Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC105081.1-201ENST00000617727 106 ntBASIC-1.22□□□□□ -2.6
CCDC42Q96M95 AC124864.2-201ENST00000624736 186 ntBASIC-1.22□□□□□ -2.6
CCDC42Q96M95 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.23□□□□□ -2.61
CCDC42Q96M95 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.23□□□□□ -2.61
CCDC42Q96M95 RNU7-104P-201ENST00000459398 79 ntBASIC-1.23□□□□□ -2.61
CCDC42Q96M95 AC010424.1-201ENST00000506336 297 ntBASIC-1.23□□□□□ -2.61
CCDC42Q96M95 RNA5SP66-201ENST00000517178 101 ntBASIC-1.23□□□□□ -2.61
CCDC42Q96M95 AC093424.1-201ENST00000604999 338 ntBASIC-1.23□□□□□ -2.61
CCDC42Q96M95 AC245008.1-201ENST00000608123 476 ntBASIC-1.23□□□□□ -2.61
CCDC42Q96M95 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.23□□□□□ -2.61
CCDC42Q96M95 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.24□□□□□ -2.61
CCDC42Q96M95 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.24□□□□□ -2.61
CCDC42Q96M95 MIR548A2-201ENST00000384956 97 ntBASIC-1.24□□□□□ -2.61
CCDC42Q96M95 SNORA69.1-201ENST00000390904 137 ntBASIC-1.24□□□□□ -2.61
CCDC42Q96M95 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.24□□□□□ -2.61
CCDC42Q96M95 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.24□□□□□ -2.61
CCDC42Q96M95 RNU6-693P-201ENST00000516134 107 ntBASIC-1.24□□□□□ -2.61
CCDC42Q96M95 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.24□□□□□ -2.61
CCDC42Q96M95 MIR4436A-201ENST00000585278 85 ntBASIC-1.24□□□□□ -2.61
CCDC42Q96M95 MTND5P26-201ENST00000426018 1752 ntBASIC-1.25□□□□□ -2.61
CCDC42Q96M95 RNA5SP403-201ENST00000363598 108 ntBASIC-1.25□□□□□ -2.61
CCDC42Q96M95 RNU6-702P-201ENST00000364982 107 ntBASIC-1.25□□□□□ -2.61
CCDC42Q96M95 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.25□□□□□ -2.61
CCDC42Q96M95 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.25□□□□□ -2.61
CCDC42Q96M95 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.25□□□□□ -2.61
CCDC42Q96M95 RNU4-58P-201ENST00000363192 141 ntBASIC-1.26□□□□□ -2.61
CCDC42Q96M95 SNORD24-201ENST00000383884 75 ntBASIC-1.26□□□□□ -2.61
CCDC42Q96M95 SNORA3B-201ENST00000391305 131 ntBASIC-1.26□□□□□ -2.61
CCDC42Q96M95 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.26□□□□□ -2.61
CCDC42Q96M95 AL022718.1-201ENST00000412004 84 ntBASIC-1.26□□□□□ -2.61
CCDC42Q96M95 AC019235.1-201ENST00000503847 207 ntBASIC-1.26□□□□□ -2.61
CCDC42Q96M95 RNU6-758P-201ENST00000516292 89 ntBASIC-1.26□□□□□ -2.61
CCDC42Q96M95 RNU6-531P-201ENST00000516694 104 ntBASIC-1.26□□□□□ -2.61
CCDC42Q96M95 MIR4790-201ENST00000577799 79 ntBASIC-1.26□□□□□ -2.61
CCDC42Q96M95 AC005899.2-201ENST00000584353 90 ntBASIC-1.26□□□□□ -2.61
CCDC42Q96M95 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.26□□□□□ -2.61
CCDC42Q96M95 AL021707.8-201ENST00000609428 183 ntBASIC-1.26□□□□□ -2.61
CCDC42Q96M95 AC087588.2-201ENST00000617667 426 ntBASIC-1.26□□□□□ -2.61
CCDC42Q96M95 AC090617.10-201ENST00000624308 134 ntBASIC-1.26□□□□□ -2.61
CCDC42Q96M95 MTND5P32-201ENST00000560711 1802 ntBASIC-1.26□□□□□ -2.61
CCDC42Q96M95 RNU6-593P-201ENST00000364716 112 ntBASIC-1.27□□□□□ -2.61
CCDC42Q96M95 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.27□□□□□ -2.61
CCDC42Q96M95 RNU6-831P-201ENST00000384548 107 ntBASIC-1.27□□□□□ -2.61
CCDC42Q96M95 AL160004.2-201ENST00000432935 350 ntBASIC-1.27□□□□□ -2.61
CCDC42Q96M95 RNU7-45P-201ENST00000459460 63 ntBASIC-1.27□□□□□ -2.61
CCDC42Q96M95 DEFB131E-201ENST00000532329 154 ntBASIC-1.27□□□□□ -2.61
CCDC42Q96M95 MIR4662B-201ENST00000579498 81 ntBASIC-1.27□□□□□ -2.61
CCDC42Q96M95 MIR4659A-201ENST00000580269 81 ntBASIC-1.27□□□□□ -2.61
CCDC42Q96M95 AC108676.2-201ENST00000605225 163 ntBASIC-1.27□□□□□ -2.61
CCDC42Q96M95 AC011476.5-201ENST00000615594 130 ntBASIC-1.27□□□□□ -2.61
CCDC42Q96M95 MIR302B-201ENST00000362188 73 ntBASIC-1.28□□□□□ -2.61
CCDC42Q96M95 RNU6-509P-201ENST00000363519 107 ntBASIC-1.28□□□□□ -2.61
CCDC42Q96M95 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.28□□□□□ -2.61
CCDC42Q96M95 SNORA72.4-201ENST00000384174 132 ntBASIC-1.28□□□□□ -2.61
CCDC42Q96M95 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.28□□□□□ -2.61
CCDC42Q96M95 RNU2-14P-201ENST00000411053 191 ntBASIC-1.28□□□□□ -2.61
CCDC42Q96M95 MTND5P5-201ENST00000503764 376 ntBASIC-1.28□□□□□ -2.61
CCDC42Q96M95 AC074198.2-201ENST00000508153 258 ntBASIC-1.28□□□□□ -2.61
CCDC42Q96M95 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.28□□□□□ -2.61
CCDC42Q96M95 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.28□□□□□ -2.61
CCDC42Q96M95 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.28□□□□□ -2.61
CCDC42Q96M95 AL356055.1-201ENST00000602528 446 ntBASIC-1.28□□□□□ -2.61
CCDC42Q96M95 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.29□□□□□ -2.62
CCDC42Q96M95 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.29□□□□□ -2.62
CCDC42Q96M95 RNU6-490P-201ENST00000362985 107 ntBASIC-1.29□□□□□ -2.62
CCDC42Q96M95 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.29□□□□□ -2.62
CCDC42Q96M95 RNU6-780P-201ENST00000391030 104 ntBASIC-1.29□□□□□ -2.62
CCDC42Q96M95 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.29□□□□□ -2.62
CCDC42Q96M95 MIR4423-201ENST00000580922 80 ntBASIC-1.29□□□□□ -2.62
CCDC42Q96M95 MIR342-201ENST00000362212 99 ntBASIC-1.3□□□□□ -2.62
CCDC42Q96M95 SNORD81.1-201ENST00000363064 77 ntBASIC-1.3□□□□□ -2.62
CCDC42Q96M95 RNU6-99P-201ENST00000364721 107 ntBASIC-1.3□□□□□ -2.62
CCDC42Q96M95 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.3□□□□□ -2.62
CCDC42Q96M95 RNY1P13-201ENST00000365030 105 ntBASIC-1.3□□□□□ -2.62
CCDC42Q96M95 RNU6-47P-201ENST00000383866 107 ntBASIC-1.3□□□□□ -2.62
CCDC42Q96M95 RNU6-888P-201ENST00000363010 101 ntBASIC-1.31□□□□□ -2.62
CCDC42Q96M95 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.31□□□□□ -2.62
CCDC42Q96M95 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.31□□□□□ -2.62
CCDC42Q96M95 SNORD61-201ENST00000384252 73 ntBASIC-1.31□□□□□ -2.62
CCDC42Q96M95 RNU6-373P-201ENST00000411247 98 ntBASIC-1.31□□□□□ -2.62
CCDC42Q96M95 AC009161.1-201ENST00000417306 376 ntBASIC-1.31□□□□□ -2.62
CCDC42Q96M95 Z95118.1-201ENST00000421372 247 ntBASIC-1.31□□□□□ -2.62
CCDC42Q96M95 RNA5SP484-201ENST00000458857 111 ntBASIC-1.31□□□□□ -2.62
CCDC42Q96M95 AC010655.3-201ENST00000478818 450 ntBASIC-1.31□□□□□ -2.62
CCDC42Q96M95 RNU6-307P-201ENST00000516743 106 ntBASIC-1.31□□□□□ -2.62
CCDC42Q96M95 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.32□□□□□ -2.62
CCDC42Q96M95 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.32□□□□□ -2.62
CCDC42Q96M95 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.32□□□□□ -2.62
CCDC42Q96M95 RNU4-63P-201ENST00000411313 118 ntBASIC-1.32□□□□□ -2.62
CCDC42Q96M95 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.32□□□□□ -2.62
CCDC42Q96M95 SNORD77.4-201ENST00000516158 81 ntBASIC-1.32□□□□□ -2.62
CCDC42Q96M95 AL049861.1-201ENST00000603130 150 ntBASIC-1.32□□□□□ -2.62
CCDC42Q96M95 AC093726.3-201ENST00000637588 150 ntBASIC-1.32□□□□□ -2.62
CCDC42Q96M95 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.32□□□□□ -2.62
CCDC42Q96M95 RNU6-801P-201ENST00000364087 105 ntBASIC-1.33□□□□□ -2.62
CCDC42Q96M95 RNU6-865P-201ENST00000364772 107 ntBASIC-1.33□□□□□ -2.62
CCDC42Q96M95 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.33□□□□□ -2.62
CCDC42Q96M95 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.33□□□□□ -2.62
CCDC42Q96M95 AF228730.3-201ENST00000436691 102 ntBASIC-1.33□□□□□ -2.62
CCDC42Q96M95 AC024614.3-201ENST00000637860 256 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms