Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 RNU4-70P-201ENST00000384579 139 ntBASIC1.36□□□□□ -2.19
CCDC138Q96M89 MIR1276-201ENST00000408707 83 ntBASIC1.36□□□□□ -2.19
CCDC138Q96M89 RPS26P48-201ENST00000491713 339 ntBASIC1.36□□□□□ -2.19
CCDC138Q96M89 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.36□□□□□ -2.19
CCDC138Q96M89 RNU11-2P-201ENST00000516898 142 ntBASIC1.36□□□□□ -2.19
CCDC138Q96M89 AC009779.6-201ENST00000603972 165 ntBASIC1.36□□□□□ -2.19
CCDC138Q96M89 AC108706.1-201ENST00000611053 297 ntBASIC1.36□□□□□ -2.19
CCDC138Q96M89 ZNF209P-201ENST00000593450 2304 ntBASIC1.35□□□□□ -2.19
CCDC138Q96M89 MIR1185-1-201ENST00000408598 86 ntBASIC1.35□□□□□ -2.19
CCDC138Q96M89 RNU6-938P-201ENST00000411285 103 ntBASIC1.35□□□□□ -2.19
CCDC138Q96M89 AC063976.4-201ENST00000421971 163 ntBASIC1.35□□□□□ -2.19
CCDC138Q96M89 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.35□□□□□ -2.19
CCDC138Q96M89 RNU7-21P-201ENST00000459430 62 ntBASIC1.35□□□□□ -2.19
CCDC138Q96M89 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC138Q96M89 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
CCDC138Q96M89 RNA5SP404-201ENST00000517118 132 ntBASIC1.35□□□□□ -2.19
CCDC138Q96M89 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.35□□□□□ -2.19
CCDC138Q96M89 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.34□□□□□ -2.19
CCDC138Q96M89 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.34□□□□□ -2.19
CCDC138Q96M89 Y_RNA.182-201ENST00000363880 111 ntBASIC1.34□□□□□ -2.19
CCDC138Q96M89 Y_RNA.410-201ENST00000383992 113 ntBASIC1.34□□□□□ -2.19
CCDC138Q96M89 SNORA70.7-201ENST00000384159 133 ntBASIC1.34□□□□□ -2.19
CCDC138Q96M89 RNU6-939P-201ENST00000384634 107 ntBASIC1.34□□□□□ -2.19
CCDC138Q96M89 SNORA75.2-201ENST00000391138 150 ntBASIC1.34□□□□□ -2.19
CCDC138Q96M89 SNORA75.3-201ENST00000391231 150 ntBASIC1.34□□□□□ -2.19
CCDC138Q96M89 RNU7-90P-201ENST00000459216 62 ntBASIC1.34□□□□□ -2.19
CCDC138Q96M89 Z83818.1-201ENST00000603584 150 ntBASIC1.34□□□□□ -2.19
CCDC138Q96M89 RMST_2.1-201ENST00000617263 136 ntBASIC1.34□□□□□ -2.19
CCDC138Q96M89 SEPT14P17-201ENST00000617978 177 ntBASIC1.34□□□□□ -2.19
CCDC138Q96M89 MTND1P7-201ENST00000632801 297 ntBASIC1.34□□□□□ -2.19
CCDC138Q96M89 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
CCDC138Q96M89 MIR411-201ENST00000362239 96 ntBASIC1.33□□□□□ -2.2
CCDC138Q96M89 Y_RNA.23-201ENST00000362496 106 ntBASIC1.33□□□□□ -2.2
CCDC138Q96M89 SNORA24-201ENST00000384096 131 ntBASIC1.33□□□□□ -2.2
CCDC138Q96M89 Y_RNA.476-201ENST00000384347 108 ntBASIC1.33□□□□□ -2.2
CCDC138Q96M89 Y_RNA.494-201ENST00000384432 111 ntBASIC1.33□□□□□ -2.2
CCDC138Q96M89 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CCDC138Q96M89 AF228730.3-201ENST00000436691 102 ntBASIC1.33□□□□□ -2.2
CCDC138Q96M89 AC002429.1-201ENST00000437672 148 ntBASIC1.33□□□□□ -2.2
CCDC138Q96M89 RPS29P29-201ENST00000456396 171 ntBASIC1.33□□□□□ -2.2
CCDC138Q96M89 RNU7-67P-201ENST00000459003 62 ntBASIC1.33□□□□□ -2.2
CCDC138Q96M89 SNORA18.4-201ENST00000516440 124 ntBASIC1.33□□□□□ -2.2
CCDC138Q96M89 AC090821.2-201ENST00000523552 176 ntBASIC1.33□□□□□ -2.2
CCDC138Q96M89 AC141273.2-201ENST00000618989 130 ntBASIC1.33□□□□□ -2.2
CCDC138Q96M89 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CCDC138Q96M89 AC008163.1-202ENST00000636004 2889 ntBASIC1.32□□□□□ -2.2
CCDC138Q96M89 RNU6-379P-201ENST00000363813 104 ntBASIC1.32□□□□□ -2.2
CCDC138Q96M89 RNU1-124P-201ENST00000363861 145 ntBASIC1.32□□□□□ -2.2
CCDC138Q96M89 SNORA27-201ENST00000384323 126 ntBASIC1.32□□□□□ -2.2
CCDC138Q96M89 Y_RNA.515-201ENST00000384535 112 ntBASIC1.32□□□□□ -2.2
CCDC138Q96M89 MIR19B1-201ENST00000384829 87 ntBASIC1.32□□□□□ -2.2
CCDC138Q96M89 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC138Q96M89 AL392103.1-201ENST00000447000 198 ntBASIC1.32□□□□□ -2.2
CCDC138Q96M89 SNORD36C-201ENST00000516733 66 ntBASIC1.32□□□□□ -2.2
CCDC138Q96M89 RNU1-92P-201ENST00000517017 135 ntBASIC1.32□□□□□ -2.2
CCDC138Q96M89 AP000942.4-201ENST00000604811 241 ntBASIC1.32□□□□□ -2.2
CCDC138Q96M89 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC138Q96M89 RNU6-392P-201ENST00000364926 101 ntBASIC1.31□□□□□ -2.2
CCDC138Q96M89 Y_RNA.330-201ENST00000365230 109 ntBASIC1.31□□□□□ -2.2
CCDC138Q96M89 RNU6-1189P-201ENST00000383958 107 ntBASIC1.31□□□□□ -2.2
CCDC138Q96M89 Y_RNA.542-201ENST00000384641 111 ntBASIC1.31□□□□□ -2.2
CCDC138Q96M89 Y_RNA.552-201ENST00000384665 112 ntBASIC1.31□□□□□ -2.2
CCDC138Q96M89 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
CCDC138Q96M89 RNU6-918P-201ENST00000391219 106 ntBASIC1.31□□□□□ -2.2
CCDC138Q96M89 MRPL35P3-201ENST00000421557 364 ntBASIC1.31□□□□□ -2.2
CCDC138Q96M89 snoU13.16-201ENST00000459350 104 ntBASIC1.31□□□□□ -2.2
CCDC138Q96M89 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC138Q96M89 MIR6515-201ENST00000619843 57 ntBASIC1.31□□□□□ -2.2
CCDC138Q96M89 RNU6-1020P-201ENST00000363684 107 ntBASIC1.3□□□□□ -2.2
CCDC138Q96M89 Y_RNA.435-201ENST00000384095 112 ntBASIC1.3□□□□□ -2.2
CCDC138Q96M89 SNORA1-201ENST00000384107 130 ntBASIC1.3□□□□□ -2.2
CCDC138Q96M89 MIR1302-7-201ENST00000408841 72 ntBASIC1.3□□□□□ -2.2
CCDC138Q96M89 RPS23P4-201ENST00000487908 423 ntBASIC1.3□□□□□ -2.2
CCDC138Q96M89 SNORD116-25-201ENST00000516517 92 ntBASIC1.3□□□□□ -2.2
CCDC138Q96M89 RNU6-958P-201ENST00000516995 106 ntBASIC1.3□□□□□ -2.2
CCDC138Q96M89 AC130289.1-201ENST00000577321 73 ntBASIC1.3□□□□□ -2.2
CCDC138Q96M89 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.3□□□□□ -2.2
CCDC138Q96M89 MIR548AO-201ENST00000579992 96 ntBASIC1.3□□□□□ -2.2
CCDC138Q96M89 MIR378D2-201ENST00000580636 98 ntBASIC1.3□□□□□ -2.2
CCDC138Q96M89 RNU6-275P-201ENST00000364910 107 ntBASIC1.29□□□□□ -2.2
CCDC138Q96M89 RNU6-396P-201ENST00000365369 105 ntBASIC1.29□□□□□ -2.2
CCDC138Q96M89 Y_RNA.374-201ENST00000365606 101 ntBASIC1.29□□□□□ -2.2
CCDC138Q96M89 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC138Q96M89 RNU1-123P-201ENST00000458950 160 ntBASIC1.29□□□□□ -2.2
CCDC138Q96M89 RPS29P24-201ENST00000486345 171 ntBASIC1.29□□□□□ -2.2
CCDC138Q96M89 RNU7-53P-201ENST00000516705 60 ntBASIC1.29□□□□□ -2.2
CCDC138Q96M89 MIR4421-201ENST00000578133 69 ntBASIC1.29□□□□□ -2.2
CCDC138Q96M89 Y_RNA.75-201ENST00000362927 97 ntBASIC1.28□□□□□ -2.2
CCDC138Q96M89 RNU6-1292P-201ENST00000383856 107 ntBASIC1.28□□□□□ -2.2
CCDC138Q96M89 SNORD77.3-201ENST00000391113 65 ntBASIC1.28□□□□□ -2.2
CCDC138Q96M89 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.28□□□□□ -2.2
CCDC138Q96M89 RN7SKP179-201ENST00000516126 217 ntBASIC1.28□□□□□ -2.2
CCDC138Q96M89 MIR2115-201ENST00000516657 100 ntBASIC1.28□□□□□ -2.2
CCDC138Q96M89 MIR3129-201ENST00000581095 76 ntBASIC1.28□□□□□ -2.2
CCDC138Q96M89 SNORA7.1-201ENST00000363750 139 ntBASIC1.27□□□□□ -2.21
CCDC138Q96M89 Y_RNA.412-201ENST00000384001 104 ntBASIC1.27□□□□□ -2.21
CCDC138Q96M89 RNU6-643P-201ENST00000384018 107 ntBASIC1.27□□□□□ -2.21
CCDC138Q96M89 Y_RNA.440-201ENST00000384120 114 ntBASIC1.27□□□□□ -2.21
CCDC138Q96M89 AL035398.1-201ENST00000430869 322 ntBASIC1.27□□□□□ -2.21
CCDC138Q96M89 RNU7-73P-201ENST00000458743 63 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms