Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 AL365205.2-201ENST00000594586 68 ntBASIC1.66□□□□□ -2.14
PRPF38AQ8NAV1 AC090425.1-201ENST00000610007 140 ntBASIC1.66□□□□□ -2.14
PRPF38AQ8NAV1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.66□□□□□ -2.14
PRPF38AQ8NAV1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
PRPF38AQ8NAV1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.65□□□□□ -2.15
PRPF38AQ8NAV1 MTND5P15-201ENST00000434246 349 ntBASIC1.65□□□□□ -2.15
PRPF38AQ8NAV1 snoU13.25-201ENST00000458945 104 ntBASIC1.65□□□□□ -2.15
PRPF38AQ8NAV1 RNU6-1219P-201ENST00000516143 112 ntBASIC1.65□□□□□ -2.15
PRPF38AQ8NAV1 AC090821.2-201ENST00000523552 176 ntBASIC1.65□□□□□ -2.15
PRPF38AQ8NAV1 MIR4791-201ENST00000607666 84 ntBASIC1.65□□□□□ -2.15
PRPF38AQ8NAV1 AC243994.1-201ENST00000618627 109 ntBASIC1.65□□□□□ -2.15
PRPF38AQ8NAV1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.65□□□□□ -2.15
PRPF38AQ8NAV1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
PRPF38AQ8NAV1 SNORA25.7-201ENST00000364375 127 ntBASIC1.64□□□□□ -2.15
PRPF38AQ8NAV1 SNORA27-201ENST00000384323 126 ntBASIC1.64□□□□□ -2.15
PRPF38AQ8NAV1 Y_RNA.521-201ENST00000384560 114 ntBASIC1.64□□□□□ -2.15
PRPF38AQ8NAV1 MIR320A-201ENST00000385302 82 ntBASIC1.64□□□□□ -2.15
PRPF38AQ8NAV1 AF228730.3-201ENST00000436691 102 ntBASIC1.64□□□□□ -2.15
PRPF38AQ8NAV1 RNU2-13P-201ENST00000515909 113 ntBASIC1.64□□□□□ -2.15
PRPF38AQ8NAV1 Y_RNA.662-201ENST00000516028 97 ntBASIC1.64□□□□□ -2.15
PRPF38AQ8NAV1 AC004792.1-201ENST00000614523 137 ntBASIC1.64□□□□□ -2.15
PRPF38AQ8NAV1 Y_RNA.240-201ENST00000364469 95 ntBASIC1.63□□□□□ -2.15
PRPF38AQ8NAV1 RNU6-392P-201ENST00000364926 101 ntBASIC1.63□□□□□ -2.15
PRPF38AQ8NAV1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.63□□□□□ -2.15
PRPF38AQ8NAV1 RPS29P29-201ENST00000456396 171 ntBASIC1.63□□□□□ -2.15
PRPF38AQ8NAV1 RPS26P48-201ENST00000491713 339 ntBASIC1.63□□□□□ -2.15
PRPF38AQ8NAV1 RNU7-53P-201ENST00000516705 60 ntBASIC1.63□□□□□ -2.15
PRPF38AQ8NAV1 SNORA70.22-201ENST00000517160 124 ntBASIC1.63□□□□□ -2.15
PRPF38AQ8NAV1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.63□□□□□ -2.15
PRPF38AQ8NAV1 AL022345.2-201ENST00000606307 135 ntBASIC1.63□□□□□ -2.15
PRPF38AQ8NAV1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
PRPF38AQ8NAV1 RNU6-978P-201ENST00000364371 103 ntBASIC1.62□□□□□ -2.15
PRPF38AQ8NAV1 Y_RNA.337-201ENST00000365312 102 ntBASIC1.62□□□□□ -2.15
PRPF38AQ8NAV1 RNU7-67P-201ENST00000459003 62 ntBASIC1.62□□□□□ -2.15
PRPF38AQ8NAV1 AC022559.1-201ENST00000520905 205 ntBASIC1.62□□□□□ -2.15
PRPF38AQ8NAV1 MIR3129-201ENST00000581095 76 ntBASIC1.62□□□□□ -2.15
PRPF38AQ8NAV1 AL157834.3-201ENST00000615543 103 ntBASIC1.62□□□□□ -2.15
PRPF38AQ8NAV1 MIR7974-201ENST00000615835 79 ntBASIC1.62□□□□□ -2.15
PRPF38AQ8NAV1 MIR8070-201ENST00000616510 88 ntBASIC1.62□□□□□ -2.15
PRPF38AQ8NAV1 AL353770.2-201ENST00000620024 78 ntBASIC1.62□□□□□ -2.15
PRPF38AQ8NAV1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PRPF38AQ8NAV1 RNA5SP264-201ENST00000363115 107 ntBASIC1.61□□□□□ -2.15
PRPF38AQ8NAV1 Y_RNA.226-201ENST00000364337 114 ntBASIC1.61□□□□□ -2.15
PRPF38AQ8NAV1 RNU6-597P-201ENST00000365620 102 ntBASIC1.61□□□□□ -2.15
PRPF38AQ8NAV1 SNORA24-201ENST00000384096 131 ntBASIC1.61□□□□□ -2.15
PRPF38AQ8NAV1 SNORA1-201ENST00000384107 130 ntBASIC1.61□□□□□ -2.15
PRPF38AQ8NAV1 RNU6-910P-201ENST00000390844 107 ntBASIC1.61□□□□□ -2.15
PRPF38AQ8NAV1 SNORD12-201ENST00000391002 90 ntBASIC1.61□□□□□ -2.15
PRPF38AQ8NAV1 RNU6-938P-201ENST00000411285 103 ntBASIC1.61□□□□□ -2.15
PRPF38AQ8NAV1 AC108059.2-201ENST00000434626 151 ntBASIC1.61□□□□□ -2.15
PRPF38AQ8NAV1 RNU7-96P-201ENST00000459535 64 ntBASIC1.61□□□□□ -2.15
PRPF38AQ8NAV1 RPS29P24-201ENST00000486345 171 ntBASIC1.61□□□□□ -2.15
PRPF38AQ8NAV1 SNORA18.4-201ENST00000516440 124 ntBASIC1.61□□□□□ -2.15
PRPF38AQ8NAV1 SNORD36C-201ENST00000516733 66 ntBASIC1.61□□□□□ -2.15
PRPF38AQ8NAV1 RNU11-2P-201ENST00000516898 142 ntBASIC1.61□□□□□ -2.15
PRPF38AQ8NAV1 MIR103A2-201ENST00000362154 78 ntBASIC1.6□□□□□ -2.15
PRPF38AQ8NAV1 SNORA25-201ENST00000384384 134 ntBASIC1.6□□□□□ -2.15
PRPF38AQ8NAV1 SNORA80D-201ENST00000384488 135 ntBASIC1.6□□□□□ -2.15
PRPF38AQ8NAV1 SNORD77.3-201ENST00000391113 65 ntBASIC1.6□□□□□ -2.15
PRPF38AQ8NAV1 RNA5SP127-201ENST00000411051 133 ntBASIC1.6□□□□□ -2.15
PRPF38AQ8NAV1 SEPT7P4-201ENST00000437076 306 ntBASIC1.6□□□□□ -2.15
PRPF38AQ8NAV1 snoU13.16-201ENST00000459350 104 ntBASIC1.6□□□□□ -2.15
PRPF38AQ8NAV1 PRELID3BP2-201ENST00000605362 201 ntBASIC1.6□□□□□ -2.15
PRPF38AQ8NAV1 SNORA25.8-201ENST00000364831 128 ntBASIC1.59□□□□□ -2.15
PRPF38AQ8NAV1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.59□□□□□ -2.15
PRPF38AQ8NAV1 Y_RNA.393-201ENST00000383936 102 ntBASIC1.59□□□□□ -2.15
PRPF38AQ8NAV1 MIR570-201ENST00000384917 97 ntBASIC1.59□□□□□ -2.15
PRPF38AQ8NAV1 MIR222-201ENST00000384992 110 ntBASIC1.59□□□□□ -2.15
PRPF38AQ8NAV1 RNU7-80P-201ENST00000459562 61 ntBASIC1.59□□□□□ -2.15
PRPF38AQ8NAV1 RNU6-861P-201ENST00000516745 106 ntBASIC1.59□□□□□ -2.15
PRPF38AQ8NAV1 MIR5197-201ENST00000583721 112 ntBASIC1.59□□□□□ -2.15
PRPF38AQ8NAV1 Y_RNA.440-201ENST00000384120 114 ntBASIC1.58□□□□□ -2.16
PRPF38AQ8NAV1 Y_RNA.454-201ENST00000384224 113 ntBASIC1.58□□□□□ -2.16
PRPF38AQ8NAV1 MIR624-201ENST00000385217 97 ntBASIC1.58□□□□□ -2.16
PRPF38AQ8NAV1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
PRPF38AQ8NAV1 RNU6-239P-201ENST00000390990 99 ntBASIC1.58□□□□□ -2.16
PRPF38AQ8NAV1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.58□□□□□ -2.16
PRPF38AQ8NAV1 AL591704.2-201ENST00000421658 181 ntBASIC1.58□□□□□ -2.16
PRPF38AQ8NAV1 AL035398.1-201ENST00000430869 322 ntBASIC1.58□□□□□ -2.16
PRPF38AQ8NAV1 AC027335.2-201ENST00000624030 375 ntBASIC1.58□□□□□ -2.16
PRPF38AQ8NAV1 MTND1P7-201ENST00000632801 297 ntBASIC1.58□□□□□ -2.16
PRPF38AQ8NAV1 RNU7-73P-201ENST00000458743 63 ntBASIC1.57□□□□□ -2.16
PRPF38AQ8NAV1 AP003716.2-201ENST00000528260 108 ntBASIC1.57□□□□□ -2.16
PRPF38AQ8NAV1 SNORA25.3-201ENST00000363205 127 ntBASIC1.56□□□□□ -2.16
PRPF38AQ8NAV1 MIR1287-201ENST00000408492 90 ntBASIC1.56□□□□□ -2.16
PRPF38AQ8NAV1 RNU6-958P-201ENST00000516995 106 ntBASIC1.56□□□□□ -2.16
PRPF38AQ8NAV1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
PRPF38AQ8NAV1 RNU6-682P-201ENST00000363843 106 ntBASIC1.55□□□□□ -2.16
PRPF38AQ8NAV1 RNU4-84P-201ENST00000364200 139 ntBASIC1.55□□□□□ -2.16
PRPF38AQ8NAV1 MIR150-201ENST00000385048 84 ntBASIC1.55□□□□□ -2.16
PRPF38AQ8NAV1 RNU6-1135P-201ENST00000411083 103 ntBASIC1.55□□□□□ -2.16
PRPF38AQ8NAV1 RNU6-998P-201ENST00000515894 101 ntBASIC1.55□□□□□ -2.16
PRPF38AQ8NAV1 SNORD79.1-201ENST00000516069 84 ntBASIC1.55□□□□□ -2.16
PRPF38AQ8NAV1 MIR2115-201ENST00000516657 100 ntBASIC1.55□□□□□ -2.16
PRPF38AQ8NAV1 RNU7-70P-201ENST00000516941 66 ntBASIC1.55□□□□□ -2.16
PRPF38AQ8NAV1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.55□□□□□ -2.16
PRPF38AQ8NAV1 MIR3646-201ENST00000578301 84 ntBASIC1.55□□□□□ -2.16
PRPF38AQ8NAV1 MIR302B-201ENST00000362188 73 ntBASIC1.54□□□□□ -2.16
PRPF38AQ8NAV1 RNU6-396P-201ENST00000365369 105 ntBASIC1.54□□□□□ -2.16
PRPF38AQ8NAV1 Y_RNA.351-201ENST00000365436 96 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms