Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SNORA70.22-201ENST00000517160 124 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 MIR4264-201ENST00000583520 66 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 RNA5SP264-201ENST00000363115 107 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.494-201ENST00000384432 111 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.512-201ENST00000384518 102 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 RNU6-205P-201ENST00000390858 107 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 RNU6-613P-201ENST00000410412 108 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.666-201ENST00000516187 112 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 MIR6740-201ENST00000618268 113 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.14-201ENST00000362415 103 ntBASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.54-201ENST00000362766 105 ntBASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 SNORD115-28-201ENST00000363931 81 ntBASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 SNORD27-201ENST00000363981 72 ntBASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 RNU6-694P-201ENST00000364071 147 ntBASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.202-201ENST00000364083 110 ntBASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.217-201ENST00000364214 105 ntBASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.276-201ENST00000364732 109 ntBASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.277-201ENST00000364754 102 ntBASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 SNORA2.2-201ENST00000365473 135 ntBASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 MIR1302-6-201ENST00000408466 90 ntBASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 RNU2-11P-201ENST00000459191 187 ntBASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.641-201ENST00000459414 105 ntBASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 RNU7-21P-201ENST00000459430 62 ntBASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 SNORD124-201ENST00000459577 104 ntBASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 AC004812.1-201ENST00000540773 146 ntBASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 AC087685.1-201ENST00000587507 141 ntBASIC0.51□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.66-201ENST00000362862 102 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 RNU6-654P-201ENST00000364373 107 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 SNORD113.3-201ENST00000364630 78 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 RNA5SP331-201ENST00000364986 107 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 RNU6-514P-201ENST00000384208 107 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 RNU6-1067P-201ENST00000384752 107 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 MIR605-201ENST00000385078 83 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 MIR100-201ENST00000385259 80 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 RNA5SP299-201ENST00000391203 116 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 RNA5SP496-201ENST00000391240 109 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.679-201ENST00000516416 91 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 RNU6-197P-201ENST00000516680 100 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 MIR342-201ENST00000362212 99 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 SNORD45.3-201ENST00000363836 72 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.199-201ENST00000364014 102 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 RNU1-119P-201ENST00000391122 165 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 SNORD2.1-201ENST00000458762 69 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 AC091959.1-201ENST00000495857 238 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 MIR4643-201ENST00000577473 78 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 AP000753.3-201ENST00000604083 169 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 MIR5087-201ENST00000635826 76 ntBASIC0.5□□□□□ -2.33
SHROOM3Q8TF72 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
SHROOM3Q8TF72 RNU6-364P-201ENST00000384387 107 ntBASIC0.49□□□□□ -2.33
SHROOM3Q8TF72 SNORA80D-201ENST00000384488 135 ntBASIC0.49□□□□□ -2.33
SHROOM3Q8TF72 MIR518F-201ENST00000384973 87 ntBASIC0.49□□□□□ -2.33
SHROOM3Q8TF72 SNORD111-201ENST00000408139 94 ntBASIC0.49□□□□□ -2.33
SHROOM3Q8TF72 SNORA79-201ENST00000408376 140 ntBASIC0.49□□□□□ -2.33
SHROOM3Q8TF72 RNU2-55P-201ENST00000411146 174 ntBASIC0.49□□□□□ -2.33
SHROOM3Q8TF72 RNU6-126P-201ENST00000516685 103 ntBASIC0.49□□□□□ -2.33
SHROOM3Q8TF72 snoU18.1-201ENST00000629629 71 ntBASIC0.49□□□□□ -2.33
SHROOM3Q8TF72 RNU6-268P-201ENST00000364174 107 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.229-201ENST00000364347 113 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.292-201ENST00000364904 97 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.293-201ENST00000364908 93 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.352-201ENST00000365439 102 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.376-201ENST00000365638 108 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.380-201ENST00000365663 111 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 SNORA27-201ENST00000384323 126 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 AL606845.1-201ENST00000404881 255 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 snoU13.16-201ENST00000459350 104 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 SCARNA15.1-201ENST00000516384 125 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 RNU6-365P-201ENST00000517113 106 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 AC106800.4-201ENST00000614905 153 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 U2.14-201ENST00000615943 113 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.350-201ENST00000365409 98 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.569-201ENST00000384749 103 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 RNU2-38P-201ENST00000410856 79 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 RNU6-847P-201ENST00000411115 108 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 RNU7-67P-201ENST00000459003 62 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 snoU13.2-201ENST00000459201 104 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 RPS29P24-201ENST00000486345 171 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 PDCD5P2-201ENST00000507570 312 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 RNU6-998P-201ENST00000515894 101 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 AP003716.2-201ENST00000528260 108 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 AC023827.1-201ENST00000569247 97 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 AC012433.1-201ENST00000588916 398 ntBASIC0.48□□□□□ -2.33
SHROOM3Q8TF72 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.47□□□□□ -2.33
SHROOM3Q8TF72 MIR367-201ENST00000362299 68 ntBASIC0.47□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.91-201ENST00000363042 107 ntBASIC0.47□□□□□ -2.33
SHROOM3Q8TF72 Y_RNA.176-201ENST00000363815 109 ntBASIC0.47□□□□□ -2.33
SHROOM3Q8TF72 RNU6-1138P-201ENST00000365359 106 ntBASIC0.47□□□□□ -2.33
SHROOM3Q8TF72 MIR520H-201ENST00000385126 88 ntBASIC0.47□□□□□ -2.33
SHROOM3Q8TF72 RNU6-493P-201ENST00000391321 108 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms