Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 SNORD115-13-201ENST00000363358 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-41-201ENST00000363608 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-11-201ENST00000363616 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-5-201ENST00000363633 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-39-201ENST00000363694 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-4-201ENST00000363810 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-16-201ENST00000363887 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-6-201ENST00000363942 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-42-201ENST00000364273 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-15-201ENST00000364809 81 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-1-201ENST00000364961 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-26-201ENST00000365067 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-10-201ENST00000365073 81 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-43-201ENST00000365503 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-36-201ENST00000365629 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 RNU6-1292P-201ENST00000383856 107 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 Y_RNA.547-201ENST00000384654 119 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 MIR499A-201ENST00000384903 122 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 MIR548A2-201ENST00000384956 97 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 U8.17-201ENST00000391292 132 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 RPS27P16-201ENST00000425758 201 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 Y_RNA.686-201ENST00000516548 134 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 AC019176.1-201ENST00000518519 225 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 AC112693.2-201ENST00000556538 232 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 MIR4498-201ENST00000577599 66 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 MIR548X2-201ENST00000579776 100 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 AC012493.3-201ENST00000604494 112 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-40-201ENST00000606510 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 AC015726.2-201ENST00000620112 122 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.21□□□□□ -2.06
ZNF428Q96B54 MTND1P7-201ENST00000632801 297 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 Y_RNA.261-201ENST00000364631 102 ntBASIC2.2□□□□□ -2.06
ZNF428Q96B54 RNU6-81P-201ENST00000365608 104 ntBASIC2.2□□□□□ -2.06
ZNF428Q96B54 Y_RNA.537-201ENST00000384626 109 ntBASIC2.2□□□□□ -2.06
ZNF428Q96B54 MIR516B2-201ENST00000385190 85 ntBASIC2.2□□□□□ -2.06
ZNF428Q96B54 BTF3P4-201ENST00000418852 495 ntBASIC2.2□□□□□ -2.06
ZNF428Q96B54 RNU4-57P-201ENST00000515980 135 ntBASIC2.2□□□□□ -2.06
ZNF428Q96B54 RNU6-693P-201ENST00000516134 107 ntBASIC2.2□□□□□ -2.06
ZNF428Q96B54 Y_RNA.666-201ENST00000516187 112 ntBASIC2.2□□□□□ -2.06
ZNF428Q96B54 RNU6-922P-201ENST00000516753 99 ntBASIC2.2□□□□□ -2.06
ZNF428Q96B54 MIR378D2-201ENST00000580636 98 ntBASIC2.2□□□□□ -2.06
ZNF428Q96B54 AC010332.2-201ENST00000613083 1904 ntBASIC2.2□□□□□ -2.06
ZNF428Q96B54 Y_RNA.116-201ENST00000363292 103 ntBASIC2.19□□□□□ -2.06
ZNF428Q96B54 SNORD50.2-201ENST00000365465 70 ntBASIC2.19□□□□□ -2.06
ZNF428Q96B54 Y_RNA.393-201ENST00000383936 102 ntBASIC2.19□□□□□ -2.06
ZNF428Q96B54 MIR520C-201ENST00000385005 87 ntBASIC2.19□□□□□ -2.06
ZNF428Q96B54 SNORD111.1-201ENST00000516421 86 ntBASIC2.19□□□□□ -2.06
ZNF428Q96B54 AL365205.2-201ENST00000594586 68 ntBASIC2.19□□□□□ -2.06
ZNF428Q96B54 MIR8065-201ENST00000620577 100 ntBASIC2.19□□□□□ -2.06
ZNF428Q96B54 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ZNF428Q96B54 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.18□□□□□ -2.06
ZNF428Q96B54 RNU6-1054P-201ENST00000411293 104 ntBASIC2.18□□□□□ -2.06
ZNF428Q96B54 RNU6-1270P-201ENST00000517128 108 ntBASIC2.18□□□□□ -2.06
ZNF428Q96B54 DNAJC19P9-201ENST00000555084 351 ntBASIC2.18□□□□□ -2.06
ZNF428Q96B54 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
ZNF428Q96B54 U8.1-201ENST00000362843 134 ntBASIC2.17□□□□□ -2.06
ZNF428Q96B54 Y_RNA.337-201ENST00000365312 102 ntBASIC2.17□□□□□ -2.06
ZNF428Q96B54 SNORD61-201ENST00000384252 73 ntBASIC2.17□□□□□ -2.06
ZNF428Q96B54 Y_RNA.521-201ENST00000384560 114 ntBASIC2.17□□□□□ -2.06
ZNF428Q96B54 SNORA40.5-201ENST00000391061 128 ntBASIC2.17□□□□□ -2.06
ZNF428Q96B54 RNU7-25P-201ENST00000516544 62 ntBASIC2.17□□□□□ -2.06
ZNF428Q96B54 RN7SKP88-201ENST00000516847 250 ntBASIC2.17□□□□□ -2.06
ZNF428Q96B54 AL645939.4-201ENST00000604495 135 ntBASIC2.17□□□□□ -2.06
ZNF428Q96B54 7SK.8-201ENST00000612110 250 ntBASIC2.17□□□□□ -2.06
ZNF428Q96B54 7SK.11-201ENST00000615477 250 ntBASIC2.17□□□□□ -2.06
ZNF428Q96B54 7SK.13-201ENST00000622040 250 ntBASIC2.17□□□□□ -2.06
ZNF428Q96B54 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.16□□□□□ -2.06
ZNF428Q96B54 SNORA25.9-201ENST00000365087 128 ntBASIC2.16□□□□□ -2.06
ZNF428Q96B54 RNU6-597P-201ENST00000365620 102 ntBASIC2.16□□□□□ -2.06
ZNF428Q96B54 RNU6-959P-201ENST00000384671 107 ntBASIC2.16□□□□□ -2.06
ZNF428Q96B54 SNORD37.2-201ENST00000391075 66 ntBASIC2.16□□□□□ -2.06
ZNF428Q96B54 AL133373.1-201ENST00000497098 94 ntBASIC2.16□□□□□ -2.06
ZNF428Q96B54 SNORA18.7-201ENST00000516910 131 ntBASIC2.16□□□□□ -2.06
ZNF428Q96B54 MIR4764-201ENST00000580680 88 ntBASIC2.16□□□□□ -2.06
ZNF428Q96B54 AC091895.1-201ENST00000624494 256 ntBASIC2.16□□□□□ -2.06
ZNF428Q96B54 MIR6844-201ENST00000637122 62 ntBASIC2.16□□□□□ -2.06
ZNF428Q96B54 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
ZNF428Q96B54 Y_RNA.343-201ENST00000365354 112 ntBASIC2.15□□□□□ -2.07
ZNF428Q96B54 MIR518F-201ENST00000384973 87 ntBASIC2.15□□□□□ -2.07
ZNF428Q96B54 MIR548I2-201ENST00000408348 149 ntBASIC2.15□□□□□ -2.07
ZNF428Q96B54 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.15□□□□□ -2.07
ZNF428Q96B54 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.15□□□□□ -2.07
ZNF428Q96B54 SNORA31.4-201ENST00000516049 129 ntBASIC2.15□□□□□ -2.07
ZNF428Q96B54 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ZNF428Q96B54 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.14□□□□□ -2.07
ZNF428Q96B54 SNORA25.7-201ENST00000364375 127 ntBASIC2.14□□□□□ -2.07
ZNF428Q96B54 SNORA22C-201ENST00000384614 134 ntBASIC2.14□□□□□ -2.07
ZNF428Q96B54 RNU7-107P-201ENST00000459121 61 ntBASIC2.14□□□□□ -2.07
ZNF428Q96B54 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.14□□□□□ -2.07
ZNF428Q96B54 RNU11-2P-201ENST00000516898 142 ntBASIC2.14□□□□□ -2.07
ZNF428Q96B54 MIR3129-201ENST00000581095 76 ntBASIC2.14□□□□□ -2.07
ZNF428Q96B54 AP001485.1-201ENST00000604799 199 ntBASIC2.14□□□□□ -2.07
ZNF428Q96B54 MIR502-201ENST00000606349 86 ntBASIC2.14□□□□□ -2.07
ZNF428Q96B54 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ZNF428Q96B54 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ZNF428Q96B54 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ZNF428Q96B54 MIR378A-201ENST00000362177 66 ntBASIC2.13□□□□□ -2.07
ZNF428Q96B54 Y_RNA.37-201ENST00000362606 108 ntBASIC2.13□□□□□ -2.07
ZNF428Q96B54 RNU6-915P-201ENST00000364943 103 ntBASIC2.13□□□□□ -2.07
ZNF428Q96B54 RNU6-1211P-201ENST00000459179 105 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms