Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.65□□□□□ -2.31
SSX3Q99909 MIR1302-6-201ENST00000408466 90 ntBASIC0.65□□□□□ -2.31
SSX3Q99909 Y_RNA.590-201ENST00000410140 107 ntBASIC0.65□□□□□ -2.31
SSX3Q99909 RNU2-70P-201ENST00000410718 179 ntBASIC0.65□□□□□ -2.31
SSX3Q99909 MTATP8P1-201ENST00000467115 207 ntBASIC0.65□□□□□ -2.31
SSX3Q99909 Y_RNA.679-201ENST00000516416 91 ntBASIC0.65□□□□□ -2.31
SSX3Q99909 SNORA18.4-201ENST00000516440 124 ntBASIC0.65□□□□□ -2.31
SSX3Q99909 Y_RNA.720-201ENST00000517166 92 ntBASIC0.65□□□□□ -2.31
SSX3Q99909 AC108706.1-201ENST00000611053 297 ntBASIC0.65□□□□□ -2.31
SSX3Q99909 MIR6866-201ENST00000638146 69 ntBASIC0.65□□□□□ -2.31
SSX3Q99909 MIR335-201ENST00000362173 94 ntBASIC0.64□□□□□ -2.31
SSX3Q99909 RNU6-580P-201ENST00000365159 107 ntBASIC0.64□□□□□ -2.31
SSX3Q99909 RNY3P5-201ENST00000384127 102 ntBASIC0.64□□□□□ -2.31
SSX3Q99909 RNU2-55P-201ENST00000411146 174 ntBASIC0.64□□□□□ -2.31
SSX3Q99909 RNU6-938P-201ENST00000411285 103 ntBASIC0.64□□□□□ -2.31
SSX3Q99909 RNU7-73P-201ENST00000458743 63 ntBASIC0.64□□□□□ -2.31
SSX3Q99909 SNORD2.1-201ENST00000458762 69 ntBASIC0.64□□□□□ -2.31
SSX3Q99909 RNU7-53P-201ENST00000516705 60 ntBASIC0.64□□□□□ -2.31
SSX3Q99909 Y_RNA.82-201ENST00000363000 102 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 Y_RNA.92-201ENST00000363043 102 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 Y_RNA.235-201ENST00000364412 102 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 Y_RNA.306-201ENST00000365015 102 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 Y_RNA.312-201ENST00000365089 102 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 Y_RNA.322-201ENST00000365151 102 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SSX3Q99909 Y_RNA.432-201ENST00000384087 111 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 MT-TT-201ENST00000387460 66 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 RNU6-651P-201ENST00000411040 105 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 AC090844.1-201ENST00000422019 156 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 AC004941.2-201ENST00000427009 228 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 Y_RNA.650-201ENST00000459002 102 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 RPS29P24-201ENST00000486345 171 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 SNORD36C-201ENST00000516733 66 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 Y_RNA.777-201ENST00000516982 102 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 Y_RNA.771-201ENST00000598668 102 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 MIR8062-201ENST00000621515 85 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 MIR6835-201ENST00000621552 64 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 Y_RNA.789-201ENST00000622480 102 ntBASIC0.63□□□□□ -2.31
SSX3Q99909 Y_RNA.66-201ENST00000362862 102 ntBASIC0.62□□□□□ -2.31
SSX3Q99909 Y_RNA.634-201ENST00000364811 113 ntBASIC0.62□□□□□ -2.31
SSX3Q99909 RNU6-934P-201ENST00000365154 107 ntBASIC0.62□□□□□ -2.31
SSX3Q99909 RNU6-484P-201ENST00000384016 107 ntBASIC0.62□□□□□ -2.31
SSX3Q99909 Y_RNA.461-201ENST00000384263 103 ntBASIC0.62□□□□□ -2.31
SSX3Q99909 RNU6-1160P-201ENST00000384546 104 ntBASIC0.62□□□□□ -2.31
SSX3Q99909 SNORD38B-201ENST00000384690 67 ntBASIC0.62□□□□□ -2.31
SSX3Q99909 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
SSX3Q99909 RNU1-119P-201ENST00000391122 165 ntBASIC0.62□□□□□ -2.31
SSX3Q99909 Y_RNA.622-201ENST00000411091 108 ntBASIC0.62□□□□□ -2.31
SSX3Q99909 snoU13.21-201ENST00000459368 105 ntBASIC0.62□□□□□ -2.31
SSX3Q99909 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.62□□□□□ -2.31
SSX3Q99909 MIR5000-201ENST00000577717 103 ntBASIC0.62□□□□□ -2.31
SSX3Q99909 AC011195.1-201ENST00000578177 177 ntBASIC0.62□□□□□ -2.31
SSX3Q99909 SNORD38B-202ENST00000625943 69 ntBASIC0.62□□□□□ -2.31
SSX3Q99909 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
SSX3Q99909 Y_RNA.91-201ENST00000363042 107 ntBASIC0.61□□□□□ -2.31
SSX3Q99909 SNORA63-201ENST00000363450 132 ntBASIC0.61□□□□□ -2.31
SSX3Q99909 Y_RNA.199-201ENST00000364014 102 ntBASIC0.61□□□□□ -2.31
SSX3Q99909 Y_RNA.483-201ENST00000384380 101 ntBASIC0.61□□□□□ -2.31
SSX3Q99909 RNU6-913P-201ENST00000390913 95 ntBASIC0.61□□□□□ -2.31
SSX3Q99909 AL606845.1-201ENST00000404881 255 ntBASIC0.61□□□□□ -2.31
SSX3Q99909 SNORD83.1-201ENST00000411362 77 ntBASIC0.61□□□□□ -2.31
SSX3Q99909 AC244098.3-201ENST00000424803 96 ntBASIC0.61□□□□□ -2.31
SSX3Q99909 MTND5P15-201ENST00000434246 349 ntBASIC0.61□□□□□ -2.31
SSX3Q99909 RNU7-62P-201ENST00000458856 62 ntBASIC0.61□□□□□ -2.31
SSX3Q99909 RNA5SP153-201ENST00000516498 76 ntBASIC0.61□□□□□ -2.31
SSX3Q99909 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
SSX3Q99909 AC133485.1-201ENST00000567176 124 ntBASIC0.61□□□□□ -2.31
SSX3Q99909 AC138907.6-201ENST00000568401 126 ntBASIC0.61□□□□□ -2.31
SSX3Q99909 AC022709.1-201ENST00000615967 87 ntBASIC0.61□□□□□ -2.31
SSX3Q99909 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
SSX3Q99909 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
SSX3Q99909 SNORA63C-201ENST00000364578 129 ntBASIC0.6□□□□□ -2.31
SSX3Q99909 Y_RNA.326-201ENST00000365176 113 ntBASIC0.6□□□□□ -2.31
SSX3Q99909 Y_RNA.410-201ENST00000383992 113 ntBASIC0.6□□□□□ -2.31
SSX3Q99909 Y_RNA.574-201ENST00000384766 95 ntBASIC0.6□□□□□ -2.31
SSX3Q99909 MIR616-201ENST00000385293 97 ntBASIC0.6□□□□□ -2.31
SSX3Q99909 MT-TW-201ENST00000387382 68 ntBASIC0.6□□□□□ -2.31
SSX3Q99909 AC244023.1-201ENST00000426884 112 ntBASIC0.6□□□□□ -2.31
SSX3Q99909 AF228730.3-201ENST00000436691 102 ntBASIC0.6□□□□□ -2.31
SSX3Q99909 SNRPGP8-201ENST00000454064 226 ntBASIC0.6□□□□□ -2.31
SSX3Q99909 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.6□□□□□ -2.31
SSX3Q99909 RNU6-977P-201ENST00000516411 103 ntBASIC0.6□□□□□ -2.31
SSX3Q99909 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
SSX3Q99909 AL442663.2-201ENST00000554385 511 ntBASIC0.6□□□□□ -2.31
SSX3Q99909 MIR4771-2-201ENST00000577758 74 ntBASIC0.6□□□□□ -2.31
SSX3Q99909 MIR4771-1-201ENST00000582617 74 ntBASIC0.6□□□□□ -2.31
SSX3Q99909 AC242498.1-201ENST00000604134 111 ntBASIC0.6□□□□□ -2.31
SSX3Q99909 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.6□□□□□ -2.31
SSX3Q99909 MIR6515-201ENST00000619843 57 ntBASIC0.6□□□□□ -2.31
SSX3Q99909 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SSX3Q99909 snoU2_19.4-201ENST00000364329 80 ntBASIC0.59□□□□□ -2.31
SSX3Q99909 SNORA1.1-201ENST00000364671 133 ntBASIC0.59□□□□□ -2.31
SSX3Q99909 RNU6-1189P-201ENST00000383958 107 ntBASIC0.59□□□□□ -2.31
SSX3Q99909 MIR606-201ENST00000384851 96 ntBASIC0.59□□□□□ -2.31
SSX3Q99909 RNU6-1228P-201ENST00000391014 107 ntBASIC0.59□□□□□ -2.31
SSX3Q99909 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.59□□□□□ -2.31
SSX3Q99909 AL138752.1-201ENST00000452964 351 ntBASIC0.59□□□□□ -2.31
SSX3Q99909 RNU7-96P-201ENST00000459535 64 ntBASIC0.59□□□□□ -2.31
SSX3Q99909 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.59□□□□□ -2.31
SSX3Q99909 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms