Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MIR4431-201ENST00000579990 94 ntBASIC1.2□□□□□ -2.22
SLC44A1Q8WWI5 MIR3671-201ENST00000580455 88 ntBASIC1.2□□□□□ -2.22
SLC44A1Q8WWI5 MIR378D2-201ENST00000580636 98 ntBASIC1.2□□□□□ -2.22
SLC44A1Q8WWI5 AL365205.2-201ENST00000594586 68 ntBASIC1.2□□□□□ -2.22
SLC44A1Q8WWI5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.2□□□□□ -2.22
SLC44A1Q8WWI5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SLC44A1Q8WWI5 RNA5SP327-201ENST00000362494 101 ntBASIC1.19□□□□□ -2.22
SLC44A1Q8WWI5 RNU6-1318P-201ENST00000365389 103 ntBASIC1.19□□□□□ -2.22
SLC44A1Q8WWI5 SNORA24-201ENST00000384096 131 ntBASIC1.19□□□□□ -2.22
SLC44A1Q8WWI5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.19□□□□□ -2.22
SLC44A1Q8WWI5 snoU13.25-201ENST00000458945 104 ntBASIC1.19□□□□□ -2.22
SLC44A1Q8WWI5 RNU6-1219P-201ENST00000516143 112 ntBASIC1.19□□□□□ -2.22
SLC44A1Q8WWI5 RNU6-947P-201ENST00000516264 106 ntBASIC1.19□□□□□ -2.22
SLC44A1Q8WWI5 SNORD116-25-201ENST00000516517 92 ntBASIC1.19□□□□□ -2.22
SLC44A1Q8WWI5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SLC44A1Q8WWI5 Y_RNA.240-201ENST00000364469 95 ntBASIC1.18□□□□□ -2.22
SLC44A1Q8WWI5 SNORA40.5-201ENST00000391061 128 ntBASIC1.18□□□□□ -2.22
SLC44A1Q8WWI5 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
SLC44A1Q8WWI5 AL591704.2-201ENST00000421658 181 ntBASIC1.18□□□□□ -2.22
SLC44A1Q8WWI5 AF228730.3-201ENST00000436691 102 ntBASIC1.18□□□□□ -2.22
SLC44A1Q8WWI5 SNORA31.4-201ENST00000516049 129 ntBASIC1.18□□□□□ -2.22
SLC44A1Q8WWI5 AP003716.2-201ENST00000528260 108 ntBASIC1.18□□□□□ -2.22
SLC44A1Q8WWI5 AP003484.1-201ENST00000530974 250 ntBASIC1.18□□□□□ -2.22
SLC44A1Q8WWI5 SNORA25.8-201ENST00000364831 128 ntBASIC1.17□□□□□ -2.22
SLC44A1Q8WWI5 RNU6-392P-201ENST00000364926 101 ntBASIC1.17□□□□□ -2.22
SLC44A1Q8WWI5 RNU6-1292P-201ENST00000383856 107 ntBASIC1.17□□□□□ -2.22
SLC44A1Q8WWI5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.17□□□□□ -2.22
SLC44A1Q8WWI5 AC107297.1-201ENST00000459991 176 ntBASIC1.17□□□□□ -2.22
SLC44A1Q8WWI5 RPS26P48-201ENST00000491713 339 ntBASIC1.17□□□□□ -2.22
SLC44A1Q8WWI5 SNORA31.2-201ENST00000516019 134 ntBASIC1.17□□□□□ -2.22
SLC44A1Q8WWI5 AC022559.1-201ENST00000520905 205 ntBASIC1.17□□□□□ -2.22
SLC44A1Q8WWI5 MIR4791-201ENST00000607666 84 ntBASIC1.17□□□□□ -2.22
SLC44A1Q8WWI5 AC004792.1-201ENST00000614523 137 ntBASIC1.17□□□□□ -2.22
SLC44A1Q8WWI5 MIR4251-201ENST00000635819 61 ntBASIC1.17□□□□□ -2.22
SLC44A1Q8WWI5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SLC44A1Q8WWI5 Y_RNA.241-201ENST00000364470 117 ntBASIC1.16□□□□□ -2.22
SLC44A1Q8WWI5 RNU6-53P-201ENST00000365367 106 ntBASIC1.16□□□□□ -2.22
SLC44A1Q8WWI5 RNU6-597P-201ENST00000365620 102 ntBASIC1.16□□□□□ -2.22
SLC44A1Q8WWI5 SNORA1-201ENST00000384107 130 ntBASIC1.16□□□□□ -2.22
SLC44A1Q8WWI5 SNORA70.7-201ENST00000384159 133 ntBASIC1.16□□□□□ -2.22
SLC44A1Q8WWI5 SNORA51.10-201ENST00000384418 136 ntBASIC1.16□□□□□ -2.22
SLC44A1Q8WWI5 SNORD77.3-201ENST00000391113 65 ntBASIC1.16□□□□□ -2.22
SLC44A1Q8WWI5 AC048334.1-201ENST00000477975 159 ntBASIC1.16□□□□□ -2.22
SLC44A1Q8WWI5 SNORA18.4-201ENST00000516440 124 ntBASIC1.16□□□□□ -2.22
SLC44A1Q8WWI5 SNORD36C-201ENST00000516733 66 ntBASIC1.16□□□□□ -2.22
SLC44A1Q8WWI5 PRELID3BP2-201ENST00000605362 201 ntBASIC1.16□□□□□ -2.22
SLC44A1Q8WWI5 AC091895.1-201ENST00000624494 256 ntBASIC1.16□□□□□ -2.22
SLC44A1Q8WWI5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SLC44A1Q8WWI5 RNU6-682P-201ENST00000363843 106 ntBASIC1.15□□□□□ -2.23
SLC44A1Q8WWI5 RNU6-1189P-201ENST00000383958 107 ntBASIC1.15□□□□□ -2.23
SLC44A1Q8WWI5 AC108059.2-201ENST00000434626 151 ntBASIC1.15□□□□□ -2.23
SLC44A1Q8WWI5 AC107027.2-201ENST00000512197 115 ntBASIC1.15□□□□□ -2.23
SLC44A1Q8WWI5 RNU6-182P-201ENST00000516970 105 ntBASIC1.15□□□□□ -2.23
SLC44A1Q8WWI5 AC090425.1-201ENST00000610007 140 ntBASIC1.15□□□□□ -2.23
SLC44A1Q8WWI5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.15□□□□□ -2.23
SLC44A1Q8WWI5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SLC44A1Q8WWI5 RNA5SP264-201ENST00000363115 107 ntBASIC1.14□□□□□ -2.23
SLC44A1Q8WWI5 Y_RNA.440-201ENST00000384120 114 ntBASIC1.14□□□□□ -2.23
SLC44A1Q8WWI5 SNORA27-201ENST00000384323 126 ntBASIC1.14□□□□□ -2.23
SLC44A1Q8WWI5 SNORD12-201ENST00000391002 90 ntBASIC1.14□□□□□ -2.23
SLC44A1Q8WWI5 RNU2-64P-201ENST00000411315 191 ntBASIC1.14□□□□□ -2.23
SLC44A1Q8WWI5 AC006461.1-201ENST00000412637 326 ntBASIC1.14□□□□□ -2.23
SLC44A1Q8WWI5 RNU11-2P-201ENST00000516898 142 ntBASIC1.14□□□□□ -2.23
SLC44A1Q8WWI5 MIR5197-201ENST00000583721 112 ntBASIC1.14□□□□□ -2.23
SLC44A1Q8WWI5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.14□□□□□ -2.23
SLC44A1Q8WWI5 AC243994.1-201ENST00000618627 109 ntBASIC1.14□□□□□ -2.23
SLC44A1Q8WWI5 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.14□□□□□ -2.23
SLC44A1Q8WWI5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
SLC44A1Q8WWI5 Y_RNA.441-201ENST00000384123 112 ntBASIC1.13□□□□□ -2.23
SLC44A1Q8WWI5 Y_RNA.494-201ENST00000384432 111 ntBASIC1.13□□□□□ -2.23
SLC44A1Q8WWI5 Y_RNA.508-201ENST00000384502 114 ntBASIC1.13□□□□□ -2.23
SLC44A1Q8WWI5 MIR624-201ENST00000385217 97 ntBASIC1.13□□□□□ -2.23
SLC44A1Q8WWI5 MIR518E-201ENST00000385252 88 ntBASIC1.13□□□□□ -2.23
SLC44A1Q8WWI5 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
SLC44A1Q8WWI5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.13□□□□□ -2.23
SLC44A1Q8WWI5 SEPT7P4-201ENST00000437076 306 ntBASIC1.13□□□□□ -2.23
SLC44A1Q8WWI5 RPS29P28-201ENST00000446439 141 ntBASIC1.13□□□□□ -2.23
SLC44A1Q8WWI5 AL392103.1-201ENST00000447000 198 ntBASIC1.13□□□□□ -2.23
SLC44A1Q8WWI5 RNU7-96P-201ENST00000459535 64 ntBASIC1.13□□□□□ -2.23
SLC44A1Q8WWI5 RPS29P24-201ENST00000486345 171 ntBASIC1.13□□□□□ -2.23
SLC44A1Q8WWI5 RNU7-40P-201ENST00000516397 64 ntBASIC1.13□□□□□ -2.23
SLC44A1Q8WWI5 RNU6-861P-201ENST00000516745 106 ntBASIC1.13□□□□□ -2.23
SLC44A1Q8WWI5 MIR3129-201ENST00000581095 76 ntBASIC1.13□□□□□ -2.23
SLC44A1Q8WWI5 AL022345.2-201ENST00000606307 135 ntBASIC1.13□□□□□ -2.23
SLC44A1Q8WWI5 MIR6078-201ENST00000611069 100 ntBASIC1.13□□□□□ -2.23
SLC44A1Q8WWI5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.12□□□□□ -2.23
SLC44A1Q8WWI5 Y_RNA.118-201ENST00000363300 101 ntBASIC1.12□□□□□ -2.23
SLC44A1Q8WWI5 RNU4-84P-201ENST00000364200 139 ntBASIC1.12□□□□□ -2.23
SLC44A1Q8WWI5 SNORA25.7-201ENST00000364375 127 ntBASIC1.12□□□□□ -2.23
SLC44A1Q8WWI5 Y_RNA.363-201ENST00000365529 113 ntBASIC1.12□□□□□ -2.23
SLC44A1Q8WWI5 Y_RNA.393-201ENST00000383936 102 ntBASIC1.12□□□□□ -2.23
SLC44A1Q8WWI5 MIR570-201ENST00000384917 97 ntBASIC1.12□□□□□ -2.23
SLC44A1Q8WWI5 RNA5SP127-201ENST00000411051 133 ntBASIC1.12□□□□□ -2.23
SLC44A1Q8WWI5 MTND5P15-201ENST00000434246 349 ntBASIC1.12□□□□□ -2.23
SLC44A1Q8WWI5 RNU7-73P-201ENST00000458743 63 ntBASIC1.12□□□□□ -2.23
SLC44A1Q8WWI5 snoU13.16-201ENST00000459350 104 ntBASIC1.12□□□□□ -2.23
SLC44A1Q8WWI5 Y_RNA.662-201ENST00000516028 97 ntBASIC1.12□□□□□ -2.23
SLC44A1Q8WWI5 SNORA70.22-201ENST00000517160 124 ntBASIC1.12□□□□□ -2.23
SLC44A1Q8WWI5 MTND1P7-201ENST00000632801 297 ntBASIC1.12□□□□□ -2.23
SLC44A1Q8WWI5 MIR376A2-201ENST00000636782 80 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms