Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 SNORD115-42-201ENST00000364273 82 ntBASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 SNORD115-15-201ENST00000364809 81 ntBASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 SNORD115-1-201ENST00000364961 82 ntBASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 SNORD115-26-201ENST00000365067 82 ntBASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 SNORD115-10-201ENST00000365073 81 ntBASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 RNU6-580P-201ENST00000365159 107 ntBASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 SNORD115-43-201ENST00000365503 82 ntBASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 SNORD115-36-201ENST00000365629 82 ntBASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 SNORD105-201ENST00000386910 85 ntBASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 Y_RNA.587-201ENST00000391210 103 ntBASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 AC090844.1-201ENST00000422019 156 ntBASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 snoU13.21-201ENST00000459368 105 ntBASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 SERF1AP1-201ENST00000514575 187 ntBASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 MIR4662B-201ENST00000579498 81 ntBASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 AP000753.3-201ENST00000604083 169 ntBASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 SNORD115-40-201ENST00000606510 82 ntBASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 Y_RNA.802-201ENST00000614892 130 ntBASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
RPGRIP1Q96KN7 RNU6-369P-201ENST00000362515 102 ntBASIC0.61□□□□□ -2.31
RPGRIP1Q96KN7 Y_RNA.376-201ENST00000365638 108 ntBASIC0.61□□□□□ -2.31
RPGRIP1Q96KN7 RNU1-119P-201ENST00000391122 165 ntBASIC0.61□□□□□ -2.31
RPGRIP1Q96KN7 AC244098.3-201ENST00000424803 96 ntBASIC0.61□□□□□ -2.31
RPGRIP1Q96KN7 AL731563.1-201ENST00000442202 214 ntBASIC0.61□□□□□ -2.31
RPGRIP1Q96KN7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.61□□□□□ -2.31
RPGRIP1Q96KN7 RNU7-67P-201ENST00000459003 62 ntBASIC0.61□□□□□ -2.31
RPGRIP1Q96KN7 snoU13.16-201ENST00000459350 104 ntBASIC0.61□□□□□ -2.31
RPGRIP1Q96KN7 RNU6-1338P-201ENST00000516328 91 ntBASIC0.61□□□□□ -2.31
RPGRIP1Q96KN7 SCARNA24.2-201ENST00000516968 130 ntBASIC0.61□□□□□ -2.31
RPGRIP1Q96KN7 AC011195.1-201ENST00000578177 177 ntBASIC0.61□□□□□ -2.31
RPGRIP1Q96KN7 AC006006.1-201ENST00000603082 144 ntBASIC0.61□□□□□ -2.31
RPGRIP1Q96KN7 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
RPGRIP1Q96KN7 AC134878.1-201ENST00000619901 243 ntBASIC0.61□□□□□ -2.31
RPGRIP1Q96KN7 RNU6-797P-201ENST00000363101 109 ntBASIC0.6□□□□□ -2.31
RPGRIP1Q96KN7 Y_RNA.202-201ENST00000364083 110 ntBASIC0.6□□□□□ -2.31
RPGRIP1Q96KN7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
RPGRIP1Q96KN7 RNU6-211P-201ENST00000384047 107 ntBASIC0.6□□□□□ -2.31
RPGRIP1Q96KN7 Y_RNA.572-201ENST00000384757 98 ntBASIC0.6□□□□□ -2.31
RPGRIP1Q96KN7 MIR548A2-201ENST00000384956 97 ntBASIC0.6□□□□□ -2.31
RPGRIP1Q96KN7 MIR518F-201ENST00000384973 87 ntBASIC0.6□□□□□ -2.31
RPGRIP1Q96KN7 Y_RNA.604-201ENST00000410574 102 ntBASIC0.6□□□□□ -2.31
RPGRIP1Q96KN7 RNU6-938P-201ENST00000411285 103 ntBASIC0.6□□□□□ -2.31
RPGRIP1Q96KN7 AC087499.4-201ENST00000448505 178 ntBASIC0.6□□□□□ -2.31
RPGRIP1Q96KN7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.6□□□□□ -2.31
RPGRIP1Q96KN7 MIR4264-201ENST00000583520 66 ntBASIC0.6□□□□□ -2.31
RPGRIP1Q96KN7 AL356055.1-201ENST00000602528 446 ntBASIC0.6□□□□□ -2.31
RPGRIP1Q96KN7 AP000942.4-201ENST00000604811 241 ntBASIC0.6□□□□□ -2.31
RPGRIP1Q96KN7 MIR2909-201ENST00000617113 69 ntBASIC0.6□□□□□ -2.31
RPGRIP1Q96KN7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.6□□□□□ -2.31
RPGRIP1Q96KN7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
RPGRIP1Q96KN7 Y_RNA.24-201ENST00000362508 103 ntBASIC0.59□□□□□ -2.31
RPGRIP1Q96KN7 RNU6-1289P-201ENST00000384431 106 ntBASIC0.59□□□□□ -2.31
RPGRIP1Q96KN7 RNU6-1203P-201ENST00000410703 110 ntBASIC0.59□□□□□ -2.31
RPGRIP1Q96KN7 AC244023.1-201ENST00000426884 112 ntBASIC0.59□□□□□ -2.31
RPGRIP1Q96KN7 RNU6-693P-201ENST00000516134 107 ntBASIC0.59□□□□□ -2.31
RPGRIP1Q96KN7 SNORA18.4-201ENST00000516440 124 ntBASIC0.59□□□□□ -2.31
RPGRIP1Q96KN7 RNA5SP476-201ENST00000516613 103 ntBASIC0.59□□□□□ -2.31
RPGRIP1Q96KN7 RNU6-958P-201ENST00000516995 106 ntBASIC0.59□□□□□ -2.31
RPGRIP1Q96KN7 AP003484.1-201ENST00000530974 250 ntBASIC0.59□□□□□ -2.31
RPGRIP1Q96KN7 MIR5688-201ENST00000580619 83 ntBASIC0.59□□□□□ -2.31
RPGRIP1Q96KN7 AC242498.1-201ENST00000604134 111 ntBASIC0.59□□□□□ -2.31
RPGRIP1Q96KN7 Y_RNA.37-201ENST00000362606 108 ntBASIC0.58□□□□□ -2.32
RPGRIP1Q96KN7 Y_RNA.229-201ENST00000364347 113 ntBASIC0.58□□□□□ -2.32
RPGRIP1Q96KN7 Y_RNA.275-201ENST00000364726 110 ntBASIC0.58□□□□□ -2.32
RPGRIP1Q96KN7 SNORD61-201ENST00000384252 73 ntBASIC0.58□□□□□ -2.32
RPGRIP1Q96KN7 SNORA8.3-201ENST00000384679 139 ntBASIC0.58□□□□□ -2.32
RPGRIP1Q96KN7 RNU6-985P-201ENST00000410182 104 ntBASIC0.58□□□□□ -2.32
RPGRIP1Q96KN7 SNORD83.1-201ENST00000411362 77 ntBASIC0.58□□□□□ -2.32
RPGRIP1Q96KN7 MTCYBP6-201ENST00000441810 138 ntBASIC0.58□□□□□ -2.32
RPGRIP1Q96KN7 Y_RNA.701-201ENST00000516812 110 ntBASIC0.58□□□□□ -2.32
RPGRIP1Q96KN7 RNU6-570P-201ENST00000517051 105 ntBASIC0.58□□□□□ -2.32
RPGRIP1Q96KN7 RNU6-1270P-201ENST00000517128 108 ntBASIC0.58□□□□□ -2.32
RPGRIP1Q96KN7 AC100767.1-201ENST00000528178 123 ntBASIC0.58□□□□□ -2.32
RPGRIP1Q96KN7 AC243829.6-201ENST00000612652 106 ntBASIC0.58□□□□□ -2.32
RPGRIP1Q96KN7 Y_RNA.117-201ENST00000363294 101 ntBASIC0.57□□□□□ -2.32
RPGRIP1Q96KN7 SNORA33.2-201ENST00000365413 134 ntBASIC0.57□□□□□ -2.32
RPGRIP1Q96KN7 SNORD24-201ENST00000383884 75 ntBASIC0.57□□□□□ -2.32
RPGRIP1Q96KN7 RNU6-913P-201ENST00000390913 95 ntBASIC0.57□□□□□ -2.32
RPGRIP1Q96KN7 SNORA40.5-201ENST00000391061 128 ntBASIC0.57□□□□□ -2.32
RPGRIP1Q96KN7 RNU2-70P-201ENST00000410718 179 ntBASIC0.57□□□□□ -2.32
RPGRIP1Q96KN7 AC113618.1-201ENST00000416747 285 ntBASIC0.57□□□□□ -2.32
RPGRIP1Q96KN7 AC015818.7-201ENST00000428754 109 ntBASIC0.57□□□□□ -2.32
RPGRIP1Q96KN7 AC087499.7-201ENST00000441958 109 ntBASIC0.57□□□□□ -2.32
RPGRIP1Q96KN7 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
RPGRIP1Q96KN7 RNU6-365P-201ENST00000517113 106 ntBASIC0.57□□□□□ -2.32
RPGRIP1Q96KN7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.57□□□□□ -2.32
RPGRIP1Q96KN7 Y_RNA.280-201ENST00000364765 112 ntBASIC0.56□□□□□ -2.32
RPGRIP1Q96KN7 RNU6-934P-201ENST00000365154 107 ntBASIC0.56□□□□□ -2.32
RPGRIP1Q96KN7 SNORA27-201ENST00000384323 126 ntBASIC0.56□□□□□ -2.32
RPGRIP1Q96KN7 RNU6-35P-201ENST00000384530 107 ntBASIC0.56□□□□□ -2.32
RPGRIP1Q96KN7 MIR626-201ENST00000385032 94 ntBASIC0.56□□□□□ -2.32
RPGRIP1Q96KN7 RNA5SP222-201ENST00000411039 105 ntBASIC0.56□□□□□ -2.32
RPGRIP1Q96KN7 RNU7-73P-201ENST00000458743 63 ntBASIC0.56□□□□□ -2.32
RPGRIP1Q96KN7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.56□□□□□ -2.32
RPGRIP1Q96KN7 RNU6-126P-201ENST00000516685 103 ntBASIC0.56□□□□□ -2.32
RPGRIP1Q96KN7 SNORD36C-201ENST00000516733 66 ntBASIC0.56□□□□□ -2.32
RPGRIP1Q96KN7 MIR4771-2-201ENST00000577758 74 ntBASIC0.56□□□□□ -2.32
RPGRIP1Q96KN7 MIR4514-201ENST00000581410 57 ntBASIC0.56□□□□□ -2.32
RPGRIP1Q96KN7 MIR4771-1-201ENST00000582617 74 ntBASIC0.56□□□□□ -2.32
RPGRIP1Q96KN7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.56□□□□□ -2.32
RPGRIP1Q96KN7 RNU6-888P-201ENST00000363010 101 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms