Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SIN3AQ96ST3 RNA5SP327-201ENST00000362494 101 ntBASIC1.27□□□□□ -2.21
SIN3AQ96ST3 Y_RNA.233-201ENST00000364407 101 ntBASIC1.27□□□□□ -2.21
SIN3AQ96ST3 SNORA1-201ENST00000384107 130 ntBASIC1.27□□□□□ -2.21
SIN3AQ96ST3 Y_RNA.494-201ENST00000384432 111 ntBASIC1.27□□□□□ -2.21
SIN3AQ96ST3 AF228730.3-201ENST00000436691 102 ntBASIC1.27□□□□□ -2.21
SIN3AQ96ST3 AP003716.2-201ENST00000528260 108 ntBASIC1.27□□□□□ -2.21
SIN3AQ96ST3 MRPS18CP4-201ENST00000535821 231 ntBASIC1.27□□□□□ -2.21
SIN3AQ96ST3 FAM71BP1-201ENST00000604431 523 ntBASIC1.27□□□□□ -2.21
SIN3AQ96ST3 RNU6-978P-201ENST00000364371 103 ntBASIC1.26□□□□□ -2.21
SIN3AQ96ST3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.26□□□□□ -2.21
SIN3AQ96ST3 Y_RNA.370-201ENST00000365589 108 ntBASIC1.26□□□□□ -2.21
SIN3AQ96ST3 SNORA79-201ENST00000408376 140 ntBASIC1.26□□□□□ -2.21
SIN3AQ96ST3 AC087499.4-201ENST00000448505 178 ntBASIC1.26□□□□□ -2.21
SIN3AQ96ST3 SNORD36C-201ENST00000516733 66 ntBASIC1.26□□□□□ -2.21
SIN3AQ96ST3 Y_RNA.116-201ENST00000363292 103 ntBASIC1.25□□□□□ -2.21
SIN3AQ96ST3 RNA5SP48-201ENST00000363969 126 ntBASIC1.25□□□□□ -2.21
SIN3AQ96ST3 SNORA1.2-201ENST00000365189 134 ntBASIC1.25□□□□□ -2.21
SIN3AQ96ST3 RNU6-643P-201ENST00000384018 107 ntBASIC1.25□□□□□ -2.21
SIN3AQ96ST3 RNU6-847P-201ENST00000411115 108 ntBASIC1.25□□□□□ -2.21
SIN3AQ96ST3 AL138752.1-201ENST00000452964 351 ntBASIC1.25□□□□□ -2.21
SIN3AQ96ST3 RPS26P48-201ENST00000491713 339 ntBASIC1.25□□□□□ -2.21
SIN3AQ96ST3 AL133373.1-201ENST00000497098 94 ntBASIC1.25□□□□□ -2.21
SIN3AQ96ST3 SNORA18.4-201ENST00000516440 124 ntBASIC1.25□□□□□ -2.21
SIN3AQ96ST3 AP003484.1-201ENST00000530974 250 ntBASIC1.25□□□□□ -2.21
SIN3AQ96ST3 MIR4791-201ENST00000607666 84 ntBASIC1.25□□□□□ -2.21
SIN3AQ96ST3 AC134878.1-201ENST00000619901 243 ntBASIC1.25□□□□□ -2.21
SIN3AQ96ST3 MIR376A2-201ENST00000636782 80 ntBASIC1.25□□□□□ -2.21
SIN3AQ96ST3 Y_RNA.241-201ENST00000364470 117 ntBASIC1.24□□□□□ -2.21
SIN3AQ96ST3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.24□□□□□ -2.21
SIN3AQ96ST3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.24□□□□□ -2.21
SIN3AQ96ST3 Y_RNA.537-201ENST00000384626 109 ntBASIC1.24□□□□□ -2.21
SIN3AQ96ST3 SNORD77.3-201ENST00000391113 65 ntBASIC1.24□□□□□ -2.21
SIN3AQ96ST3 Y_RNA.793-201ENST00000411222 111 ntBASIC1.24□□□□□ -2.21
SIN3AQ96ST3 Y_RNA.700-201ENST00000516806 100 ntBASIC1.24□□□□□ -2.21
SIN3AQ96ST3 AP002392.1-201ENST00000537692 208 ntBASIC1.24□□□□□ -2.21
SIN3AQ96ST3 MIR378D2-201ENST00000580636 98 ntBASIC1.24□□□□□ -2.21
SIN3AQ96ST3 AC072026.1-201ENST00000605023 201 ntBASIC1.24□□□□□ -2.21
SIN3AQ96ST3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.24□□□□□ -2.21
SIN3AQ96ST3 MIR4251-201ENST00000635819 61 ntBASIC1.24□□□□□ -2.21
SIN3AQ96ST3 SNORD115-34-201ENST00000362441 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-12-201ENST00000362583 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-29-201ENST00000362834 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-9-201ENST00000362912 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-21-201ENST00000362963 81 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-14-201ENST00000363090 81 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORA25.3-201ENST00000363205 127 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-13-201ENST00000363358 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-41-201ENST00000363608 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-11-201ENST00000363616 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-5-201ENST00000363633 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-39-201ENST00000363694 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-4-201ENST00000363810 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-16-201ENST00000363887 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-6-201ENST00000363942 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-42-201ENST00000364273 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-15-201ENST00000364809 81 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-1-201ENST00000364961 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-26-201ENST00000365067 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-10-201ENST00000365073 81 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-43-201ENST00000365503 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-36-201ENST00000365629 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORA24-201ENST00000384096 131 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 Y_RNA.785-201ENST00000384290 109 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 RNU6-910P-201ENST00000390844 107 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 MIR1302-7-201ENST00000408841 72 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.23□□□□□ -2.21
SIN3AQ96ST3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.23□□□□□ -2.21
SIN3AQ96ST3 RNU7-120P-201ENST00000459334 63 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 AL365205.2-201ENST00000594586 68 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 SNORD115-40-201ENST00000606510 82 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 AC090425.1-201ENST00000610007 140 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 MIR7111-201ENST00000619751 72 ntBASIC1.23□□□□□ -2.21
SIN3AQ96ST3 Y_RNA.29-201ENST00000362570 113 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 RNA5SP264-201ENST00000363115 107 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 SNORA25.8-201ENST00000364831 128 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 RNU6-1318P-201ENST00000365389 103 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 SNORA22-201ENST00000383907 134 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 SNORA51.10-201ENST00000384418 136 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 SNORA22C-201ENST00000384614 134 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 Y_RNA.542-201ENST00000384641 111 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 MIR518E-201ENST00000385252 88 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
SIN3AQ96ST3 SNORA40.5-201ENST00000391061 128 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 MIR1185-1-201ENST00000408598 86 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.22□□□□□ -2.21
SIN3AQ96ST3 SNORA31.4-201ENST00000516049 129 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 SNORD116-25-201ENST00000516517 92 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 SNORA81.3-201ENST00000517283 198 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 MIR4431-201ENST00000579990 94 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 MIR3129-201ENST00000581095 76 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 AL022345.2-201ENST00000606307 135 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 AC243994.1-201ENST00000618627 109 ntBASIC1.22□□□□□ -2.21
SIN3AQ96ST3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
SIN3AQ96ST3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.21□□□□□ -2.22
SIN3AQ96ST3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
SIN3AQ96ST3 RNU6-682P-201ENST00000363843 106 ntBASIC1.21□□□□□ -2.22
SIN3AQ96ST3 RNU6-312P-201ENST00000364629 107 ntBASIC1.21□□□□□ -2.22
SIN3AQ96ST3 Y_RNA.410-201ENST00000383992 113 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms