Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MTCO2P24-201ENST00000515611 426 ntBASIC0.32□□□□□ -2.36
PTP4A1Q93096 RNU6-1143P-201ENST00000516125 104 ntBASIC0.32□□□□□ -2.36
PTP4A1Q93096 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.32□□□□□ -2.36
PTP4A1Q93096 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.32□□□□□ -2.36
PTP4A1Q93096 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.32□□□□□ -2.36
PTP4A1Q93096 AC243829.6-201ENST00000612652 106 ntBASIC0.32□□□□□ -2.36
PTP4A1Q93096 RNU6-679P-201ENST00000391003 106 ntBASIC0.31□□□□□ -2.36
PTP4A1Q93096 SNORD100-201ENST00000408573 76 ntBASIC0.31□□□□□ -2.36
PTP4A1Q93096 RNU6-988P-201ENST00000519081 107 ntBASIC0.31□□□□□ -2.36
PTP4A1Q93096 AC007751.1-201ENST00000529260 376 ntBASIC0.31□□□□□ -2.36
PTP4A1Q93096 AP003733.2-201ENST00000529409 171 ntBASIC0.31□□□□□ -2.36
PTP4A1Q93096 MIR4711-201ENST00000578274 70 ntBASIC0.31□□□□□ -2.36
PTP4A1Q93096 AC090897.1-201ENST00000580909 226 ntBASIC0.31□□□□□ -2.36
PTP4A1Q93096 MIR369-201ENST00000362155 70 ntBASIC0.3□□□□□ -2.36
PTP4A1Q93096 Y_RNA.152-201ENST00000363578 100 ntBASIC0.3□□□□□ -2.36
PTP4A1Q93096 RNA5SP117-201ENST00000365294 118 ntBASIC0.3□□□□□ -2.36
PTP4A1Q93096 MT-TF-201ENST00000387314 71 ntBASIC0.3□□□□□ -2.36
PTP4A1Q93096 SNORD77.3-201ENST00000391113 65 ntBASIC0.3□□□□□ -2.36
PTP4A1Q93096 RNA5SP261-201ENST00000410536 106 ntBASIC0.3□□□□□ -2.36
PTP4A1Q93096 SNORA40.8-201ENST00000411034 126 ntBASIC0.3□□□□□ -2.36
PTP4A1Q93096 AL731563.1-201ENST00000442202 214 ntBASIC0.3□□□□□ -2.36
PTP4A1Q93096 snoU13.2-201ENST00000459201 104 ntBASIC0.3□□□□□ -2.36
PTP4A1Q93096 RNU7-185P-201ENST00000459215 60 ntBASIC0.3□□□□□ -2.36
PTP4A1Q93096 Y_RNA.631-201ENST00000459607 101 ntBASIC0.3□□□□□ -2.36
PTP4A1Q93096 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.3□□□□□ -2.36
PTP4A1Q93096 MIR6740-201ENST00000618268 113 ntBASIC0.3□□□□□ -2.36
PTP4A1Q93096 MIR6515-201ENST00000619843 57 ntBASIC0.3□□□□□ -2.36
PTP4A1Q93096 RNU6-888P-201ENST00000363010 101 ntBASIC0.29□□□□□ -2.36
PTP4A1Q93096 Y_RNA.410-201ENST00000383992 113 ntBASIC0.29□□□□□ -2.36
PTP4A1Q93096 SNORA8.3-201ENST00000384679 139 ntBASIC0.29□□□□□ -2.36
PTP4A1Q93096 RNU6-913P-201ENST00000390913 95 ntBASIC0.29□□□□□ -2.36
PTP4A1Q93096 RNA5SP193-201ENST00000410353 107 ntBASIC0.29□□□□□ -2.36
PTP4A1Q93096 RNA5SP436-201ENST00000516020 115 ntBASIC0.29□□□□□ -2.36
PTP4A1Q93096 SNORA27.4-201ENST00000516650 95 ntBASIC0.29□□□□□ -2.36
PTP4A1Q93096 RNU7-156P-201ENST00000517214 74 ntBASIC0.29□□□□□ -2.36
PTP4A1Q93096 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.29□□□□□ -2.36
PTP4A1Q93096 RNU6-450P-201ENST00000364654 107 ntBASIC0.28□□□□□ -2.36
PTP4A1Q93096 SNORD42.2-201ENST00000365570 69 ntBASIC0.28□□□□□ -2.36
PTP4A1Q93096 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
PTP4A1Q93096 MIR518A1-201ENST00000385068 85 ntBASIC0.28□□□□□ -2.36
PTP4A1Q93096 Y_RNA.645-201ENST00000391229 102 ntBASIC0.28□□□□□ -2.36
PTP4A1Q93096 MIR548I3-201ENST00000408378 149 ntBASIC0.28□□□□□ -2.36
PTP4A1Q93096 RNU2-55P-201ENST00000411146 174 ntBASIC0.28□□□□□ -2.36
PTP4A1Q93096 RPL39P25-201ENST00000449384 154 ntBASIC0.28□□□□□ -2.36
PTP4A1Q93096 RNU7-102P-201ENST00000458948 62 ntBASIC0.28□□□□□ -2.36
PTP4A1Q93096 AC022523.2-201ENST00000561045 150 ntBASIC0.28□□□□□ -2.36
PTP4A1Q93096 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.28□□□□□ -2.36
PTP4A1Q93096 AL589743.1-201ENST00000551932 2712 ntBASIC0.28□□□□□ -2.37
PTP4A1Q93096 Y_RNA.28-201ENST00000362554 111 ntBASIC0.27□□□□□ -2.37
PTP4A1Q93096 RNU6-1309P-201ENST00000363305 108 ntBASIC0.27□□□□□ -2.37
PTP4A1Q93096 Y_RNA.355-201ENST00000365462 98 ntBASIC0.27□□□□□ -2.37
PTP4A1Q93096 VTRNA1-3-201ENST00000365645 89 ntBASIC0.27□□□□□ -2.37
PTP4A1Q93096 Y_RNA.394-201ENST00000383942 103 ntBASIC0.27□□□□□ -2.37
PTP4A1Q93096 SNORD61-201ENST00000384252 73 ntBASIC0.27□□□□□ -2.37
PTP4A1Q93096 RNU6-662P-201ENST00000384253 104 ntBASIC0.27□□□□□ -2.37
PTP4A1Q93096 RNU6-602P-201ENST00000411155 105 ntBASIC0.27□□□□□ -2.37
PTP4A1Q93096 RNU6-938P-201ENST00000411285 103 ntBASIC0.27□□□□□ -2.37
PTP4A1Q93096 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
PTP4A1Q93096 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.27□□□□□ -2.37
PTP4A1Q93096 RNU6-1299P-201ENST00000516316 100 ntBASIC0.27□□□□□ -2.37
PTP4A1Q93096 RNU6-1270P-201ENST00000517128 108 ntBASIC0.27□□□□□ -2.37
PTP4A1Q93096 SNORD92-201ENST00000585078 85 ntBASIC0.27□□□□□ -2.37
PTP4A1Q93096 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.27□□□□□ -2.37
PTP4A1Q93096 MIR302B-201ENST00000362188 73 ntBASIC0.26□□□□□ -2.37
PTP4A1Q93096 RNU6-1099P-201ENST00000363533 107 ntBASIC0.26□□□□□ -2.37
PTP4A1Q93096 Y_RNA.276-201ENST00000364732 109 ntBASIC0.26□□□□□ -2.37
PTP4A1Q93096 RNU2-70P-201ENST00000410718 179 ntBASIC0.26□□□□□ -2.37
PTP4A1Q93096 RNU2-11P-201ENST00000459191 187 ntBASIC0.26□□□□□ -2.37
PTP4A1Q93096 snoU13.18-201ENST00000459483 104 ntBASIC0.26□□□□□ -2.37
PTP4A1Q93096 RNU6-863P-201ENST00000515989 104 ntBASIC0.26□□□□□ -2.37
PTP4A1Q93096 RNY3P15-201ENST00000516297 97 ntBASIC0.26□□□□□ -2.37
PTP4A1Q93096 Y_RNA.7-201ENST00000362352 102 ntBASIC0.25□□□□□ -2.37
PTP4A1Q93096 RNU6-770P-201ENST00000363929 105 ntBASIC0.25□□□□□ -2.37
PTP4A1Q93096 Y_RNA.217-201ENST00000364214 105 ntBASIC0.25□□□□□ -2.37
PTP4A1Q93096 RNU6-1189P-201ENST00000383958 107 ntBASIC0.25□□□□□ -2.37
PTP4A1Q93096 Y_RNA.641-201ENST00000459414 105 ntBASIC0.25□□□□□ -2.37
PTP4A1Q93096 RNU6-998P-201ENST00000515894 101 ntBASIC0.25□□□□□ -2.37
PTP4A1Q93096 SNORD36C-201ENST00000516733 66 ntBASIC0.25□□□□□ -2.37
PTP4A1Q93096 RNU6-448P-201ENST00000517052 107 ntBASIC0.25□□□□□ -2.37
PTP4A1Q93096 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.25□□□□□ -2.37
PTP4A1Q93096 Y_RNA.269-201ENST00000364685 89 ntBASIC0.24□□□□□ -2.37
PTP4A1Q93096 RNY3P14-201ENST00000384309 102 ntBASIC0.24□□□□□ -2.37
PTP4A1Q93096 MIR598-201ENST00000384868 97 ntBASIC0.24□□□□□ -2.37
PTP4A1Q93096 HMGN1P33-201ENST00000432945 451 ntBASIC0.24□□□□□ -2.37
PTP4A1Q93096 RNA5SP94-201ENST00000516917 108 ntBASIC0.24□□□□□ -2.37
PTP4A1Q93096 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
PTP4A1Q93096 snoU18.1-201ENST00000629629 71 ntBASIC0.24□□□□□ -2.37
PTP4A1Q93096 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.24□□□□□ -2.37
PTP4A1Q93096 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
PTP4A1Q93096 UBE2WP1-201ENST00000362030 340 ntBASIC0.23□□□□□ -2.37
PTP4A1Q93096 RNU6-349P-201ENST00000362402 107 ntBASIC0.23□□□□□ -2.37
PTP4A1Q93096 Y_RNA.19-201ENST00000362462 99 ntBASIC0.23□□□□□ -2.37
PTP4A1Q93096 RNY1-201ENST00000364228 113 ntBASIC0.23□□□□□ -2.37
PTP4A1Q93096 RNA5SP517-201ENST00000364724 117 ntBASIC0.23□□□□□ -2.37
PTP4A1Q93096 RNY3P5-201ENST00000384127 102 ntBASIC0.23□□□□□ -2.37
PTP4A1Q93096 Y_RNA.541-201ENST00000384640 113 ntBASIC0.23□□□□□ -2.37
PTP4A1Q93096 MIR548A2-201ENST00000384956 97 ntBASIC0.23□□□□□ -2.37
PTP4A1Q93096 MIR563-201ENST00000385080 79 ntBASIC0.23□□□□□ -2.37
PTP4A1Q93096 RNU6-469P-201ENST00000516253 101 ntBASIC0.23□□□□□ -2.37
PTP4A1Q93096 RNA5SP153-201ENST00000516498 76 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms