Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 Y_RNA.66-201ENST00000362862 102 ntBASIC0.6□□□□□ -2.31
TRAF3IP1Q8TDR0 Y_RNA.164-201ENST00000363709 102 ntBASIC0.6□□□□□ -2.31
TRAF3IP1Q8TDR0 Y_RNA.326-201ENST00000365176 113 ntBASIC0.6□□□□□ -2.31
TRAF3IP1Q8TDR0 MIR1302-6-201ENST00000408466 90 ntBASIC0.6□□□□□ -2.31
TRAF3IP1Q8TDR0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAF3IP1Q8TDR0 SNORD2.1-201ENST00000458762 69 ntBASIC0.6□□□□□ -2.31
TRAF3IP1Q8TDR0 RPS29P1-201ENST00000465274 159 ntBASIC0.6□□□□□ -2.31
TRAF3IP1Q8TDR0 RPS29P24-201ENST00000486345 171 ntBASIC0.6□□□□□ -2.31
TRAF3IP1Q8TDR0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 Y_RNA.191-201ENST00000363972 113 ntBASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 RNU6-1160P-201ENST00000384546 104 ntBASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 SNORD38B-201ENST00000384690 67 ntBASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 MT-TW-201ENST00000387382 68 ntBASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 MT-TT-201ENST00000387460 66 ntBASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 RNU6-913P-201ENST00000390913 95 ntBASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 snoU13.21-201ENST00000459368 105 ntBASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 RNU6-1299P-201ENST00000516316 100 ntBASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 RNA5SP153-201ENST00000516498 76 ntBASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 RNU6-1270P-201ENST00000517128 108 ntBASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 AC097639.2-201ENST00000603159 172 ntBASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 MIR8062-201ENST00000621515 85 ntBASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 SNORD38B-202ENST00000625943 69 ntBASIC0.59□□□□□ -2.31
TRAF3IP1Q8TDR0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.82-201ENST00000363000 102 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.92-201ENST00000363043 102 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.235-201ENST00000364412 102 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.306-201ENST00000365015 102 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.312-201ENST00000365089 102 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.322-201ENST00000365151 102 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.410-201ENST00000383992 113 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 RNU6-484P-201ENST00000384016 107 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.483-201ENST00000384380 101 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 MIR606-201ENST00000384851 96 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 MIR573-201ENST00000384964 99 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.590-201ENST00000410140 107 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.622-201ENST00000411091 108 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 RNU6-177P-201ENST00000411257 104 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 RNU7-62P-201ENST00000458856 62 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.650-201ENST00000459002 102 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.679-201ENST00000516416 91 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 SNORD36C-201ENST00000516733 66 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.777-201ENST00000516982 102 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.771-201ENST00000598668 102 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 U2.14-201ENST00000615943 113 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.789-201ENST00000622480 102 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 U6.104-201ENST00000637979 90 ntBASIC0.58□□□□□ -2.32
TRAF3IP1Q8TDR0 MIR335-201ENST00000362173 94 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 snoU2_19.4-201ENST00000364329 80 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 SNORA25.9-201ENST00000365087 128 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.461-201ENST00000384263 103 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 RNU2-70P-201ENST00000410718 179 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 SNORD83.1-201ENST00000411362 77 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 SNRPGP8-201ENST00000454064 226 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 RNU7-96P-201ENST00000459535 64 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 RNU6-977P-201ENST00000516411 103 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 MIR4452-201ENST00000583004 71 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 AC008737.2-201ENST00000599446 118 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.812-201ENST00000610788 101 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.784-201ENST00000613803 101 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.787-201ENST00000616522 101 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.780-201ENST00000617336 101 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.801-201ENST00000619005 101 ntBASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.122-201ENST00000363331 96 ntBASIC0.56□□□□□ -2.32
TRAF3IP1Q8TDR0 SNORA63-201ENST00000363450 132 ntBASIC0.56□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.634-201ENST00000364811 113 ntBASIC0.56□□□□□ -2.32
TRAF3IP1Q8TDR0 RNU4-45P-201ENST00000365469 141 ntBASIC0.56□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.574-201ENST00000384766 95 ntBASIC0.56□□□□□ -2.32
TRAF3IP1Q8TDR0 AL606845.1-201ENST00000404881 255 ntBASIC0.56□□□□□ -2.32
TRAF3IP1Q8TDR0 AF228730.3-201ENST00000436691 102 ntBASIC0.56□□□□□ -2.32
TRAF3IP1Q8TDR0 MIR18B-201ENST00000454574 71 ntBASIC0.56□□□□□ -2.32
TRAF3IP1Q8TDR0 RNU6-453P-201ENST00000516819 85 ntBASIC0.56□□□□□ -2.32
TRAF3IP1Q8TDR0 MIR4771-2-201ENST00000577758 74 ntBASIC0.56□□□□□ -2.32
TRAF3IP1Q8TDR0 MIR4714-201ENST00000580728 77 ntBASIC0.56□□□□□ -2.32
TRAF3IP1Q8TDR0 MIR4804-201ENST00000581683 73 ntBASIC0.56□□□□□ -2.32
TRAF3IP1Q8TDR0 MIR4771-1-201ENST00000582617 74 ntBASIC0.56□□□□□ -2.32
TRAF3IP1Q8TDR0 AL365265.1-201ENST00000621045 234 ntBASIC0.56□□□□□ -2.32
TRAF3IP1Q8TDR0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.91-201ENST00000363042 107 ntBASIC0.55□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.176-201ENST00000363815 109 ntBASIC0.55□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.199-201ENST00000364014 102 ntBASIC0.55□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.416-201ENST00000384014 113 ntBASIC0.55□□□□□ -2.32
TRAF3IP1Q8TDR0 Y_RNA.432-201ENST00000384087 111 ntBASIC0.55□□□□□ -2.32
TRAF3IP1Q8TDR0 MIR520F-201ENST00000384824 87 ntBASIC0.55□□□□□ -2.32
TRAF3IP1Q8TDR0 MIR520H-201ENST00000385126 88 ntBASIC0.55□□□□□ -2.32
TRAF3IP1Q8TDR0 RNA5SP222-201ENST00000411039 105 ntBASIC0.55□□□□□ -2.32
TRAF3IP1Q8TDR0 AL442663.2-201ENST00000554385 511 ntBASIC0.55□□□□□ -2.32
TRAF3IP1Q8TDR0 MIR4676-201ENST00000583078 72 ntBASIC0.55□□□□□ -2.32
TRAF3IP1Q8TDR0 MIR4282-201ENST00000583613 67 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 302.3 ms