Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL451046.2-201ENST00000403074 277 ntBASIC1.66□□□□□ -2.14
ATG4AQ8WYN0 snoU13.9-201ENST00000458927 103 ntBASIC1.66□□□□□ -2.14
ATG4AQ8WYN0 AC107297.1-201ENST00000459991 176 ntBASIC1.66□□□□□ -2.14
ATG4AQ8WYN0 AC005908.1-201ENST00000468701 347 ntBASIC1.66□□□□□ -2.14
ATG4AQ8WYN0 RPS29P24-201ENST00000486345 171 ntBASIC1.66□□□□□ -2.14
ATG4AQ8WYN0 MIR3198-2-201ENST00000577868 80 ntBASIC1.66□□□□□ -2.14
ATG4AQ8WYN0 Y_RNA.757-201ENST00000578934 114 ntBASIC1.66□□□□□ -2.14
ATG4AQ8WYN0 MIR548AR-201ENST00000582191 57 ntBASIC1.66□□□□□ -2.14
ATG4AQ8WYN0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.66□□□□□ -2.14
ATG4AQ8WYN0 MIR302D-201ENST00000362275 68 ntBASIC1.65□□□□□ -2.15
ATG4AQ8WYN0 Y_RNA.494-201ENST00000384432 111 ntBASIC1.65□□□□□ -2.15
ATG4AQ8WYN0 RNU6-482P-201ENST00000391068 107 ntBASIC1.65□□□□□ -2.15
ATG4AQ8WYN0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.65□□□□□ -2.15
ATG4AQ8WYN0 RNU7-80P-201ENST00000459562 61 ntBASIC1.65□□□□□ -2.15
ATG4AQ8WYN0 RNU7-43P-201ENST00000516554 64 ntBASIC1.65□□□□□ -2.15
ATG4AQ8WYN0 RNU6-971P-201ENST00000516920 106 ntBASIC1.65□□□□□ -2.15
ATG4AQ8WYN0 MIR8063-201ENST00000621930 81 ntBASIC1.65□□□□□ -2.15
ATG4AQ8WYN0 U2.22-201ENST00000636441 106 ntBASIC1.65□□□□□ -2.15
ATG4AQ8WYN0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
ATG4AQ8WYN0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.65□□□□□ -2.15
ATG4AQ8WYN0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 RNA5SP99-201ENST00000364020 114 ntBASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 RNU6-309P-201ENST00000364573 106 ntBASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 Y_RNA.351-201ENST00000365436 96 ntBASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 SNORA70.7-201ENST00000384159 133 ntBASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 Y_RNA.454-201ENST00000384224 113 ntBASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 SNORA26.9-201ENST00000391322 122 ntBASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 RNU6-1211P-201ENST00000459179 105 ntBASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 Y_RNA.651-201ENST00000459380 103 ntBASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 RNU7-96P-201ENST00000459535 64 ntBASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 RNU6-998P-201ENST00000515894 101 ntBASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 RNU2-13P-201ENST00000515909 113 ntBASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 RNU7-70P-201ENST00000516941 66 ntBASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 MIR3121-201ENST00000579680 77 ntBASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 AL513534.2-201ENST00000603836 250 ntBASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 AL022345.2-201ENST00000606307 135 ntBASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 AL353997.5-201ENST00000618886 171 ntBASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ATG4AQ8WYN0 RNU6-508P-201ENST00000363231 103 ntBASIC1.63□□□□□ -2.15
ATG4AQ8WYN0 SNORD41-201ENST00000386967 70 ntBASIC1.63□□□□□ -2.15
ATG4AQ8WYN0 HSPE1P24-201ENST00000450782 238 ntBASIC1.63□□□□□ -2.15
ATG4AQ8WYN0 RNU6-922P-201ENST00000516753 99 ntBASIC1.63□□□□□ -2.15
ATG4AQ8WYN0 AC091932.4-201ENST00000623386 200 ntBASIC1.63□□□□□ -2.15
ATG4AQ8WYN0 WWP1P1-201ENST00000466609 2769 ntBASIC1.63□□□□□ -2.15
ATG4AQ8WYN0 Y_RNA.218-201ENST00000364218 104 ntBASIC1.62□□□□□ -2.15
ATG4AQ8WYN0 Y_RNA.280-201ENST00000364765 112 ntBASIC1.62□□□□□ -2.15
ATG4AQ8WYN0 RNU1-133P-201ENST00000364867 167 ntBASIC1.62□□□□□ -2.15
ATG4AQ8WYN0 Y_RNA.294-201ENST00000364916 102 ntBASIC1.62□□□□□ -2.15
ATG4AQ8WYN0 SNORA24-201ENST00000384096 131 ntBASIC1.62□□□□□ -2.15
ATG4AQ8WYN0 Y_RNA.537-201ENST00000384626 109 ntBASIC1.62□□□□□ -2.15
ATG4AQ8WYN0 RNU6-1067P-201ENST00000384752 107 ntBASIC1.62□□□□□ -2.15
ATG4AQ8WYN0 MIR320A-201ENST00000385302 82 ntBASIC1.62□□□□□ -2.15
ATG4AQ8WYN0 RNU6-113P-201ENST00000516653 101 ntBASIC1.62□□□□□ -2.15
ATG4AQ8WYN0 MIR4764-201ENST00000580680 88 ntBASIC1.62□□□□□ -2.15
ATG4AQ8WYN0 Y_RNA.114-201ENST00000363265 113 ntBASIC1.61□□□□□ -2.15
ATG4AQ8WYN0 SNORD1A-201ENST00000364968 72 ntBASIC1.61□□□□□ -2.15
ATG4AQ8WYN0 RNU6-1117P-201ENST00000384525 104 ntBASIC1.61□□□□□ -2.15
ATG4AQ8WYN0 MIR520C-201ENST00000385005 87 ntBASIC1.61□□□□□ -2.15
ATG4AQ8WYN0 MIR1323-201ENST00000408090 73 ntBASIC1.61□□□□□ -2.15
ATG4AQ8WYN0 SNX2P2-201ENST00000424553 323 ntBASIC1.61□□□□□ -2.15
ATG4AQ8WYN0 AL606753.1-201ENST00000427435 87 ntBASIC1.61□□□□□ -2.15
ATG4AQ8WYN0 RPS29P29-201ENST00000456396 171 ntBASIC1.61□□□□□ -2.15
ATG4AQ8WYN0 RNU5E-3P-201ENST00000515913 68 ntBASIC1.61□□□□□ -2.15
ATG4AQ8WYN0 SNORD111.1-201ENST00000516421 86 ntBASIC1.61□□□□□ -2.15
ATG4AQ8WYN0 AL357312.1-201ENST00000603879 298 ntBASIC1.61□□□□□ -2.15
ATG4AQ8WYN0 MIR4791-201ENST00000607666 84 ntBASIC1.61□□□□□ -2.15
ATG4AQ8WYN0 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.61□□□□□ -2.15
ATG4AQ8WYN0 AL596211.1-201ENST00000569873 2277 ntBASIC1.6□□□□□ -2.15
ATG4AQ8WYN0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
ATG4AQ8WYN0 MIR342-201ENST00000362212 99 ntBASIC1.6□□□□□ -2.15
ATG4AQ8WYN0 SNORD33-201ENST00000362761 85 ntBASIC1.6□□□□□ -2.15
ATG4AQ8WYN0 RNU6-80P-201ENST00000384195 107 ntBASIC1.6□□□□□ -2.15
ATG4AQ8WYN0 MIR570-201ENST00000384917 97 ntBASIC1.6□□□□□ -2.15
ATG4AQ8WYN0 AL035398.1-201ENST00000430869 322 ntBASIC1.6□□□□□ -2.15
ATG4AQ8WYN0 RNU7-67P-201ENST00000459003 62 ntBASIC1.6□□□□□ -2.15
ATG4AQ8WYN0 AC079140.2-201ENST00000506193 142 ntBASIC1.6□□□□□ -2.15
ATG4AQ8WYN0 AC008834.1-201ENST00000511612 175 ntBASIC1.6□□□□□ -2.15
ATG4AQ8WYN0 RNU7-53P-201ENST00000516705 60 ntBASIC1.6□□□□□ -2.15
ATG4AQ8WYN0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.6□□□□□ -2.15
ATG4AQ8WYN0 MIR502-201ENST00000606349 86 ntBASIC1.6□□□□□ -2.15
ATG4AQ8WYN0 AC243994.1-201ENST00000618627 109 ntBASIC1.6□□□□□ -2.15
ATG4AQ8WYN0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.6□□□□□ -2.15
ATG4AQ8WYN0 AC008133.2-201ENST00000624540 351 ntBASIC1.6□□□□□ -2.15
ATG4AQ8WYN0 Y_RNA.71-201ENST00000362892 104 ntBASIC1.59□□□□□ -2.15
ATG4AQ8WYN0 RNU6-647P-201ENST00000364243 107 ntBASIC1.59□□□□□ -2.15
ATG4AQ8WYN0 RNY1P6-201ENST00000384193 109 ntBASIC1.59□□□□□ -2.15
ATG4AQ8WYN0 SNORA51.10-201ENST00000384418 136 ntBASIC1.59□□□□□ -2.15
ATG4AQ8WYN0 AL158147.1-201ENST00000443970 75 ntBASIC1.59□□□□□ -2.15
ATG4AQ8WYN0 RNU2-11P-201ENST00000459191 187 ntBASIC1.59□□□□□ -2.15
ATG4AQ8WYN0 BX248123.2-201ENST00000606318 124 ntBASIC1.59□□□□□ -2.15
ATG4AQ8WYN0 GHRLOS.1-201ENST00000610995 70 ntBASIC1.59□□□□□ -2.15
ATG4AQ8WYN0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
ATG4AQ8WYN0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
ATG4AQ8WYN0 MIR302B-201ENST00000362188 73 ntBASIC1.58□□□□□ -2.16
ATG4AQ8WYN0 RNU6-349P-201ENST00000362402 107 ntBASIC1.58□□□□□ -2.16
ATG4AQ8WYN0 SNORD116-14-201ENST00000383894 92 ntBASIC1.58□□□□□ -2.16
ATG4AQ8WYN0 SNORD116-17-201ENST00000383929 92 ntBASIC1.58□□□□□ -2.16
ATG4AQ8WYN0 RNU6-22P-201ENST00000384355 107 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms