBASIC1.07□□□□□ -2.24
PCGF1Q9BSM1 Y_RNA.700-201ENST00000516806 100 ntBASIC1.07□□□□□ -2.24
PCGF1Q9BSM1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
PCGF1Q9BSM1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
PCGF1Q9BSM1 AL035398.1-201ENST00000430869 322 ntBASIC1.06□□□□□ -2.24
PCGF1Q9BSM1 RNU7-53P-201ENST00000516705 60 ntBASIC1.06□□□□□ -2.24
PCGF1Q9BSM1 SNORA81.3-201ENST00000517283 198 ntBASIC1.06□□□□□ -2.24
PCGF1Q9BSM1 MIR3660-201ENST00000584845 100 ntBASIC1.06□□□□□ -2.24
PCGF1Q9BSM1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms