Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 MIR548AR-201ENST00000582191 57 ntBASIC1.76□□□□□ -2.13
SMOQ99835 AC012493.3-201ENST00000604494 112 ntBASIC1.76□□□□□ -2.13
SMOQ99835 MIR502-201ENST00000606349 86 ntBASIC1.76□□□□□ -2.13
SMOQ99835 AC011603.4-201ENST00000611325 277 ntBASIC1.76□□□□□ -2.13
SMOQ99835 TUG1_4.1-201ENST00000619464 181 ntBASIC1.76□□□□□ -2.13
SMOQ99835 SNORD18B-201ENST00000365659 72 ntBASIC1.75□□□□□ -2.13
SMOQ99835 MIR653-201ENST00000385279 96 ntBASIC1.75□□□□□ -2.13
SMOQ99835 SNORA40.5-201ENST00000391061 128 ntBASIC1.75□□□□□ -2.13
SMOQ99835 SNORA17.3-201ENST00000391159 129 ntBASIC1.75□□□□□ -2.13
SMOQ99835 Y_RNA.651-201ENST00000459380 103 ntBASIC1.75□□□□□ -2.13
SMOQ99835 MIR3121-201ENST00000579680 77 ntBASIC1.75□□□□□ -2.13
SMOQ99835 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-34-201ENST00000362441 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-12-201ENST00000362583 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-29-201ENST00000362834 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-9-201ENST00000362912 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-21-201ENST00000362963 81 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-14-201ENST00000363090 81 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-13-201ENST00000363358 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-41-201ENST00000363608 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-11-201ENST00000363616 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-5-201ENST00000363633 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-39-201ENST00000363694 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-4-201ENST00000363810 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-16-201ENST00000363887 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-6-201ENST00000363942 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-42-201ENST00000364273 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-15-201ENST00000364809 81 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-1-201ENST00000364961 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-26-201ENST00000365067 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-10-201ENST00000365073 81 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-43-201ENST00000365503 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-36-201ENST00000365629 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORA27-201ENST00000384323 126 ntBASIC1.74□□□□□ -2.13
SMOQ99835 Y_RNA.692-201ENST00000516627 105 ntBASIC1.74□□□□□ -2.13
SMOQ99835 RNU6-1234P-201ENST00000516877 103 ntBASIC1.74□□□□□ -2.13
SMOQ99835 SNORA74.3-201ENST00000517108 154 ntBASIC1.74□□□□□ -2.13
SMOQ99835 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.74□□□□□ -2.13
SMOQ99835 SNORD115-40-201ENST00000606510 82 ntBASIC1.74□□□□□ -2.13
SMOQ99835 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SMOQ99835 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SMOQ99835 Y_RNA.370-201ENST00000365589 108 ntBASIC1.73□□□□□ -2.13
SMOQ99835 MIR570-201ENST00000384917 97 ntBASIC1.73□□□□□ -2.13
SMOQ99835 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.73□□□□□ -2.13
SMOQ99835 RPL31P63-201ENST00000422565 375 ntBASIC1.73□□□□□ -2.13
SMOQ99835 RNU5E-3P-201ENST00000515913 68 ntBASIC1.73□□□□□ -2.13
SMOQ99835 AC090049.2-201ENST00000550377 109 ntBASIC1.73□□□□□ -2.13
SMOQ99835 AL022345.2-201ENST00000606307 135 ntBASIC1.73□□□□□ -2.13
SMOQ99835 WWP1P1-201ENST00000466609 2769 ntBASIC1.72□□□□□ -2.13
SMOQ99835 Y_RNA.280-201ENST00000364765 112 ntBASIC1.72□□□□□ -2.13
SMOQ99835 Y_RNA.351-201ENST00000365436 96 ntBASIC1.72□□□□□ -2.13
SMOQ99835 MIR539-201ENST00000365690 78 ntBASIC1.72□□□□□ -2.13
SMOQ99835 MIR30A-201ENST00000385092 71 ntBASIC1.72□□□□□ -2.13
SMOQ99835 AC024614.2-201ENST00000577584 372 ntBASIC1.72□□□□□ -2.13
SMOQ99835 MIR8063-201ENST00000621930 81 ntBASIC1.72□□□□□ -2.13
SMOQ99835 MIR342-201ENST00000362212 99 ntBASIC1.71□□□□□ -2.14
SMOQ99835 MIR302D-201ENST00000362275 68 ntBASIC1.71□□□□□ -2.14
SMOQ99835 Y_RNA.71-201ENST00000362892 104 ntBASIC1.71□□□□□ -2.14
SMOQ99835 Y_RNA.114-201ENST00000363265 113 ntBASIC1.71□□□□□ -2.14
SMOQ99835 SNORA1.2-201ENST00000365189 134 ntBASIC1.71□□□□□ -2.14
SMOQ99835 MIR499A-201ENST00000384903 122 ntBASIC1.71□□□□□ -2.14
SMOQ99835 MIR489-201ENST00000384923 84 ntBASIC1.71□□□□□ -2.14
SMOQ99835 SNORD41-201ENST00000386967 70 ntBASIC1.71□□□□□ -2.14
SMOQ99835 SNX2P2-201ENST00000424553 323 ntBASIC1.71□□□□□ -2.14
SMOQ99835 AC108667.1-201ENST00000428618 249 ntBASIC1.71□□□□□ -2.14
SMOQ99835 MTATP6P21-201ENST00000440681 189 ntBASIC1.71□□□□□ -2.14
SMOQ99835 RPS29P24-201ENST00000486345 171 ntBASIC1.71□□□□□ -2.14
SMOQ99835 RNU2-13P-201ENST00000515909 113 ntBASIC1.71□□□□□ -2.14
SMOQ99835 SNORA31.4-201ENST00000516049 129 ntBASIC1.71□□□□□ -2.14
SMOQ99835 RNU6-922P-201ENST00000516753 99 ntBASIC1.71□□□□□ -2.14
SMOQ99835 Y_RNA.757-201ENST00000578934 114 ntBASIC1.71□□□□□ -2.14
SMOQ99835 AC091932.4-201ENST00000623386 200 ntBASIC1.71□□□□□ -2.14
SMOQ99835 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SMOQ99835 RNU6-235P-201ENST00000362644 107 ntBASIC1.7□□□□□ -2.14
SMOQ99835 RNU6-1117P-201ENST00000384525 104 ntBASIC1.7□□□□□ -2.14
SMOQ99835 snoU13.9-201ENST00000458927 103 ntBASIC1.7□□□□□ -2.14
SMOQ99835 RNU6-998P-201ENST00000515894 101 ntBASIC1.7□□□□□ -2.14
SMOQ99835 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.7□□□□□ -2.14
SMOQ99835 AC108081.1-201ENST00000604358 221 ntBASIC1.7□□□□□ -2.14
SMOQ99835 snoU13.31-201ENST00000607291 104 ntBASIC1.7□□□□□ -2.14
SMOQ99835 AL365222.1-201ENST00000614661 98 ntBASIC1.7□□□□□ -2.14
SMOQ99835 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.7□□□□□ -2.14
SMOQ99835 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SMOQ99835 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SMOQ99835 AL596211.1-201ENST00000569873 2277 ntBASIC1.69□□□□□ -2.14
SMOQ99835 SNORA25.9-201ENST00000365087 128 ntBASIC1.69□□□□□ -2.14
SMOQ99835 RNU6-22P-201ENST00000384355 107 ntBASIC1.69□□□□□ -2.14
SMOQ99835 Y_RNA.525-201ENST00000384570 113 ntBASIC1.69□□□□□ -2.14
SMOQ99835 AL451046.2-201ENST00000403074 277 ntBASIC1.69□□□□□ -2.14
SMOQ99835 HSPE1P24-201ENST00000450782 238 ntBASIC1.69□□□□□ -2.14
SMOQ99835 RNU6-322P-201ENST00000516010 103 ntBASIC1.69□□□□□ -2.14
SMOQ99835 RNU7-70P-201ENST00000516941 66 ntBASIC1.69□□□□□ -2.14
SMOQ99835 MIR4764-201ENST00000580680 88 ntBASIC1.69□□□□□ -2.14
SMOQ99835 MIR4303-201ENST00000581299 66 ntBASIC1.69□□□□□ -2.14
SMOQ99835 MIR4791-201ENST00000607666 84 ntBASIC1.69□□□□□ -2.14
SMOQ99835 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.69□□□□□ -2.14
SMOQ99835 MIR378A-201ENST00000362177 66 ntBASIC1.68□□□□□ -2.14
SMOQ99835 RNU1-133P-201ENST00000364867 167 ntBASIC1.68□□□□□ -2.14
SMOQ99835 SNORD1A-201ENST00000364968 72 ntBASIC1.68□□□□□ -2.14
SMOQ99835 MIR518E-201ENST00000385252 88 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms