Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNU6-53P-201ENST00000365367 106 ntBASIC1.19□□□□□ -2.22
BEST3Q8N1M1 RNU6-1318P-201ENST00000365389 103 ntBASIC1.19□□□□□ -2.22
BEST3Q8N1M1 SNORA51.10-201ENST00000384418 136 ntBASIC1.19□□□□□ -2.22
BEST3Q8N1M1 MIR758-201ENST00000390227 88 ntBASIC1.19□□□□□ -2.22
BEST3Q8N1M1 RNU6-938P-201ENST00000411285 103 ntBASIC1.19□□□□□ -2.22
BEST3Q8N1M1 AF228730.3-201ENST00000436691 102 ntBASIC1.19□□□□□ -2.22
BEST3Q8N1M1 RNU7-120P-201ENST00000459334 63 ntBASIC1.19□□□□□ -2.22
BEST3Q8N1M1 AC048334.1-201ENST00000477975 159 ntBASIC1.19□□□□□ -2.22
BEST3Q8N1M1 RNU2-13P-201ENST00000515909 113 ntBASIC1.19□□□□□ -2.22
BEST3Q8N1M1 RNU6-1219P-201ENST00000516143 112 ntBASIC1.19□□□□□ -2.22
BEST3Q8N1M1 AC022559.1-201ENST00000520905 205 ntBASIC1.19□□□□□ -2.22
BEST3Q8N1M1 AL365205.2-201ENST00000594586 68 ntBASIC1.19□□□□□ -2.22
BEST3Q8N1M1 MIR4791-201ENST00000607666 84 ntBASIC1.19□□□□□ -2.22
BEST3Q8N1M1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.19□□□□□ -2.22
BEST3Q8N1M1 MIR4251-201ENST00000635819 61 ntBASIC1.19□□□□□ -2.22
BEST3Q8N1M1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
BEST3Q8N1M1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
BEST3Q8N1M1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.18□□□□□ -2.22
BEST3Q8N1M1 SNORA25.9-201ENST00000365087 128 ntBASIC1.18□□□□□ -2.22
BEST3Q8N1M1 RNU6-1189P-201ENST00000383958 107 ntBASIC1.18□□□□□ -2.22
BEST3Q8N1M1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.18□□□□□ -2.22
BEST3Q8N1M1 MTND5P15-201ENST00000434246 349 ntBASIC1.18□□□□□ -2.22
BEST3Q8N1M1 RPS26P48-201ENST00000491713 339 ntBASIC1.18□□□□□ -2.22
BEST3Q8N1M1 AC090425.1-201ENST00000610007 140 ntBASIC1.18□□□□□ -2.22
BEST3Q8N1M1 AC243994.1-201ENST00000618627 109 ntBASIC1.18□□□□□ -2.22
BEST3Q8N1M1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.17□□□□□ -2.22
BEST3Q8N1M1 RNU6-978P-201ENST00000364371 103 ntBASIC1.17□□□□□ -2.22
BEST3Q8N1M1 RNU6-1292P-201ENST00000383856 107 ntBASIC1.17□□□□□ -2.22
BEST3Q8N1M1 SNORA1-201ENST00000384107 130 ntBASIC1.17□□□□□ -2.22
BEST3Q8N1M1 SNORA70.7-201ENST00000384159 133 ntBASIC1.17□□□□□ -2.22
BEST3Q8N1M1 MIR570-201ENST00000384917 97 ntBASIC1.17□□□□□ -2.22
BEST3Q8N1M1 MIR1287-201ENST00000408492 90 ntBASIC1.17□□□□□ -2.22
BEST3Q8N1M1 AC006461.1-201ENST00000412637 326 ntBASIC1.17□□□□□ -2.22
BEST3Q8N1M1 snoU13.25-201ENST00000458945 104 ntBASIC1.17□□□□□ -2.22
BEST3Q8N1M1 SNORA18.4-201ENST00000516440 124 ntBASIC1.17□□□□□ -2.22
BEST3Q8N1M1 SNORD36C-201ENST00000516733 66 ntBASIC1.17□□□□□ -2.22
BEST3Q8N1M1 RNU6-182P-201ENST00000516970 105 ntBASIC1.17□□□□□ -2.22
BEST3Q8N1M1 AC090821.2-201ENST00000523552 176 ntBASIC1.17□□□□□ -2.22
BEST3Q8N1M1 PRELID3BP2-201ENST00000605362 201 ntBASIC1.17□□□□□ -2.22
BEST3Q8N1M1 AC004792.1-201ENST00000614523 137 ntBASIC1.17□□□□□ -2.22
BEST3Q8N1M1 RNA5SP327-201ENST00000362494 101 ntBASIC1.16□□□□□ -2.22
BEST3Q8N1M1 RNA5SP264-201ENST00000363115 107 ntBASIC1.16□□□□□ -2.22
BEST3Q8N1M1 Y_RNA.240-201ENST00000364469 95 ntBASIC1.16□□□□□ -2.22
BEST3Q8N1M1 SNORA24-201ENST00000384096 131 ntBASIC1.16□□□□□ -2.22
BEST3Q8N1M1 SNORA27-201ENST00000384323 126 ntBASIC1.16□□□□□ -2.22
BEST3Q8N1M1 MIR150-201ENST00000385048 84 ntBASIC1.16□□□□□ -2.22
BEST3Q8N1M1 SNORD77.3-201ENST00000391113 65 ntBASIC1.16□□□□□ -2.22
BEST3Q8N1M1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.16□□□□□ -2.22
BEST3Q8N1M1 RPS29P29-201ENST00000456396 171 ntBASIC1.16□□□□□ -2.22
BEST3Q8N1M1 AC107027.2-201ENST00000512197 115 ntBASIC1.16□□□□□ -2.22
BEST3Q8N1M1 SNORA70.22-201ENST00000517160 124 ntBASIC1.16□□□□□ -2.22
BEST3Q8N1M1 MIR3129-201ENST00000581095 76 ntBASIC1.16□□□□□ -2.22
BEST3Q8N1M1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
BEST3Q8N1M1 SNORA25.7-201ENST00000364375 127 ntBASIC1.15□□□□□ -2.23
BEST3Q8N1M1 Y_RNA.357-201ENST00000365487 109 ntBASIC1.15□□□□□ -2.23
BEST3Q8N1M1 Y_RNA.494-201ENST00000384432 111 ntBASIC1.15□□□□□ -2.23
BEST3Q8N1M1 Y_RNA.521-201ENST00000384560 114 ntBASIC1.15□□□□□ -2.23
BEST3Q8N1M1 MIR499A-201ENST00000384903 122 ntBASIC1.15□□□□□ -2.23
BEST3Q8N1M1 RNU6-910P-201ENST00000390844 107 ntBASIC1.15□□□□□ -2.23
BEST3Q8N1M1 AC108059.2-201ENST00000434626 151 ntBASIC1.15□□□□□ -2.23
BEST3Q8N1M1 SEPT7P4-201ENST00000437076 306 ntBASIC1.15□□□□□ -2.23
BEST3Q8N1M1 RNU7-67P-201ENST00000459003 62 ntBASIC1.15□□□□□ -2.23
BEST3Q8N1M1 RPS29P24-201ENST00000486345 171 ntBASIC1.15□□□□□ -2.23
BEST3Q8N1M1 Y_RNA.662-201ENST00000516028 97 ntBASIC1.15□□□□□ -2.23
BEST3Q8N1M1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.15□□□□□ -2.23
BEST3Q8N1M1 AP003716.2-201ENST00000528260 108 ntBASIC1.15□□□□□ -2.23
BEST3Q8N1M1 AC068338.1-201ENST00000565567 176 ntBASIC1.15□□□□□ -2.23
BEST3Q8N1M1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
BEST3Q8N1M1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
BEST3Q8N1M1 MIR103A2-201ENST00000362154 78 ntBASIC1.14□□□□□ -2.23
BEST3Q8N1M1 RNU6-597P-201ENST00000365620 102 ntBASIC1.14□□□□□ -2.23
BEST3Q8N1M1 Y_RNA.440-201ENST00000384120 114 ntBASIC1.14□□□□□ -2.23
BEST3Q8N1M1 SNORA25-201ENST00000384384 134 ntBASIC1.14□□□□□ -2.23
BEST3Q8N1M1 SNORA80D-201ENST00000384488 135 ntBASIC1.14□□□□□ -2.23
BEST3Q8N1M1 snoU13.16-201ENST00000459350 104 ntBASIC1.14□□□□□ -2.23
BEST3Q8N1M1 RN7SKP179-201ENST00000516126 217 ntBASIC1.14□□□□□ -2.23
BEST3Q8N1M1 RNU6-861P-201ENST00000516745 106 ntBASIC1.14□□□□□ -2.23
BEST3Q8N1M1 RNU11-2P-201ENST00000516898 142 ntBASIC1.14□□□□□ -2.23
BEST3Q8N1M1 AL022345.2-201ENST00000606307 135 ntBASIC1.14□□□□□ -2.23
BEST3Q8N1M1 MTND1P7-201ENST00000632801 297 ntBASIC1.14□□□□□ -2.23
BEST3Q8N1M1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
BEST3Q8N1M1 MIR26B-201ENST00000362251 77 ntBASIC1.13□□□□□ -2.23
BEST3Q8N1M1 SNORA25.3-201ENST00000363205 127 ntBASIC1.13□□□□□ -2.23
BEST3Q8N1M1 RNU6-682P-201ENST00000363843 106 ntBASIC1.13□□□□□ -2.23
BEST3Q8N1M1 Y_RNA.337-201ENST00000365312 102 ntBASIC1.13□□□□□ -2.23
BEST3Q8N1M1 SNORD12-201ENST00000391002 90 ntBASIC1.13□□□□□ -2.23
BEST3Q8N1M1 MIR1276-201ENST00000408707 83 ntBASIC1.13□□□□□ -2.23
BEST3Q8N1M1 RNA5SP127-201ENST00000411051 133 ntBASIC1.13□□□□□ -2.23
BEST3Q8N1M1 AL591704.2-201ENST00000421658 181 ntBASIC1.13□□□□□ -2.23
BEST3Q8N1M1 RNU7-96P-201ENST00000459535 64 ntBASIC1.13□□□□□ -2.23
BEST3Q8N1M1 RNU7-53P-201ENST00000516705 60 ntBASIC1.13□□□□□ -2.23
BEST3Q8N1M1 AC019288.1-201ENST00000557918 224 ntBASIC1.13□□□□□ -2.23
BEST3Q8N1M1 MIR5197-201ENST00000583721 112 ntBASIC1.13□□□□□ -2.23
BEST3Q8N1M1 SNORA25.8-201ENST00000364831 128 ntBASIC1.12□□□□□ -2.23
BEST3Q8N1M1 Y_RNA.393-201ENST00000383936 102 ntBASIC1.12□□□□□ -2.23
BEST3Q8N1M1 MIR222-201ENST00000384992 110 ntBASIC1.12□□□□□ -2.23
BEST3Q8N1M1 MIR624-201ENST00000385217 97 ntBASIC1.12□□□□□ -2.23
BEST3Q8N1M1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
BEST3Q8N1M1 RNU6-239P-201ENST00000390990 99 ntBASIC1.12□□□□□ -2.23
BEST3Q8N1M1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 254.9 ms