Protein–RNA interactions for Protein: Q969G2

LHX4, LIM/homeobox protein Lhx4, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4Q969G2 RNU7-73P-201ENST00000458743 63 ntBASIC0.59□□□□□ -2.31
LHX4Q969G2 SNORD2.1-201ENST00000458762 69 ntBASIC0.59□□□□□ -2.31
LHX4Q969G2 snoU13.21-201ENST00000459368 105 ntBASIC0.59□□□□□ -2.31
LHX4Q969G2 RNU6-958P-201ENST00000516995 106 ntBASIC0.59□□□□□ -2.31
LHX4Q969G2 RNU6-365P-201ENST00000517113 106 ntBASIC0.59□□□□□ -2.31
LHX4Q969G2 RNU6-1270P-201ENST00000517128 108 ntBASIC0.59□□□□□ -2.31
LHX4Q969G2 AP003484.1-201ENST00000530974 250 ntBASIC0.59□□□□□ -2.31
LHX4Q969G2 MIR4714-201ENST00000580728 77 ntBASIC0.59□□□□□ -2.31
LHX4Q969G2 AL590095.2-201ENST00000604136 117 ntBASIC0.59□□□□□ -2.31
LHX4Q969G2 U2.14-201ENST00000615943 113 ntBASIC0.59□□□□□ -2.31
LHX4Q969G2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.59□□□□□ -2.32
LHX4Q969G2 Y_RNA.82-201ENST00000363000 102 ntBASIC0.58□□□□□ -2.32
LHX4Q969G2 Y_RNA.92-201ENST00000363043 102 ntBASIC0.58□□□□□ -2.32
LHX4Q969G2 Y_RNA.235-201ENST00000364412 102 ntBASIC0.58□□□□□ -2.32
LHX4Q969G2 RNU6-740P-201ENST00000364734 105 ntBASIC0.58□□□□□ -2.32
LHX4Q969G2 Y_RNA.306-201ENST00000365015 102 ntBASIC0.58□□□□□ -2.32
LHX4Q969G2 Y_RNA.312-201ENST00000365089 102 ntBASIC0.58□□□□□ -2.32
LHX4Q969G2 Y_RNA.322-201ENST00000365151 102 ntBASIC0.58□□□□□ -2.32
LHX4Q969G2 SNORA27-201ENST00000384323 126 ntBASIC0.58□□□□□ -2.32
LHX4Q969G2 RNU6-713P-201ENST00000384761 107 ntBASIC0.58□□□□□ -2.32
LHX4Q969G2 AC244098.3-201ENST00000424803 96 ntBASIC0.58□□□□□ -2.32
LHX4Q969G2 AC244023.1-201ENST00000426884 112 ntBASIC0.58□□□□□ -2.32
LHX4Q969G2 Y_RNA.650-201ENST00000459002 102 ntBASIC0.58□□□□□ -2.32
LHX4Q969G2 SNORD36C-201ENST00000516733 66 ntBASIC0.58□□□□□ -2.32
LHX4Q969G2 Y_RNA.777-201ENST00000516982 102 ntBASIC0.58□□□□□ -2.32
LHX4Q969G2 Y_RNA.771-201ENST00000598668 102 ntBASIC0.58□□□□□ -2.32
LHX4Q969G2 AC242498.1-201ENST00000604134 111 ntBASIC0.58□□□□□ -2.32
LHX4Q969G2 Y_RNA.789-201ENST00000622480 102 ntBASIC0.58□□□□□ -2.32
LHX4Q969G2 Y_RNA.66-201ENST00000362862 102 ntBASIC0.57□□□□□ -2.32
LHX4Q969G2 RNY1-201ENST00000364228 113 ntBASIC0.57□□□□□ -2.32
LHX4Q969G2 RNU6-484P-201ENST00000384016 107 ntBASIC0.57□□□□□ -2.32
LHX4Q969G2 RNU6-913P-201ENST00000390913 95 ntBASIC0.57□□□□□ -2.32
LHX4Q969G2 RNU1-119P-201ENST00000391122 165 ntBASIC0.57□□□□□ -2.32
LHX4Q969G2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.57□□□□□ -2.32
LHX4Q969G2 RNU2-55P-201ENST00000411146 174 ntBASIC0.57□□□□□ -2.32
LHX4Q969G2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.57□□□□□ -2.32
LHX4Q969G2 RPS29P24-201ENST00000486345 171 ntBASIC0.57□□□□□ -2.32
LHX4Q969G2 RNU6-504P-201ENST00000516568 104 ntBASIC0.57□□□□□ -2.32
LHX4Q969G2 AC011195.1-201ENST00000578177 177 ntBASIC0.57□□□□□ -2.32
LHX4Q969G2 MIR335-201ENST00000362173 94 ntBASIC0.56□□□□□ -2.32
LHX4Q969G2 Y_RNA.512-201ENST00000384518 102 ntBASIC0.56□□□□□ -2.32
LHX4Q969G2 SNORA26-201ENST00000391286 122 ntBASIC0.56□□□□□ -2.32
LHX4Q969G2 RNU6-651P-201ENST00000411040 105 ntBASIC0.56□□□□□ -2.32
LHX4Q969G2 RNU6-1299P-201ENST00000516316 100 ntBASIC0.56□□□□□ -2.32
LHX4Q969G2 RNU7-53P-201ENST00000516705 60 ntBASIC0.56□□□□□ -2.32
LHX4Q969G2 AC004812.1-201ENST00000540773 146 ntBASIC0.56□□□□□ -2.32
LHX4Q969G2 MIR8055-201ENST00000610739 97 ntBASIC0.56□□□□□ -2.32
LHX4Q969G2 Z97988.1-201ENST00000637697 135 ntBASIC0.56□□□□□ -2.32
LHX4Q969G2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
LHX4Q969G2 Y_RNA.91-201ENST00000363042 107 ntBASIC0.55□□□□□ -2.32
LHX4Q969G2 Y_RNA.634-201ENST00000364811 113 ntBASIC0.55□□□□□ -2.32
LHX4Q969G2 RNU6-934P-201ENST00000365154 107 ntBASIC0.55□□□□□ -2.32
LHX4Q969G2 Y_RNA.422-201ENST00000384054 114 ntBASIC0.55□□□□□ -2.32
LHX4Q969G2 RNY3P5-201ENST00000384127 102 ntBASIC0.55□□□□□ -2.32
LHX4Q969G2 RNU6-733P-201ENST00000410759 104 ntBASIC0.55□□□□□ -2.32
LHX4Q969G2 SNORD83.1-201ENST00000411362 77 ntBASIC0.55□□□□□ -2.32
LHX4Q969G2 RNU7-62P-201ENST00000458856 62 ntBASIC0.55□□□□□ -2.32
LHX4Q969G2 RNA5SP153-201ENST00000516498 76 ntBASIC0.55□□□□□ -2.32
LHX4Q969G2 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
LHX4Q969G2 RNU6-635P-201ENST00000516651 102 ntBASIC0.55□□□□□ -2.32
LHX4Q969G2 AP003072.1-201ENST00000531740 145 ntBASIC0.55□□□□□ -2.32
LHX4Q969G2 AC097639.2-201ENST00000603159 172 ntBASIC0.55□□□□□ -2.32
LHX4Q969G2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.54□□□□□ -2.32
LHX4Q969G2 snoU2_19.4-201ENST00000364329 80 ntBASIC0.54□□□□□ -2.32
LHX4Q969G2 SNORA63C-201ENST00000364578 129 ntBASIC0.54□□□□□ -2.32
LHX4Q969G2 RNU1-133P-201ENST00000364867 167 ntBASIC0.54□□□□□ -2.32
LHX4Q969G2 Y_RNA.432-201ENST00000384087 111 ntBASIC0.54□□□□□ -2.32
LHX4Q969G2 MT-TT-201ENST00000387460 66 ntBASIC0.54□□□□□ -2.32
LHX4Q969G2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.54□□□□□ -2.32
LHX4Q969G2 RNU2-70P-201ENST00000410718 179 ntBASIC0.54□□□□□ -2.32
LHX4Q969G2 AF228730.3-201ENST00000436691 102 ntBASIC0.54□□□□□ -2.32
LHX4Q969G2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.54□□□□□ -2.32
LHX4Q969G2 RNU6-1132P-201ENST00000459214 107 ntBASIC0.54□□□□□ -2.32
LHX4Q969G2 MTATP8P1-201ENST00000467115 207 ntBASIC0.54□□□□□ -2.32
LHX4Q969G2 RNA5SP436-201ENST00000516020 115 ntBASIC0.54□□□□□ -2.32
LHX4Q969G2 Y_RNA.720-201ENST00000517166 92 ntBASIC0.54□□□□□ -2.32
LHX4Q969G2 AC004817.2-201ENST00000561794 651 ntBASIC0.54□□□□□ -2.32
LHX4Q969G2 MIR4771-2-201ENST00000577758 74 ntBASIC0.54□□□□□ -2.32
LHX4Q969G2 MIR4771-1-201ENST00000582617 74 ntBASIC0.54□□□□□ -2.32
LHX4Q969G2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.54□□□□□ -2.32
LHX4Q969G2 Y_RNA.483-201ENST00000384380 101 ntBASIC0.53□□□□□ -2.32
LHX4Q969G2 Y_RNA.518-201ENST00000384552 113 ntBASIC0.53□□□□□ -2.32
LHX4Q969G2 SNORD38B-201ENST00000384690 67 ntBASIC0.53□□□□□ -2.32
LHX4Q969G2 MIR616-201ENST00000385293 97 ntBASIC0.53□□□□□ -2.32
LHX4Q969G2 Y_RNA.622-201ENST00000411091 108 ntBASIC0.53□□□□□ -2.32
LHX4Q969G2 AC015818.7-201ENST00000428754 109 ntBASIC0.53□□□□□ -2.32
LHX4Q969G2 HMGN1P33-201ENST00000432945 451 ntBASIC0.53□□□□□ -2.32
LHX4Q969G2 AC087499.7-201ENST00000441958 109 ntBASIC0.53□□□□□ -2.32
LHX4Q969G2 SNRPGP8-201ENST00000454064 226 ntBASIC0.53□□□□□ -2.32
LHX4Q969G2 RNU7-96P-201ENST00000459535 64 ntBASIC0.53□□□□□ -2.32
LHX4Q969G2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.53□□□□□ -2.32
LHX4Q969G2 MIR4282-201ENST00000583613 67 ntBASIC0.53□□□□□ -2.32
LHX4Q969G2 uc_338.6-201ENST00000613544 171 ntBASIC0.53□□□□□ -2.32
LHX4Q969G2 MIR8062-201ENST00000621515 85 ntBASIC0.53□□□□□ -2.32
LHX4Q969G2 SNORD38B-202ENST00000625943 69 ntBASIC0.53□□□□□ -2.32
LHX4Q969G2 Y_RNA.304-201ENST00000365011 112 ntBASIC0.52□□□□□ -2.33
LHX4Q969G2 Y_RNA.410-201ENST00000383992 113 ntBASIC0.52□□□□□ -2.33
LHX4Q969G2 Y_RNA.461-201ENST00000384263 103 ntBASIC0.52□□□□□ -2.33
LHX4Q969G2 MIR520F-201ENST00000384824 87 ntBASIC0.52□□□□□ -2.33
LHX4Q969G2 MIR598-201ENST00000384868 97 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms