Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 RNY4P20-201ENST00000516678 93 ntBASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 RNU7-193P-201ENST00000516723 65 ntBASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 AC021506.2-201ENST00000612354 169 ntBASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 Y_RNA.494-201ENST00000384432 111 ntBASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 RNU6-997P-201ENST00000384725 107 ntBASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 AL445685.2-201ENST00000422551 342 ntBASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 RNU7-164P-201ENST00000459221 62 ntBASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 SUMO2P16-201ENST00000519475 264 ntBASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 HSPE1P19-201ENST00000603327 295 ntBASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
PDLIM2Q96JY6 MIR302B-201ENST00000362188 73 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-34-201ENST00000362441 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-12-201ENST00000362583 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-29-201ENST00000362834 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-9-201ENST00000362912 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-21-201ENST00000362963 81 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-14-201ENST00000363090 81 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-13-201ENST00000363358 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-41-201ENST00000363608 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-11-201ENST00000363616 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-5-201ENST00000363633 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-39-201ENST00000363694 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-4-201ENST00000363810 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-16-201ENST00000363887 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-6-201ENST00000363942 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 Y_RNA.198-201ENST00000364013 98 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-42-201ENST00000364273 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 RNU4-16P-201ENST00000364737 141 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-15-201ENST00000364809 81 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 Y_RNA.298-201ENST00000364960 107 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-1-201ENST00000364961 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-26-201ENST00000365067 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-10-201ENST00000365073 81 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-43-201ENST00000365503 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-36-201ENST00000365629 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 RNU6-147P-201ENST00000383983 107 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 MIR136-201ENST00000385207 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 MIR759-201ENST00000390224 91 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 RNA5SP450-201ENST00000411206 102 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 PGBD4P5-201ENST00000445958 426 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 AC107297.1-201ENST00000459991 176 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 RNU6-412P-201ENST00000516434 106 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORA31.25-201ENST00000517242 134 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 AC090821.2-201ENST00000523552 176 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 MIR3613-201ENST00000579844 87 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 AC078899.2-201ENST00000595282 212 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD115-40-201ENST00000606510 82 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 MIR6715A-201ENST00000615929 79 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 SNORD3E-202ENST00000627253 216 ntBASIC1.82□□□□□ -2.12
PDLIM2Q96JY6 Y_RNA.213-201ENST00000364178 111 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 RNA5SP100-201ENST00000410903 110 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 RNA5SP59-201ENST00000410922 110 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 RNU7-96P-201ENST00000459535 64 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 RPS29P24-201ENST00000486345 171 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 AC099513.1-201ENST00000490423 301 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 RNU6-998P-201ENST00000515894 101 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 MIR4529-201ENST00000578110 78 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 MIR3124-201ENST00000582636 67 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 MIR4305-201ENST00000583252 102 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 AC104984.5-201ENST00000586878 94 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 AL513423.1-201ENST00000621695 132 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 AP000648.3-201ENST00000623539 4507 ntBASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.81□□□□□ -2.12
PDLIM2Q96JY6 SNORA16B-201ENST00000364674 135 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 SNORA1.2-201ENST00000365189 134 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 Y_RNA.370-201ENST00000365589 108 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 Y_RNA.549-201ENST00000384657 102 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 MIR660-201ENST00000385235 97 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 SNORD12C-201ENST00000386307 89 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 AC019129.1-201ENST00000403786 261 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 AL035398.1-201ENST00000430869 322 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 RNU7-123P-201ENST00000515911 60 ntBASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
PDLIM2Q96JY6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 AL442644.1-201ENST00000454390 3105 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 Y_RNA.116-201ENST00000363292 103 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 RNY4P6-201ENST00000363667 96 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 RNU6-414P-201ENST00000363705 104 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 Y_RNA.281-201ENST00000364774 94 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 MIR1289-2-201ENST00000408360 111 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 RNU2-11P-201ENST00000459191 187 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 RNA5SP57-201ENST00000459463 123 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 SNORA31.17-201ENST00000516953 127 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 MIR4679-2-201ENST00000578358 77 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 uc_338.28-201ENST00000612082 187 ntBASIC1.79□□□□□ -2.12
PDLIM2Q96JY6 MIR450A1-201ENST00000362262 91 ntBASIC1.78□□□□□ -2.12
PDLIM2Q96JY6 SNORA63.5-201ENST00000363548 123 ntBASIC1.78□□□□□ -2.12
PDLIM2Q96JY6 RNU6-1107P-201ENST00000364817 104 ntBASIC1.78□□□□□ -2.12
PDLIM2Q96JY6 MIR526A1-201ENST00000384897 85 ntBASIC1.78□□□□□ -2.12
PDLIM2Q96JY6 AL031737.1-201ENST00000450125 223 ntBASIC1.78□□□□□ -2.12
PDLIM2Q96JY6 RNU7-67P-201ENST00000459003 62 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 224.2 ms