Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MIR215-201ENST00000384858 110 ntBASIC0.23□□□□□ -2.37
CCDC65Q8IXS2 MIR518A1-201ENST00000385068 85 ntBASIC0.23□□□□□ -2.37
CCDC65Q8IXS2 RNU6-679P-201ENST00000391003 106 ntBASIC0.23□□□□□ -2.37
CCDC65Q8IXS2 MIR1252-201ENST00000408861 65 ntBASIC0.23□□□□□ -2.37
CCDC65Q8IXS2 RPS29P24-201ENST00000486345 171 ntBASIC0.23□□□□□ -2.37
CCDC65Q8IXS2 RNA5SP94-201ENST00000516917 108 ntBASIC0.23□□□□□ -2.37
CCDC65Q8IXS2 MIR4662B-201ENST00000579498 81 ntBASIC0.23□□□□□ -2.37
CCDC65Q8IXS2 AC078938.1-201ENST00000620993 318 ntBASIC0.23□□□□□ -2.37
CCDC65Q8IXS2 AC090971.5-201ENST00000621102 293 ntBASIC0.23□□□□□ -2.37
CCDC65Q8IXS2 MIR367-201ENST00000362299 68 ntBASIC0.22□□□□□ -2.37
CCDC65Q8IXS2 Y_RNA.269-201ENST00000364685 89 ntBASIC0.22□□□□□ -2.37
CCDC65Q8IXS2 Y_RNA.380-201ENST00000365663 111 ntBASIC0.22□□□□□ -2.37
CCDC65Q8IXS2 Y_RNA.419-201ENST00000384041 102 ntBASIC0.22□□□□□ -2.37
CCDC65Q8IXS2 Y_RNA.572-201ENST00000384757 98 ntBASIC0.22□□□□□ -2.37
CCDC65Q8IXS2 SNORD12C-201ENST00000386307 89 ntBASIC0.22□□□□□ -2.37
CCDC65Q8IXS2 MIR526A2-201ENST00000390198 65 ntBASIC0.22□□□□□ -2.37
CCDC65Q8IXS2 AF228730.3-201ENST00000436691 102 ntBASIC0.22□□□□□ -2.37
CCDC65Q8IXS2 MIR548S-201ENST00000581352 82 ntBASIC0.22□□□□□ -2.37
CCDC65Q8IXS2 snoU18.1-201ENST00000629629 71 ntBASIC0.22□□□□□ -2.37
CCDC65Q8IXS2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.21□□□□□ -2.38
CCDC65Q8IXS2 RNU6-326P-201ENST00000365480 107 ntBASIC0.21□□□□□ -2.38
CCDC65Q8IXS2 Y_RNA.394-201ENST00000383942 103 ntBASIC0.21□□□□□ -2.38
CCDC65Q8IXS2 SNORA40.8-201ENST00000411034 126 ntBASIC0.21□□□□□ -2.38
CCDC65Q8IXS2 ELOCP20-201ENST00000422460 345 ntBASIC0.21□□□□□ -2.38
CCDC65Q8IXS2 SNRPGP12-201ENST00000449481 213 ntBASIC0.21□□□□□ -2.38
CCDC65Q8IXS2 snoU13.18-201ENST00000459483 104 ntBASIC0.21□□□□□ -2.38
CCDC65Q8IXS2 Y_RNA.631-201ENST00000459607 101 ntBASIC0.21□□□□□ -2.38
CCDC65Q8IXS2 RNU7-53P-201ENST00000516705 60 ntBASIC0.21□□□□□ -2.38
CCDC65Q8IXS2 RNU7-156P-201ENST00000517214 74 ntBASIC0.21□□□□□ -2.38
CCDC65Q8IXS2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.21□□□□□ -2.38
CCDC65Q8IXS2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.21□□□□□ -2.38
CCDC65Q8IXS2 Y_RNA.26-201ENST00000362539 101 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 RNU6-1309P-201ENST00000363305 108 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 SNORD118-201ENST00000363593 134 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 Y_RNA.214-201ENST00000364201 112 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 Y_RNA.293-201ENST00000364908 93 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 RNU6-806P-201ENST00000365147 105 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 RNU6-1319P-201ENST00000390855 104 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 RNU6-747P-201ENST00000390928 104 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 RNU6-241P-201ENST00000391148 104 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 RNU6-447P-201ENST00000410293 104 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 RNU6-1118P-201ENST00000410382 104 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 RNU6-1076P-201ENST00000410397 104 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 RNU6-355P-201ENST00000410427 104 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 RNU6-791P-201ENST00000410467 104 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 RNU6-705P-201ENST00000410601 104 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 RNU6-1100P-201ENST00000410691 104 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 RNU6-860P-201ENST00000410860 104 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 RNU6-1217P-201ENST00000411276 104 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 RNU6-785P-201ENST00000411324 104 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 RNU6-998P-201ENST00000515894 101 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 RNU6-863P-201ENST00000515989 104 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 AC131281.1-201ENST00000522984 164 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 AC100767.1-201ENST00000528178 123 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 MIR4431-201ENST00000579990 94 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 MIR5688-201ENST00000580619 83 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 U6.90-201ENST00000614007 104 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 U6.70-201ENST00000620287 104 ntBASIC0.2□□□□□ -2.38
CCDC65Q8IXS2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.19□□□□□ -2.38
CCDC65Q8IXS2 SNORD114-23-201ENST00000363536 72 ntBASIC0.19□□□□□ -2.38
CCDC65Q8IXS2 SNORA1.1-201ENST00000364671 133 ntBASIC0.19□□□□□ -2.38
CCDC65Q8IXS2 RNU6-474P-201ENST00000384243 107 ntBASIC0.19□□□□□ -2.38
CCDC65Q8IXS2 MIR598-201ENST00000384868 97 ntBASIC0.19□□□□□ -2.38
CCDC65Q8IXS2 SNORA26.6-201ENST00000391256 115 ntBASIC0.19□□□□□ -2.38
CCDC65Q8IXS2 RPL21P38-201ENST00000418090 167 ntBASIC0.19□□□□□ -2.38
CCDC65Q8IXS2 SNORA25.12-201ENST00000516202 82 ntBASIC0.19□□□□□ -2.38
CCDC65Q8IXS2 SNORA27.4-201ENST00000516650 95 ntBASIC0.19□□□□□ -2.38
CCDC65Q8IXS2 RNU6-1270P-201ENST00000517128 108 ntBASIC0.19□□□□□ -2.38
CCDC65Q8IXS2 MIR3678-201ENST00000578455 94 ntBASIC0.19□□□□□ -2.38
CCDC65Q8IXS2 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.19□□□□□ -2.38
CCDC65Q8IXS2 Y_RNA.440-201ENST00000384120 114 ntBASIC0.18□□□□□ -2.38
CCDC65Q8IXS2 RNU6-364P-201ENST00000384387 107 ntBASIC0.18□□□□□ -2.38
CCDC65Q8IXS2 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
CCDC65Q8IXS2 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.18□□□□□ -2.38
CCDC65Q8IXS2 AL138752.1-201ENST00000452964 351 ntBASIC0.18□□□□□ -2.38
CCDC65Q8IXS2 RNU2-11P-201ENST00000459191 187 ntBASIC0.18□□□□□ -2.38
CCDC65Q8IXS2 RNU6-365P-201ENST00000517113 106 ntBASIC0.18□□□□□ -2.38
CCDC65Q8IXS2 AC022523.2-201ENST00000561045 150 ntBASIC0.18□□□□□ -2.38
CCDC65Q8IXS2 MIR4801-201ENST00000582704 82 ntBASIC0.18□□□□□ -2.38
CCDC65Q8IXS2 SNORA25.18-201ENST00000607153 114 ntBASIC0.18□□□□□ -2.38
CCDC65Q8IXS2 UBE2WP1-201ENST00000362030 340 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 RNU6-349P-201ENST00000362402 107 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 Y_RNA.16-201ENST00000362421 102 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 Y_RNA.28-201ENST00000362554 111 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 SNORA36.1-201ENST00000363424 132 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 Y_RNA.229-201ENST00000364347 113 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 RNU6-740P-201ENST00000364734 105 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 RNU6-484P-201ENST00000384016 107 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 SNORA8.2-201ENST00000384372 139 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 SNORD77.3-201ENST00000391113 65 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 MIR548I3-201ENST00000408378 149 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 MIR1257-201ENST00000408490 117 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 RNU7-96P-201ENST00000459535 64 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 AP003733.2-201ENST00000529409 171 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 Y_RNA.802-201ENST00000614892 130 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 Y_RNA.804-201ENST00000615262 101 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 243 ms