Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RNU6-1336P-201ENST00000383886 109 ntBASIC1.99□□□□□ -2.09
SMC1BQ8NDV3 RNU6-1189P-201ENST00000383958 107 ntBASIC1.99□□□□□ -2.09
SMC1BQ8NDV3 SNORA67.6-201ENST00000391093 99 ntBASIC1.99□□□□□ -2.09
SMC1BQ8NDV3 RNA5SP489-201ENST00000410986 109 ntBASIC1.99□□□□□ -2.09
SMC1BQ8NDV3 AF228730.3-201ENST00000436691 102 ntBASIC1.99□□□□□ -2.09
SMC1BQ8NDV3 RNU6-346P-201ENST00000516288 111 ntBASIC1.99□□□□□ -2.09
SMC1BQ8NDV3 MIR3122-201ENST00000577243 73 ntBASIC1.99□□□□□ -2.09
SMC1BQ8NDV3 AC015688.6-201ENST00000577737 104 ntBASIC1.99□□□□□ -2.09
SMC1BQ8NDV3 MIR3198-2-201ENST00000577868 80 ntBASIC1.99□□□□□ -2.09
SMC1BQ8NDV3 MIR8063-201ENST00000621930 81 ntBASIC1.99□□□□□ -2.09
SMC1BQ8NDV3 Y_RNA.584-201ENST00000391090 114 ntBASIC1.98□□□□□ -2.09
SMC1BQ8NDV3 SNORD77.3-201ENST00000391113 65 ntBASIC1.98□□□□□ -2.09
SMC1BQ8NDV3 U8.17-201ENST00000391292 132 ntBASIC1.98□□□□□ -2.09
SMC1BQ8NDV3 AC107297.1-201ENST00000459991 176 ntBASIC1.98□□□□□ -2.09
SMC1BQ8NDV3 RNU4-57P-201ENST00000515980 135 ntBASIC1.98□□□□□ -2.09
SMC1BQ8NDV3 SNORA25.12-201ENST00000516202 82 ntBASIC1.98□□□□□ -2.09
SMC1BQ8NDV3 RNU6-1223P-201ENST00000517124 104 ntBASIC1.98□□□□□ -2.09
SMC1BQ8NDV3 AP003484.1-201ENST00000530974 250 ntBASIC1.98□□□□□ -2.09
SMC1BQ8NDV3 AC090049.2-201ENST00000550377 109 ntBASIC1.98□□□□□ -2.09
SMC1BQ8NDV3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.98□□□□□ -2.09
SMC1BQ8NDV3 AC131055.1-201ENST00000584626 316 ntBASIC1.98□□□□□ -2.09
SMC1BQ8NDV3 AL353770.2-201ENST00000620024 78 ntBASIC1.98□□□□□ -2.09
SMC1BQ8NDV3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.98□□□□□ -2.09
SMC1BQ8NDV3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SMC1BQ8NDV3 SNORD33-201ENST00000362761 85 ntBASIC1.97□□□□□ -2.09
SMC1BQ8NDV3 AL451046.2-201ENST00000403074 277 ntBASIC1.97□□□□□ -2.09
SMC1BQ8NDV3 HSPE1P24-201ENST00000450782 238 ntBASIC1.97□□□□□ -2.09
SMC1BQ8NDV3 RNU6-917P-201ENST00000516294 104 ntBASIC1.97□□□□□ -2.09
SMC1BQ8NDV3 SNORA18.7-201ENST00000516910 131 ntBASIC1.97□□□□□ -2.09
SMC1BQ8NDV3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.96□□□□□ -2.1
SMC1BQ8NDV3 MIR96-201ENST00000362288 78 ntBASIC1.96□□□□□ -2.1
SMC1BQ8NDV3 Y_RNA.241-201ENST00000364470 117 ntBASIC1.96□□□□□ -2.1
SMC1BQ8NDV3 SNORA16.1-201ENST00000364597 132 ntBASIC1.96□□□□□ -2.1
SMC1BQ8NDV3 SNORD18B-201ENST00000365659 72 ntBASIC1.96□□□□□ -2.1
SMC1BQ8NDV3 MIR653-201ENST00000385279 96 ntBASIC1.96□□□□□ -2.1
SMC1BQ8NDV3 RPL31P63-201ENST00000422565 375 ntBASIC1.96□□□□□ -2.1
SMC1BQ8NDV3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.96□□□□□ -2.1
SMC1BQ8NDV3 MIR5197-201ENST00000583721 112 ntBASIC1.96□□□□□ -2.1
SMC1BQ8NDV3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SMC1BQ8NDV3 RNU6-1067P-201ENST00000384752 107 ntBASIC1.95□□□□□ -2.1
SMC1BQ8NDV3 MIR569-201ENST00000385228 96 ntBASIC1.95□□□□□ -2.1
SMC1BQ8NDV3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.95□□□□□ -2.1
SMC1BQ8NDV3 SNORD123-201ENST00000459473 70 ntBASIC1.95□□□□□ -2.1
SMC1BQ8NDV3 SNORD36C-201ENST00000516733 66 ntBASIC1.95□□□□□ -2.1
SMC1BQ8NDV3 RNU7-181P-201ENST00000517234 74 ntBASIC1.95□□□□□ -2.1
SMC1BQ8NDV3 AL513534.2-201ENST00000603836 250 ntBASIC1.95□□□□□ -2.1
SMC1BQ8NDV3 MIR6078-201ENST00000611069 100 ntBASIC1.95□□□□□ -2.1
SMC1BQ8NDV3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-34-201ENST00000362441 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-12-201ENST00000362583 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-29-201ENST00000362834 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-9-201ENST00000362912 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-21-201ENST00000362963 81 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-14-201ENST00000363090 81 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-13-201ENST00000363358 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-41-201ENST00000363608 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-11-201ENST00000363616 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-5-201ENST00000363633 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-39-201ENST00000363694 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-4-201ENST00000363810 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-16-201ENST00000363887 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-6-201ENST00000363942 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-42-201ENST00000364273 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-15-201ENST00000364809 81 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-1-201ENST00000364961 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-26-201ENST00000365067 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-10-201ENST00000365073 81 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-43-201ENST00000365503 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-36-201ENST00000365629 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 RNU6-187P-201ENST00000384139 106 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 Y_RNA.497-201ENST00000384447 98 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORA40.5-201ENST00000391061 128 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 AL392103.1-201ENST00000447000 198 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 AC005908.1-201ENST00000468701 347 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORA74.3-201ENST00000517108 154 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD115-40-201ENST00000606510 82 ntBASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.94□□□□□ -2.1
SMC1BQ8NDV3 SNORD50.2-201ENST00000365465 70 ntBASIC1.93□□□□□ -2.1
SMC1BQ8NDV3 Y_RNA.370-201ENST00000365589 108 ntBASIC1.93□□□□□ -2.1
SMC1BQ8NDV3 RNU6-938P-201ENST00000411285 103 ntBASIC1.93□□□□□ -2.1
SMC1BQ8NDV3 MTATP6P21-201ENST00000440681 189 ntBASIC1.93□□□□□ -2.1
SMC1BQ8NDV3 AC079140.2-201ENST00000506193 142 ntBASIC1.93□□□□□ -2.1
SMC1BQ8NDV3 AC008834.1-201ENST00000511612 175 ntBASIC1.93□□□□□ -2.1
SMC1BQ8NDV3 RNU6-426P-201ENST00000516464 97 ntBASIC1.93□□□□□ -2.1
SMC1BQ8NDV3 RNU7-70P-201ENST00000516941 66 ntBASIC1.93□□□□□ -2.1
SMC1BQ8NDV3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.93□□□□□ -2.1
SMC1BQ8NDV3 AP001485.1-201ENST00000604799 199 ntBASIC1.93□□□□□ -2.1
SMC1BQ8NDV3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.93□□□□□ -2.1
SMC1BQ8NDV3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
SMC1BQ8NDV3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.92□□□□□ -2.1
SMC1BQ8NDV3 Y_RNA.52-201ENST00000362760 96 ntBASIC1.92□□□□□ -2.1
SMC1BQ8NDV3 RNU1-93P-201ENST00000364704 169 ntBASIC1.92□□□□□ -2.1
SMC1BQ8NDV3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.92□□□□□ -2.1
SMC1BQ8NDV3 Y_RNA.568-201ENST00000384742 113 ntBASIC1.92□□□□□ -2.1
SMC1BQ8NDV3 SNX2P2-201ENST00000424553 323 ntBASIC1.92□□□□□ -2.1
SMC1BQ8NDV3 RNU7-197P-201ENST00000458836 62 ntBASIC1.92□□□□□ -2.1
SMC1BQ8NDV3 RNU7-43P-201ENST00000516554 64 ntBASIC1.92□□□□□ -2.1
SMC1BQ8NDV3 Y_RNA.251-201ENST00000364551 99 ntBASIC1.91□□□□□ -2.1
SMC1BQ8NDV3 Y_RNA.420-201ENST00000384043 110 ntBASIC1.91□□□□□ -2.1
SMC1BQ8NDV3 SNORA70.7-201ENST00000384159 133 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms